RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 SAMD12Q8N8I0 201 aa7.06□□□□□ -1.28
UBR4-216ENST00000494503 STXBP6Q8NFX7 210 aa7.06□□□□□ -1.28
UBR4-216ENST00000494503 OR6F1Q8NGZ6 308 aa7.06□□□□□ -1.28
UBR4-216ENST00000494503 ST8SIA2Q92186 375 aa7.06□□□□□ -1.28
UBR4-216ENST00000494503 ATP6V0BQ99437 205 aa7.06□□□□□ -1.28
UBR4-216ENST00000494503 NXF2Q9GZY0 626 aaKnown RBP7.06□□□□□ -1.28
UBR4-216ENST00000494503 FXYD6Q9H0Q3 95 aa7.06□□□□□ -1.28
UBR4-216ENST00000494503 MS4A6AQ9H2W1 248 aa7.06□□□□□ -1.28
UBR4-216ENST00000494503 C11orf68Q9H3H3 251 aaKnown RBP7.06□□□□□ -1.28
UBR4-216ENST00000494503 DFFBO76075 338 aa7.05□□□□□ -1.28
UBR4-216ENST00000494503 HRH1P35367 487 aa7.05□□□□□ -1.28
UBR4-216ENST00000494503 SNCAP37840 140 aa7.05□□□□□ -1.28
UBR4-216ENST00000494503 UBE2NLQ5JXB2 153 aa7.05□□□□□ -1.28
UBR4-216ENST00000494503 TOMM20LQ6UXN7 152 aa7.05□□□□□ -1.28
UBR4-216ENST00000494503 TBC1D26Q86UD7 250 aa7.05□□□□□ -1.28
UBR4-216ENST00000494503 SLC35G3Q8N808 338 aa7.05□□□□□ -1.28
UBR4-216ENST00000494503 DUSP18Q8NEJ0 188 aa7.05□□□□□ -1.28
UBR4-216ENST00000494503 MRGPRFQ96AM1 343 aa7.05□□□□□ -1.28
UBR4-216ENST00000494503 NARS2Q96I59 477 aaKnown RBP7.05□□□□□ -1.28
UBR4-216ENST00000494503 PDCD10Q9BUL8 212 aa7.05□□□□□ -1.28
UBR4-216ENST00000494503 TMEM231Q9H6L2 316 aa7.05□□□□□ -1.28
UBR4-216ENST00000494503 TMEM14BQ9NUH8 114 aa7.05□□□□□ -1.28
UBR4-216ENST00000494503 PUS1Q9Y606 427 aaKnown RBP eCLIP7.05□□□□□ -1.28
UBR4-216ENST00000494503 I3L2K1 104 aa7.04□□□□□ -1.28
UBR4-216ENST00000494503 IFNA17P01571 189 aa7.04□□□□□ -1.28
UBR4-216ENST00000494503 APOHP02749 345 aaPredicted RBP7.04□□□□□ -1.28
UBR4-216ENST00000494503 CD5P06127 495 aa7.04□□□□□ -1.28
UBR4-216ENST00000494503 PGAM2P15259 253 aa7.04□□□□□ -1.28
UBR4-216ENST00000494503 PRSS3P35030 304 aa7.04□□□□□ -1.28
UBR4-216ENST00000494503 NPBWR1P48145 328 aa7.04□□□□□ -1.28
UBR4-216ENST00000494503 HOXA1P49639 335 aaPredicted RBP7.04□□□□□ -1.28
UBR4-216ENST00000494503 AKR1C2P52895 323 aa7.04□□□□□ -1.28
UBR4-216ENST00000494503 TAS2R20P59543 309 aa7.04□□□□□ -1.28
UBR4-216ENST00000494503 DHRS11Q6UWP2 260 aa7.04□□□□□ -1.28
UBR4-216ENST00000494503 RNASE11Q8TAA1 199 aaKnown RBP7.04□□□□□ -1.28
UBR4-216ENST00000494503 OR10C1Q96KK4 312 aa7.04□□□□□ -1.28
UBR4-216ENST00000494503 TXN2Q99757 166 aa7.04□□□□□ -1.28
UBR4-216ENST00000494503 ENY2Q9NPA8 101 aa7.04□□□□□ -1.28
UBR4-216ENST00000494503 CLEC5AQ9NY25 188 aa7.04□□□□□ -1.28
UBR4-216ENST00000494503 IGHV4-28A0A0C4DH34 117 aa7.03□□□□□ -1.28
UBR4-216ENST00000494503 KNCNA6PVL3 124 aa7.03□□□□□ -1.28
UBR4-216ENST00000494503 C11orf94C9JXX5 98 aa7.03□□□□□ -1.28
UBR4-216ENST00000494503 SCGB2A1O75556 95 aa7.03□□□□□ -1.28
UBR4-216ENST00000494503 ZNF688P0C7X2 276 aa7.03□□□□□ -1.28
UBR4-216ENST00000494503 HLA-DMBP28068 263 aa7.03□□□□□ -1.28
UBR4-216ENST00000494503 TGFBR1P36897 503 aa7.03□□□□□ -1.28
UBR4-216ENST00000494503 OPRK1P41145 380 aa7.03□□□□□ -1.28
UBR4-216ENST00000494503 TCTAP57738 103 aa7.03□□□□□ -1.28
UBR4-216ENST00000494503 LSM3P62310 102 aaKnown RBP7.03□□□□□ -1.28
UBR4-216ENST00000494503 PRCDQ00LT1 54 aa7.03□□□□□ -1.28
UBR4-216ENST00000494503 IZUMO4Q1ZYL8 232 aa7.03□□□□□ -1.28
UBR4-216ENST00000494503 RNASE12Q5GAN4 147 aaKnown RBP7.03□□□□□ -1.28
UBR4-216ENST00000494503 ACTL10Q5JWF8 245 aa7.03□□□□□ -1.28
UBR4-216ENST00000494503 FAM90A2PQ658T7 463 aa7.03□□□□□ -1.28
UBR4-216ENST00000494503 LPCAT3Q6P1A2 487 aa7.03□□□□□ -1.28
UBR4-216ENST00000494503 ZNF600Q6ZNG1 722 aa7.03□□□□□ -1.28
UBR4-216ENST00000494503 SNX29P2Q8IUI4 249 aa7.03□□□□□ -1.28
UBR4-216ENST00000494503 FAM24BQ8N5W8 94 aa7.03□□□□□ -1.28
UBR4-216ENST00000494503 TMEM230Q96A57 120 aa7.03□□□□□ -1.28
UBR4-216ENST00000494503 METTL26Q96S19 204 aa7.03□□□□□ -1.28
UBR4-216ENST00000494503 IGHV4-4A0A075B6R2 117 aa7.02□□□□□ -1.29
UBR4-216ENST00000494503 SMIM31A0A1B0GVY4 71 aa7.02□□□□□ -1.29
UBR4-216ENST00000494503 A0A1W2PS18 150 aa7.02□□□□□ -1.29
UBR4-216ENST00000494503 NPPCP23582 126 aa7.02□□□□□ -1.29
UBR4-216ENST00000494503 HSPE1P61604 102 aaKnown RBP7.02□□□□□ -1.29
UBR4-216ENST00000494503 Q6ZTC4 211 aa7.02□□□□□ -1.29
UBR4-216ENST00000494503 ZNF767PQ75MW2 155 aa7.02□□□□□ -1.29
UBR4-216ENST00000494503 CROCCP3Q8IVE0 287 aa7.02□□□□□ -1.29
UBR4-216ENST00000494503 LILRB2Q8N423 598 aa7.02□□□□□ -1.29
UBR4-216ENST00000494503 ZNF414Q96IQ9 312 aa7.02□□□□□ -1.29
UBR4-216ENST00000494503 SEC22AQ96IW7 307 aa7.02□□□□□ -1.29
UBR4-216ENST00000494503 APLNQ9ULZ1 77 aa7.02□□□□□ -1.29
UBR4-216ENST00000494503 TRAV10A0A0B4J240 114 aa7.01□□□□□ -1.29
UBR4-216ENST00000494503 MIFP14174 115 aa7.01□□□□□ -1.29
UBR4-216ENST00000494503 PI3P19957 117 aa7.01□□□□□ -1.29
UBR4-216ENST00000494503 P2RY1P47900 373 aa7.01□□□□□ -1.29
UBR4-216ENST00000494503 EIF2B2P49770 351 aaKnown RBP7.01□□□□□ -1.29
UBR4-216ENST00000494503 PPP5CP53041 499 aa7.01□□□□□ -1.29
UBR4-216ENST00000494503 SUB1P53999 127 aaKnown RBP eCLIP7.01□□□□□ -1.29
UBR4-216ENST00000494503 TRIM16LQ309B1 348 aa7.01□□□□□ -1.29
UBR4-216ENST00000494503 Q8NAQ8 132 aa7.01□□□□□ -1.29
UBR4-216ENST00000494503 ZNF114Q8NC26 417 aa7.01□□□□□ -1.29
UBR4-216ENST00000494503 GRAMD2BQ96HH9 432 aa7.01□□□□□ -1.29
UBR4-216ENST00000494503 VSIRQ9H7M9 311 aa7.01□□□□□ -1.29
UBR4-216ENST00000494503 COMMD3Q9UBI1 195 aa7.01□□□□□ -1.29
UBR4-216ENST00000494503 TBC1D24Q9ULP9 559 aa7.01□□□□□ -1.29
UBR4-216ENST00000494503 A0A1B0GU03 582 aa7□□□□□ -1.29
UBR4-216ENST00000494503 M0QYG6 137 aa7□□□□□ -1.29
UBR4-216ENST00000494503 M0R2N4 97 aa7□□□□□ -1.29
UBR4-216ENST00000494503 CORTO00230 105 aa7□□□□□ -1.29
UBR4-216ENST00000494503 IGKV1-39P01597 117 aa7□□□□□ -1.29
UBR4-216ENST00000494503 IGKV1D-39P04432 117 aa7□□□□□ -1.29
UBR4-216ENST00000494503 RBMY1A1P0DJD3 496 aaKnown RBP7□□□□□ -1.29
UBR4-216ENST00000494503 RBMY1CP0DJD4 496 aa7□□□□□ -1.29
UBR4-216ENST00000494503 SPP1P10451 314 aa7□□□□□ -1.29
UBR4-216ENST00000494503 C4BPBP20851 252 aa7□□□□□ -1.29
UBR4-216ENST00000494503 ETV6P41212 452 aa7□□□□□ -1.29
UBR4-216ENST00000494503 DHRS2Q13268 280 aa7□□□□□ -1.29
UBR4-216ENST00000494503 RBMY1FQ15415 496 aaKnown RBP7□□□□□ -1.29
UBR4-216ENST00000494503 TMEM41BQ5BJD5 291 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms