RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 SFTA3P0C7M3 94 aa6.53□□□□□ -1.36
USP54-212ENST00000480210 OR8U8P0C7N1 319 aa6.53□□□□□ -1.36
USP54-212ENST00000480210 SAA1P0DJI8 122 aaPredicted RBP6.53□□□□□ -1.36
USP54-212ENST00000480210 VSIG10L2P0DP72 767 aa6.53□□□□□ -1.36
USP54-212ENST00000480210 AKR1C4P17516 323 aa6.53□□□□□ -1.36
USP54-212ENST00000480210 PI3P19957 117 aa6.53□□□□□ -1.36
USP54-212ENST00000480210 VDAC1P21796 283 aa6.53□□□□□ -1.36
USP54-212ENST00000480210 CNTFRP26992 372 aa6.53□□□□□ -1.36
USP54-212ENST00000480210 NPBWR1P48145 328 aa6.53□□□□□ -1.36
USP54-212ENST00000480210 PCP4P48539 62 aa6.53□□□□□ -1.36
USP54-212ENST00000480210 PROK1P58294 105 aa6.53□□□□□ -1.36
USP54-212ENST00000480210 RPL8P62917 257 aaKnown RBP6.53□□□□□ -1.36
USP54-212ENST00000480210 CX3CL1P78423 397 aa6.53□□□□□ -1.36
USP54-212ENST00000480210 KIAA0141Q14154 515 aaPredicted RBP6.53□□□□□ -1.36
USP54-212ENST00000480210 PRSS8Q16651 343 aa6.53□□□□□ -1.36
USP54-212ENST00000480210 AKIRIN2Q53H80 203 aa6.53□□□□□ -1.36
USP54-212ENST00000480210 H2BFWTQ7Z2G1 175 aa6.53□□□□□ -1.36
USP54-212ENST00000480210 CENPVQ7Z7K6 275 aaPredicted RBP6.53□□□□□ -1.36
USP54-212ENST00000480210 ZNF695Q8IW36 515 aa6.53□□□□□ -1.36
USP54-212ENST00000480210 MRPL41Q8IXM3 137 aaKnown RBP6.53□□□□□ -1.36
USP54-212ENST00000480210 LGI3Q8N145 548 aa6.53□□□□□ -1.36
USP54-212ENST00000480210 SGMS2Q8NHU3 365 aa6.53□□□□□ -1.36
USP54-212ENST00000480210 SPATA3Q8NHX4 192 aa6.53□□□□□ -1.36
USP54-212ENST00000480210 WFDC12Q8WWY7 111 aa6.53□□□□□ -1.36
USP54-212ENST00000480210 LSM10Q969L4 123 aaKnown RBP6.53□□□□□ -1.36
USP54-212ENST00000480210 TMEM56Q96MV1 263 aa6.53□□□□□ -1.36
USP54-212ENST00000480210 SRSF8Q9BRL6 282 aaKnown RBP6.53□□□□□ -1.36
USP54-212ENST00000480210 WNT10AQ9GZT5 417 aa6.53□□□□□ -1.36
USP54-212ENST00000480210 RPS10P5Q9NQ39 176 aa6.53□□□□□ -1.36
USP54-212ENST00000480210 SERTAD4Q9NUC0 356 aa6.53□□□□□ -1.36
USP54-212ENST00000480210 PRNDQ9UKY0 176 aa6.53□□□□□ -1.36
USP54-212ENST00000480210 TMEM56-RWDD3S4R434 201 aa6.53□□□□□ -1.36
USP54-212ENST00000480210 SMCO3A2RU48 225 aa6.52□□□□□ -1.37
USP54-212ENST00000480210 S1PR2O95136 353 aa6.52□□□□□ -1.37
USP54-212ENST00000480210 BRI3O95415 125 aa6.52□□□□□ -1.37
USP54-212ENST00000480210 SFT2D2O95562 160 aa6.52□□□□□ -1.37
USP54-212ENST00000480210 CA2P00918 260 aa6.52□□□□□ -1.37
USP54-212ENST00000480210 KRASP01116 189 aa6.52□□□□□ -1.37
USP54-212ENST00000480210 ELANEP08246 267 aa6.52□□□□□ -1.37
USP54-212ENST00000480210 LYL1P12980 280 aa6.52□□□□□ -1.37
USP54-212ENST00000480210 ADCYAP1P18509 176 aa6.52□□□□□ -1.37
USP54-212ENST00000480210 MDKP21741 143 aaPredicted RBP6.52□□□□□ -1.37
USP54-212ENST00000480210 SULT1A2P50226 295 aa6.52□□□□□ -1.37
USP54-212ENST00000480210 TMEM187Q14656 261 aa6.52□□□□□ -1.37
USP54-212ENST00000480210 FXYD3Q14802 87 aa6.52□□□□□ -1.37
USP54-212ENST00000480210 USF2Q15853 346 aaPredicted RBP6.52□□□□□ -1.37
USP54-212ENST00000480210 AKR1C8PQ5T2L2 129 aa6.52□□□□□ -1.37
USP54-212ENST00000480210 OR4A47Q6IF82 309 aa6.52□□□□□ -1.37
USP54-212ENST00000480210 TEX38Q6PEX7 206 aa6.52□□□□□ -1.37
USP54-212ENST00000480210 TMED4Q7Z7H5 227 aa6.52□□□□□ -1.37
USP54-212ENST00000480210 LRTM2Q8N967 370 aa6.52□□□□□ -1.37
USP54-212ENST00000480210 OR4X2Q8NGF9 303 aa6.52□□□□□ -1.37
USP54-212ENST00000480210 OR5B3Q8NH48 314 aa6.52□□□□□ -1.37
USP54-212ENST00000480210 OR4A16Q8NH70 328 aa6.52□□□□□ -1.37
USP54-212ENST00000480210 LYPD6BQ8NI32 183 aa6.52□□□□□ -1.37
USP54-212ENST00000480210 MITD1Q8WV92 249 aa6.52□□□□□ -1.37
USP54-212ENST00000480210 TMEM230Q96A57 120 aa6.52□□□□□ -1.37
USP54-212ENST00000480210 SEC22AQ96IW7 307 aa6.52□□□□□ -1.37
USP54-212ENST00000480210 AQP10Q96PS8 301 aa6.52□□□□□ -1.37
USP54-212ENST00000480210 TP53RKQ96S44 253 aa6.52□□□□□ -1.37
USP54-212ENST00000480210 GPHA2Q96T91 129 aa6.52□□□□□ -1.37
USP54-212ENST00000480210 SPIN2AQ99865 258 aa6.52□□□□□ -1.37
USP54-212ENST00000480210 SPIN2BQ9BPZ2 258 aa6.52□□□□□ -1.37
USP54-212ENST00000480210 ZNF747Q9BV97 191 aa6.52□□□□□ -1.37
USP54-212ENST00000480210 ACTR3CQ9C0K3 210 aaPredicted RBP6.52□□□□□ -1.37
USP54-212ENST00000480210 TMEM140Q9NV12 185 aa6.52□□□□□ -1.37
USP54-212ENST00000480210 FLVCR2Q9UPI3 526 aa6.52□□□□□ -1.37
USP54-212ENST00000480210 ZNF257Q9Y2Q1 563 aa6.52□□□□□ -1.37
USP54-212ENST00000480210 FBXO7Q9Y3I1 522 aa6.52□□□□□ -1.37
USP54-212ENST00000480210 NF1P21359 2839 aa6.51□□□□□ -1.37
USP54-212ENST00000480210 TRAV14DV4A0A0A6YYC5 116 aa6.51□□□□□ -1.37
USP54-212ENST00000480210 A0A1B0GV90 55 aa6.51□□□□□ -1.37
USP54-212ENST00000480210 C7orf77A4D0Y5 90 aa6.51□□□□□ -1.37
USP54-212ENST00000480210 PSMB11A5LHX3 300 aa6.51□□□□□ -1.37
USP54-212ENST00000480210 H3BUA1 57 aa6.51□□□□□ -1.37
USP54-212ENST00000480210 M0R143 59 aa6.51□□□□□ -1.37
USP54-212ENST00000480210 FCN1O00602 326 aa6.51□□□□□ -1.37
USP54-212ENST00000480210 HMGB3O15347 200 aaKnown RBP6.51□□□□□ -1.37
USP54-212ENST00000480210 CYB5BO43169 146 aa6.51□□□□□ -1.37
USP54-212ENST00000480210 DFFBO76075 338 aa6.51□□□□□ -1.37
USP54-212ENST00000480210 DUS4LO95620 317 aaKnown RBP6.51□□□□□ -1.37
USP54-212ENST00000480210 OPN1MWP04001 364 aa6.51□□□□□ -1.37
USP54-212ENST00000480210 OPN1MW2P0DN77 364 aa6.51□□□□□ -1.37
USP54-212ENST00000480210 OPN1MW3P0DN78 364 aa6.51□□□□□ -1.37
USP54-212ENST00000480210 SLC25A6P12236 298 aa6.51□□□□□ -1.37
USP54-212ENST00000480210 RPL27AP46776 148 aaKnown RBP6.51□□□□□ -1.37
USP54-212ENST00000480210 AKR1C2P52895 323 aa6.51□□□□□ -1.37
USP54-212ENST00000480210 RANP62826 216 aaKnown RBP6.51□□□□□ -1.37
USP54-212ENST00000480210 SRSF2Q01130 221 aaKnown RBP6.51□□□□□ -1.37
USP54-212ENST00000480210 TNXAQ16473 311 aa6.51□□□□□ -1.37
USP54-212ENST00000480210 FBLN7Q53RD9 439 aa6.51□□□□□ -1.37
USP54-212ENST00000480210 SHISA2Q6UWI4 295 aa6.51□□□□□ -1.37
USP54-212ENST00000480210 LYG2Q86SG7 212 aa6.51□□□□□ -1.37
USP54-212ENST00000480210 ZNF429Q86V71 674 aa6.51□□□□□ -1.37
USP54-212ENST00000480210 SELENOHQ8IZQ5 122 aaKnown RBP6.51□□□□□ -1.37
USP54-212ENST00000480210 ZFP82Q8N141 532 aa6.51□□□□□ -1.37
USP54-212ENST00000480210 C3orf56Q8N813 242 aa6.51□□□□□ -1.37
USP54-212ENST00000480210 UBAC2Q8NBM4 344 aa6.51□□□□□ -1.37
USP54-212ENST00000480210 ADAD2Q8NCV1 583 aaKnown RBP6.51□□□□□ -1.37
USP54-212ENST00000480210 OR1L8Q8NGR8 309 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms