RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 COMMD3Q9UBI1 195 aa8.36□□□□□ -1.07
HDLBP-236ENST00000477477 IGHV3OR16-13A0A075B7E8 117 aa8.35□□□□□ -1.07
HDLBP-236ENST00000477477 IGHV3-74A0A0B4J1X5 117 aa8.35□□□□□ -1.07
HDLBP-236ENST00000477477 MPTX1A8MV57 137 aa8.35□□□□□ -1.07
HDLBP-236ENST00000477477 APOA1P02647 267 aa8.35□□□□□ -1.07
HDLBP-236ENST00000477477 HSPE1P61604 102 aaKnown RBP8.35□□□□□ -1.07
HDLBP-236ENST00000477477 ERHP84090 104 aaKnown RBP8.35□□□□□ -1.07
HDLBP-236ENST00000477477 GBGT1Q8N5D6 347 aa8.35□□□□□ -1.07
HDLBP-236ENST00000477477 GINS3Q9BRX5 216 aa8.35□□□□□ -1.07
HDLBP-236ENST00000477477 VCX3AQ9NNX9 186 aa8.35□□□□□ -1.07
HDLBP-236ENST00000477477 KMT2AQ03164 3969 aa8.35□□□□□ -1.07
HDLBP-236ENST00000477477 A0A087WXM4 84 aa8.34□□□□□ -1.07
HDLBP-236ENST00000477477 SMIM31A0A1B0GVY4 71 aa8.34□□□□□ -1.07
HDLBP-236ENST00000477477 M0QYG6 137 aa8.34□□□□□ -1.07
HDLBP-236ENST00000477477 NPBWR1P48145 328 aa8.34□□□□□ -1.07
HDLBP-236ENST00000477477 RND3P61587 244 aa8.34□□□□□ -1.07
HDLBP-236ENST00000477477 PAFAH1B2P68402 229 aa8.34□□□□□ -1.07
HDLBP-236ENST00000477477 IZUMO4Q1ZYL8 232 aa8.34□□□□□ -1.07
HDLBP-236ENST00000477477 SPINK9Q5DT21 86 aa8.34□□□□□ -1.07
HDLBP-236ENST00000477477 TOMM20LQ6UXN7 152 aa8.34□□□□□ -1.07
HDLBP-236ENST00000477477 TCF24Q7RTU0 167 aa8.34□□□□□ -1.07
HDLBP-236ENST00000477477 ST8SIA2Q92186 375 aa8.34□□□□□ -1.07
HDLBP-236ENST00000477477 RARRES2Q99969 163 aa8.34□□□□□ -1.07
HDLBP-236ENST00000477477 C11orf68Q9H3H3 251 aaKnown RBP8.34□□□□□ -1.07
HDLBP-236ENST00000477477 VSIRQ9H7M9 311 aa8.34□□□□□ -1.07
HDLBP-236ENST00000477477 FRAS1Q86XX4 4008 aa8.33□□□□□ -1.08
HDLBP-236ENST00000477477 INS-IGF2F8WCM5 200 aa8.33□□□□□ -1.08
HDLBP-236ENST00000477477 HPGDSO60760 199 aa8.33□□□□□ -1.08
HDLBP-236ENST00000477477 IGKV1-5P01602 117 aa8.33□□□□□ -1.08
HDLBP-236ENST00000477477 APOHP02749 345 aaPredicted RBP8.33□□□□□ -1.08
HDLBP-236ENST00000477477 CD5P06127 495 aa8.33□□□□□ -1.08
HDLBP-236ENST00000477477 P0C879 139 aa8.33□□□□□ -1.08
HDLBP-236ENST00000477477 ELK1P19419 428 aa8.33□□□□□ -1.08
HDLBP-236ENST00000477477 NCS1P62166 190 aa8.33□□□□□ -1.08
HDLBP-236ENST00000477477 ZNF600Q6ZNG1 722 aa8.33□□□□□ -1.08
HDLBP-236ENST00000477477 LILRB2Q8N423 598 aa8.33□□□□□ -1.08
HDLBP-236ENST00000477477 RPP25LQ8N5L8 163 aaKnown RBP8.33□□□□□ -1.08
HDLBP-236ENST00000477477 DUSP18Q8NEJ0 188 aa8.33□□□□□ -1.08
HDLBP-236ENST00000477477 ZNF486Q96H40 463 aaPredicted RBP8.33□□□□□ -1.08
HDLBP-236ENST00000477477 MFFQ9GZY8 342 aa8.33□□□□□ -1.08
HDLBP-236ENST00000477477 ZFAND3Q9H8U3 227 aa8.33□□□□□ -1.08
HDLBP-236ENST00000477477 PUS1Q9Y606 427 aaKnown RBP eCLIP8.33□□□□□ -1.08
HDLBP-236ENST00000477477 TRAV2A0A0B4J234 112 aa8.32□□□□□ -1.08
HDLBP-236ENST00000477477 A0A0B4J293 547 aa8.32□□□□□ -1.08
HDLBP-236ENST00000477477 ST8SIA3O43173 380 aa8.32□□□□□ -1.08
HDLBP-236ENST00000477477 DEDDO75618 318 aa8.32□□□□□ -1.08
HDLBP-236ENST00000477477 DFFBO76075 338 aa8.32□□□□□ -1.08
HDLBP-236ENST00000477477 TNFAIP8O95379 198 aa8.32□□□□□ -1.08
HDLBP-236ENST00000477477 CA1P00915 261 aaPredicted RBP8.32□□□□□ -1.08
HDLBP-236ENST00000477477 PGAM2P15259 253 aa8.32□□□□□ -1.08
HDLBP-236ENST00000477477 PI3P19957 117 aa8.32□□□□□ -1.08
HDLBP-236ENST00000477477 SNCAP37840 140 aa8.32□□□□□ -1.08
HDLBP-236ENST00000477477 AKR1C2P52895 323 aa8.32□□□□□ -1.08
HDLBP-236ENST00000477477 PIGPP57054 158 aa8.32□□□□□ -1.08
HDLBP-236ENST00000477477 DEFB131AP59861 70 aa8.32□□□□□ -1.08
HDLBP-236ENST00000477477 VBP1P61758 197 aa8.32□□□□□ -1.08
HDLBP-236ENST00000477477 LGALS9CQ6DKI2 356 aa8.32□□□□□ -1.08
HDLBP-236ENST00000477477 PVRIGQ6DKI7 326 aa8.32□□□□□ -1.08
HDLBP-236ENST00000477477 LHFPL1Q86WI0 220 aa8.32□□□□□ -1.08
HDLBP-236ENST00000477477 SLC35G3Q8N808 338 aa8.32□□□□□ -1.08
HDLBP-236ENST00000477477 OR11H2Q8NH07 326 aa8.32□□□□□ -1.08
HDLBP-236ENST00000477477 C11orf45Q8TAV5 145 aa8.32□□□□□ -1.08
HDLBP-236ENST00000477477 TP53RKQ96S44 253 aa8.32□□□□□ -1.08
HDLBP-236ENST00000477477 FUNDC2Q9BWH2 189 aa8.32□□□□□ -1.08
HDLBP-236ENST00000477477 MS4A6AQ9H2W1 248 aa8.32□□□□□ -1.08
HDLBP-236ENST00000477477 IGHV3-66A0A0C4DH42 116 aa8.31□□□□□ -1.08
HDLBP-236ENST00000477477 A0A1B0GU03 582 aa8.31□□□□□ -1.08
HDLBP-236ENST00000477477 DNASE2O00115 360 aaPredicted RBP8.31□□□□□ -1.08
HDLBP-236ENST00000477477 CORTO00230 105 aa8.31□□□□□ -1.08
HDLBP-236ENST00000477477 ATG12O94817 140 aa8.31□□□□□ -1.08
HDLBP-236ENST00000477477 TMEM50AO95807 157 aa8.31□□□□□ -1.08
HDLBP-236ENST00000477477 IFNA17P01571 189 aa8.31□□□□□ -1.08
HDLBP-236ENST00000477477 RNASE2P10153 161 aaKnown RBP8.31□□□□□ -1.08
HDLBP-236ENST00000477477 NANOS2P60321 138 aaKnown RBP8.31□□□□□ -1.08
HDLBP-236ENST00000477477 TMEM187Q14656 261 aa8.31□□□□□ -1.08
HDLBP-236ENST00000477477 RBMS2Q15434 407 aaKnown RBP8.31□□□□□ -1.08
HDLBP-236ENST00000477477 RNASE12Q5GAN4 147 aaKnown RBP8.31□□□□□ -1.08
HDLBP-236ENST00000477477 RNASE10Q5GAN6 216 aaKnown RBP8.31□□□□□ -1.08
HDLBP-236ENST00000477477 LEMD1Q68G75 181 aa8.31□□□□□ -1.08
HDLBP-236ENST00000477477 ARRDC1Q8N5I2 433 aa8.31□□□□□ -1.08
HDLBP-236ENST00000477477 FAM24BQ8N5W8 94 aa8.31□□□□□ -1.08
HDLBP-236ENST00000477477 PDCD10Q9BUL8 212 aa8.31□□□□□ -1.08
HDLBP-236ENST00000477477 TMEM231Q9H6L2 316 aa8.31□□□□□ -1.08
HDLBP-236ENST00000477477 KLK11Q9UBX7 282 aa8.31□□□□□ -1.08
HDLBP-236ENST00000477477 FBXL17Q9UF56 701 aa8.31□□□□□ -1.08
HDLBP-236ENST00000477477 C3orf85A0A1B0GTC6 90 aa8.3□□□□□ -1.08
HDLBP-236ENST00000477477 CD3DP04234 171 aa8.3□□□□□ -1.08
HDLBP-236ENST00000477477 IFNA4P05014 189 aa8.3□□□□□ -1.08
HDLBP-236ENST00000477477 HOXA1P49639 335 aaPredicted RBP8.3□□□□□ -1.08
HDLBP-236ENST00000477477 RORCP51449 518 aa8.3□□□□□ -1.08
HDLBP-236ENST00000477477 PPP5CP53041 499 aa8.3□□□□□ -1.08
HDLBP-236ENST00000477477 SUB1P53999 127 aaKnown RBP eCLIP8.3□□□□□ -1.08
HDLBP-236ENST00000477477 RPL11P62913 178 aaKnown RBP8.3□□□□□ -1.08
HDLBP-236ENST00000477477 OR52I2Q8NH67 350 aa8.3□□□□□ -1.08
HDLBP-236ENST00000477477 FAM210AQ96ND0 272 aa8.3□□□□□ -1.08
HDLBP-236ENST00000477477 FNDC4Q9H6D8 234 aaPredicted RBP8.3□□□□□ -1.08
HDLBP-236ENST00000477477 MRPL36Q9P0J6 103 aaKnown RBP8.3□□□□□ -1.08
HDLBP-236ENST00000477477 HERC2O95714 4834 aa8.29□□□□□ -1.08
HDLBP-236ENST00000477477 DNAH10Q8IVF4 4471 aa8.29□□□□□ -1.08
HDLBP-236ENST00000477477 A0A0G2JRQ6 117 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms