RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 MYH2Q9UKX2 1941 aa2.21□□□□□ -2.06
VPS13A-211ENST00000484581 HECW1Q76N89 1606 aa2.2□□□□□ -2.06
VPS13A-211ENST00000484581 WDR90Q96KV7 1748 aa2.2□□□□□ -2.06
VPS13A-211ENST00000484581 TRBV19A0A075B6N1 114 aa2.2□□□□□ -2.06
VPS13A-211ENST00000484581 TRAV4A0A0B4J268 109 aa2.2□□□□□ -2.06
VPS13A-211ENST00000484581 IGHV1-18A0A0C4DH31 117 aa2.2□□□□□ -2.06
VPS13A-211ENST00000484581 J3QRK9 145 aa2.2□□□□□ -2.06
VPS13A-211ENST00000484581 OR2J2O76002 312 aa2.2□□□□□ -2.06
VPS13A-211ENST00000484581 IGKV4-1P06312 121 aa2.2□□□□□ -2.06
VPS13A-211ENST00000484581 RPS4Y1P22090 263 aaKnown RBP2.2□□□□□ -2.06
VPS13A-211ENST00000484581 NFYAP23511 347 aaPredicted RBP2.2□□□□□ -2.06
VPS13A-211ENST00000484581 CASP1P29466 404 aa2.2□□□□□ -2.06
VPS13A-211ENST00000484581 TAS2R41P59536 307 aa2.2□□□□□ -2.06
VPS13A-211ENST00000484581 GNG3P63215 75 aa2.2□□□□□ -2.06
VPS13A-211ENST00000484581 SS18Q15532 418 aa2.2□□□□□ -2.06
VPS13A-211ENST00000484581 KISS1Q15726 138 aa2.2□□□□□ -2.06
VPS13A-211ENST00000484581 AKR1C8PQ5T2L2 129 aa2.2□□□□□ -2.06
VPS13A-211ENST00000484581 TERB2Q8NHR7 220 aa2.2□□□□□ -2.06
VPS13A-211ENST00000484581 GINS3Q9BRX5 216 aa2.2□□□□□ -2.06
VPS13A-211ENST00000484581 TRABDQ9H4I3 376 aa2.2□□□□□ -2.06
VPS13A-211ENST00000484581 BIN3Q9NQY0 253 aa2.2□□□□□ -2.06
VPS13A-211ENST00000484581 SLC39A9Q9NUM3 307 aa2.2□□□□□ -2.06
VPS13A-211ENST00000484581 PRNDQ9UKY0 176 aa2.2□□□□□ -2.06
VPS13A-211ENST00000484581 MYH3P11055 1940 aa2.19□□□□□ -2.06
VPS13A-211ENST00000484581 C19orf84I3L1E1 186 aa2.19□□□□□ -2.06
VPS13A-211ENST00000484581 IFI30P13284 250 aa2.19□□□□□ -2.06
VPS13A-211ENST00000484581 SPI1P17947 270 aa2.19□□□□□ -2.06
VPS13A-211ENST00000484581 TCTAP57738 103 aa2.19□□□□□ -2.06
VPS13A-211ENST00000484581 DEFA3P59666 94 aa2.19□□□□□ -2.06
VPS13A-211ENST00000484581 KRTAP5-7Q6L8G8 165 aa2.19□□□□□ -2.06
VPS13A-211ENST00000484581 LCA10Q71F78 164 aa2.19□□□□□ -2.06
VPS13A-211ENST00000484581 SMIM20Q8N5G0 67 aa2.19□□□□□ -2.06
VPS13A-211ENST00000484581 PCBD2Q9H0N5 130 aa2.19□□□□□ -2.06
VPS13A-211ENST00000484581 SH3BGRL3Q9H299 93 aa2.19□□□□□ -2.06
VPS13A-211ENST00000484581 UFC1Q9Y3C8 167 aa2.19□□□□□ -2.06
VPS13A-211ENST00000484581 CCDC88AQ3V6T2 1871 aa2.19□□□□□ -2.06
VPS13A-211ENST00000484581 DENND4BO75064 1496 aaPredicted RBP2.19□□□□□ -2.06
VPS13A-211ENST00000484581 FNDC10F2Z333 226 aa2.18□□□□□ -2.06
VPS13A-211ENST00000484581 G3V2T6 193 aa2.18□□□□□ -2.06
VPS13A-211ENST00000484581 TRAPPC2LH3BP13 241 aa2.18□□□□□ -2.06
VPS13A-211ENST00000484581 AIPO00170 330 aa2.18□□□□□ -2.06
VPS13A-211ENST00000484581 CIAO1O76071 339 aa2.18□□□□□ -2.06
VPS13A-211ENST00000484581 NDUFC2O95298 119 aa2.18□□□□□ -2.06
VPS13A-211ENST00000484581 IFNA7P01567 189 aa2.18□□□□□ -2.06
VPS13A-211ENST00000484581 PHBP35232 272 aa2.18□□□□□ -2.06
VPS13A-211ENST00000484581 ATP5G3P48201 142 aa2.18□□□□□ -2.06
VPS13A-211ENST00000484581 HINT1P49773 126 aaPredicted RBP2.18□□□□□ -2.06
VPS13A-211ENST00000484581 FXYD2P54710 66 aa2.18□□□□□ -2.06
VPS13A-211ENST00000484581 CDC42P60953 191 aa2.18□□□□□ -2.06
VPS13A-211ENST00000484581 NCALDP61601 193 aa2.18□□□□□ -2.06
VPS13A-211ENST00000484581 ZNF791Q3KP31 576 aaPredicted RBP2.18□□□□□ -2.06
VPS13A-211ENST00000484581 C3orf33Q6P1S2 294 aa2.18□□□□□ -2.06
VPS13A-211ENST00000484581 BRD3OSQ6XYD6 125 aa2.18□□□□□ -2.06
VPS13A-211ENST00000484581 MIR17HGQ75NE6 70 aa2.18□□□□□ -2.06
VPS13A-211ENST00000484581 OR4X2Q8NGF9 303 aa2.18□□□□□ -2.06
VPS13A-211ENST00000484581 C11orf40Q8WZ69 217 aa2.18□□□□□ -2.06
VPS13A-211ENST00000484581 SCGB3A1Q96QR1 104 aa2.18□□□□□ -2.06
VPS13A-211ENST00000484581 IMUPQ9GZP8 106 aa2.18□□□□□ -2.06
VPS13A-211ENST00000484581 LYRM2Q9NU23 88 aaPredicted RBP2.18□□□□□ -2.06
VPS13A-211ENST00000484581 ERGIC3Q9Y282 383 aa2.18□□□□□ -2.06
VPS13A-211ENST00000484581 TRBV10-2A0A0K0K1G8 114 aa2.17□□□□□ -2.06
VPS13A-211ENST00000484581 RFPL4AA6NLU0 287 aa2.17□□□□□ -2.06
VPS13A-211ENST00000484581 CLDN25C9JDP6 229 aa2.17□□□□□ -2.06
VPS13A-211ENST00000484581 PPP5D1E7EU14 171 aa2.17□□□□□ -2.06
VPS13A-211ENST00000484581 RFPL4AL1F8VTS6 287 aa2.17□□□□□ -2.06
VPS13A-211ENST00000484581 LY6LH3BQJ8 138 aa2.17□□□□□ -2.06
VPS13A-211ENST00000484581 CSRP1P21291 193 aaKnown RBP2.17□□□□□ -2.06
VPS13A-211ENST00000484581 S100A4P26447 101 aaKnown RBP2.17□□□□□ -2.06
VPS13A-211ENST00000484581 PIGPP57054 158 aa2.17□□□□□ -2.06
VPS13A-211ENST00000484581 GNG5P63218 68 aa2.17□□□□□ -2.06
VPS13A-211ENST00000484581 SUPT4H1P63272 117 aaKnown RBP2.17□□□□□ -2.06
VPS13A-211ENST00000484581 ERHP84090 104 aaKnown RBP2.17□□□□□ -2.06
VPS13A-211ENST00000484581 SNCBQ16143 134 aa2.17□□□□□ -2.06
VPS13A-211ENST00000484581 LYRM7Q5U5X0 104 aa2.17□□□□□ -2.06
VPS13A-211ENST00000484581 Q6ZTI0 123 aa2.17□□□□□ -2.06
VPS13A-211ENST00000484581 TRAPPC6BQ86SZ2 158 aa2.17□□□□□ -2.06
VPS13A-211ENST00000484581 BPIFA4PQ86YQ2 179 aa2.17□□□□□ -2.06
VPS13A-211ENST00000484581 PFN4Q8NHR9 129 aa2.17□□□□□ -2.06
VPS13A-211ENST00000484581 TMEM106AQ96A25 262 aa2.17□□□□□ -2.06
VPS13A-211ENST00000484581 ZHX1-C8orf76Q96EF9 292 aa2.17□□□□□ -2.06
VPS13A-211ENST00000484581 DOHHQ9BU89 302 aa2.17□□□□□ -2.06
VPS13A-211ENST00000484581 SMPXQ9UHP9 88 aa2.17□□□□□ -2.06
VPS13A-211ENST00000484581 CPAMD8Q8IZJ3 1885 aa2.17□□□□□ -2.06
VPS13A-211ENST00000484581 FMN1Q68DA7 1419 aa2.17□□□□□ -2.06
VPS13A-211ENST00000484581 TMSB15BA0A087X1C1 80 aa2.16□□□□□ -2.06
VPS13A-211ENST00000484581 OR51F1A6NGY5 319 aa2.16□□□□□ -2.06
VPS13A-211ENST00000484581 C3orf84H3BNL1 204 aa2.16□□□□□ -2.06
VPS13A-211ENST00000484581 H7C1C5 153 aa2.16□□□□□ -2.06
VPS13A-211ENST00000484581 PPBPP02775 128 aa2.16□□□□□ -2.06
VPS13A-211ENST00000484581 RPSAP08865 295 aaKnown RBP2.16□□□□□ -2.06
VPS13A-211ENST00000484581 DEFA4P12838 97 aa2.16□□□□□ -2.06
VPS13A-211ENST00000484581 YPEL3P61236 119 aaPredicted RBP2.16□□□□□ -2.06
VPS13A-211ENST00000484581 LCN6P62502 163 aa2.16□□□□□ -2.06
VPS13A-211ENST00000484581 TSNQ15631 228 aaKnown RBP2.16□□□□□ -2.06
VPS13A-211ENST00000484581 ZNF181Q2M3W8 571 aa2.16□□□□□ -2.06
VPS13A-211ENST00000484581 LINC01554Q52M75 96 aa2.16□□□□□ -2.06
VPS13A-211ENST00000484581 FAM27BQ5VT28 67 aa2.16□□□□□ -2.06
VPS13A-211ENST00000484581 GRINAQ7Z429 371 aa2.16□□□□□ -2.06
VPS13A-211ENST00000484581 STX19Q8N4C7 294 aa2.16□□□□□ -2.06
VPS13A-211ENST00000484581 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms