RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 TMEM140Q9NV12 185 aa8.6□□□□□ -1.03
LSM6-204ENST00000504181 CLEC2DQ9UHP7 191 aa8.6□□□□□ -1.03
LSM6-204ENST00000504181 POMPQ9Y244 141 aa8.6□□□□□ -1.03
LSM6-204ENST00000504181 KCNK7Q9Y2U2 307 aa8.6□□□□□ -1.03
LSM6-204ENST00000504181 ARL2BPQ9Y2Y0 163 aa8.6□□□□□ -1.03
LSM6-204ENST00000504181 GOLT1BQ9Y3E0 138 aa8.6□□□□□ -1.03
LSM6-204ENST00000504181 OR2W1Q9Y3N9 320 aa8.6□□□□□ -1.03
LSM6-204ENST00000504181 TNFRSF18Q9Y5U5 241 aa8.6□□□□□ -1.03
LSM6-204ENST00000504181 HLA-DRB4X5D2U9 266 aa8.6□□□□□ -1.03
LSM6-204ENST00000504181 KRTAP9-6A0A140TA67 174 aa8.59□□□□□ -1.03
LSM6-204ENST00000504181 A0A1B0GU03 582 aa8.59□□□□□ -1.03
LSM6-204ENST00000504181 I3L2K1 104 aa8.59□□□□□ -1.03
LSM6-204ENST00000504181 SLC22A5O76082 557 aa8.59□□□□□ -1.03
LSM6-204ENST00000504181 MAPK3P27361 379 aaPredicted RBP8.59□□□□□ -1.03
LSM6-204ENST00000504181 DEFB1P60022 68 aa8.59□□□□□ -1.03
LSM6-204ENST00000504181 ZNF600Q6ZNG1 722 aa8.59□□□□□ -1.03
LSM6-204ENST00000504181 SPAG16Q8N0X2 631 aa8.59□□□□□ -1.03
LSM6-204ENST00000504181 DMBX1Q8NFW5 382 aa8.59□□□□□ -1.03
LSM6-204ENST00000504181 OR1L8Q8NGR8 309 aa8.59□□□□□ -1.03
LSM6-204ENST00000504181 MOB3AQ96BX8 217 aa8.59□□□□□ -1.03
LSM6-204ENST00000504181 ORC6Q9Y5N6 252 aa8.59□□□□□ -1.03
LSM6-204ENST00000504181 MT-CO2P00403 227 aa8.58□□□□□ -1.04
LSM6-204ENST00000504181 ATP5G1P05496 136 aa8.58□□□□□ -1.04
LSM6-204ENST00000504181 ASIPP42127 132 aa8.58□□□□□ -1.04
LSM6-204ENST00000504181 ATP5G3P48201 142 aa8.58□□□□□ -1.04
LSM6-204ENST00000504181 TAS2R31P59538 309 aa8.58□□□□□ -1.04
LSM6-204ENST00000504181 ESRGQ1W209 222 aa8.58□□□□□ -1.04
LSM6-204ENST00000504181 ACSM3Q53FZ2 586 aa8.58□□□□□ -1.04
LSM6-204ENST00000504181 ZNF709Q8N972 641 aa8.58□□□□□ -1.04
LSM6-204ENST00000504181 OR56B1Q8NGI3 324 aa8.58□□□□□ -1.04
LSM6-204ENST00000504181 RHOXF1Q8NHV9 184 aa8.58□□□□□ -1.04
LSM6-204ENST00000504181 PINX1Q96BK5 328 aaKnown RBP8.58□□□□□ -1.04
LSM6-204ENST00000504181 RNF125Q96EQ8 232 aa8.58□□□□□ -1.04
LSM6-204ENST00000504181 SLC35B3Q9H1N7 401 aa8.58□□□□□ -1.04
LSM6-204ENST00000504181 DCSTAMPQ9H295 470 aa8.58□□□□□ -1.04
LSM6-204ENST00000504181 NDUFA4L2Q9NRX3 87 aa8.58□□□□□ -1.04
LSM6-204ENST00000504181 FAM30AQ9NZY2 134 aa8.58□□□□□ -1.04
LSM6-204ENST00000504181 MRPS16Q9Y3D3 137 aaKnown RBP8.58□□□□□ -1.04
LSM6-204ENST00000504181 A0A075B6Q4 140 aa8.57□□□□□ -1.04
LSM6-204ENST00000504181 LYRM9A8MSI8 78 aa8.57□□□□□ -1.04
LSM6-204ENST00000504181 FAM90A26D6RGX4 464 aa8.57□□□□□ -1.04
LSM6-204ENST00000504181 PRB4P10163 310 aaPredicted RBP8.57□□□□□ -1.04
LSM6-204ENST00000504181 NQO2P16083 231 aa8.57□□□□□ -1.04
LSM6-204ENST00000504181 PPP5CP53041 499 aa8.57□□□□□ -1.04
LSM6-204ENST00000504181 SNRPD3P62318 126 aaKnown RBP8.57□□□□□ -1.04
LSM6-204ENST00000504181 FCN2Q15485 313 aa8.57□□□□□ -1.04
LSM6-204ENST00000504181 SMN1Q16637 294 aaKnown RBP8.57□□□□□ -1.04
LSM6-204ENST00000504181 KCTD21Q4G0X4 260 aa8.57□□□□□ -1.04
LSM6-204ENST00000504181 FCGR1BQ92637 280 aa8.57□□□□□ -1.04
LSM6-204ENST00000504181 METTL26Q96S19 204 aa8.57□□□□□ -1.04
LSM6-204ENST00000504181 MAGT1Q9H0U3 335 aa8.57□□□□□ -1.04
LSM6-204ENST00000504181 PRM2P04554 102 aa8.56□□□□□ -1.04
LSM6-204ENST00000504181 ALPLP05186 524 aa8.56□□□□□ -1.04
LSM6-204ENST00000504181 MYL12AP19105 171 aa8.56□□□□□ -1.04
LSM6-204ENST00000504181 CRYBB3P26998 211 aa8.56□□□□□ -1.04
LSM6-204ENST00000504181 POU2AF1Q16633 256 aa8.56□□□□□ -1.04
LSM6-204ENST00000504181 OR1P1Q8NH06 330 aa8.56□□□□□ -1.04
LSM6-204ENST00000504181 APH1BQ8WW43 257 aa8.56□□□□□ -1.04
LSM6-204ENST00000504181 RAB3CQ96E17 227 aa8.56□□□□□ -1.04
LSM6-204ENST00000504181 NARS2Q96I59 477 aaKnown RBP8.56□□□□□ -1.04
LSM6-204ENST00000504181 PLGRKTQ9HBL7 147 aa8.56□□□□□ -1.04
LSM6-204ENST00000504181 ZNF446Q9NWS9 450 aa8.56□□□□□ -1.04
LSM6-204ENST00000504181 IGLV5-52A0A0A0MRZ9 124 aa8.55□□□□□ -1.04
LSM6-204ENST00000504181 SULT1C2O00338 296 aa8.55□□□□□ -1.04
LSM6-204ENST00000504181 HPRT1P00492 218 aa8.55□□□□□ -1.04
LSM6-204ENST00000504181 FGF2P09038 288 aa8.55□□□□□ -1.04
LSM6-204ENST00000504181 EIF2B2P49770 351 aaKnown RBP8.55□□□□□ -1.04
LSM6-204ENST00000504181 ZNF485Q8NCK3 441 aa8.55□□□□□ -1.04
LSM6-204ENST00000504181 OR4B1Q8NGF8 309 aa8.55□□□□□ -1.04
LSM6-204ENST00000504181 OR4C16Q8NGL9 310 aa8.55□□□□□ -1.04
LSM6-204ENST00000504181 GNPNAT1Q96EK6 184 aaPredicted RBP8.55□□□□□ -1.04
LSM6-204ENST00000504181 NSG2Q9Y328 171 aa8.55□□□□□ -1.04
LSM6-204ENST00000504181 AP4S1Q9Y587 144 aa8.55□□□□□ -1.04
LSM6-204ENST00000504181 OR51B2Q9Y5P1 312 aa8.55□□□□□ -1.04
LSM6-204ENST00000504181 A6NJY4 79 aa8.54□□□□□ -1.04
LSM6-204ENST00000504181 EI24O14681 340 aa8.54□□□□□ -1.04
LSM6-204ENST00000504181 RBFOX2O43251 390 aaKnown RBP eCLIP8.54□□□□□ -1.04
LSM6-204ENST00000504181 ATP8B1O43520 1251 aa8.54□□□□□ -1.04
LSM6-204ENST00000504181 DENRO43583 198 aaKnown RBP8.54□□□□□ -1.04
LSM6-204ENST00000504181 TALDO1P37837 337 aa8.54□□□□□ -1.04
LSM6-204ENST00000504181 HOXA1P49639 335 aaPredicted RBP8.54□□□□□ -1.04
LSM6-204ENST00000504181 GYS2P54840 703 aa8.54□□□□□ -1.04
LSM6-204ENST00000504181 CLDN12P56749 244 aa8.54□□□□□ -1.04
LSM6-204ENST00000504181 Q6ZS49 121 aa8.54□□□□□ -1.04
LSM6-204ENST00000504181 PHYHIPQ92561 330 aa8.54□□□□□ -1.04
LSM6-204ENST00000504181 TMEM56Q96MV1 263 aa8.54□□□□□ -1.04
LSM6-204ENST00000504181 TMEM208Q9BTX3 173 aa8.54□□□□□ -1.04
LSM6-204ENST00000504181 CENPOQ9BU64 300 aa8.54□□□□□ -1.04
LSM6-204ENST00000504181 DIMT1Q9UNQ2 313 aaKnown RBP8.54□□□□□ -1.04
LSM6-204ENST00000504181 TRAV26-1A0A087WT03 109 aa8.53□□□□□ -1.04
LSM6-204ENST00000504181 A0A0J9YY99 117 aa8.53□□□□□ -1.04
LSM6-204ENST00000504181 CBY3A6NI87 242 aa8.53□□□□□ -1.04
LSM6-204ENST00000504181 ZNF705GA8MUZ8 300 aaPredicted RBP8.53□□□□□ -1.04
LSM6-204ENST00000504181 M0QYG6 137 aa8.53□□□□□ -1.04
LSM6-204ENST00000504181 MFNGO00587 321 aa8.53□□□□□ -1.04
LSM6-204ENST00000504181 FCGR1AP12314 374 aa8.53□□□□□ -1.04
LSM6-204ENST00000504181 NKX2-1P43699 371 aaPredicted RBP8.53□□□□□ -1.04
LSM6-204ENST00000504181 NPBWR1P48145 328 aa8.53□□□□□ -1.04
LSM6-204ENST00000504181 ST3GAL4Q11206 333 aa8.53□□□□□ -1.04
LSM6-204ENST00000504181 OR5I1Q13606 314 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms