RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 hADV38S2A0JD32 116 aa2.02□□□□□ -2.09
VPS50-212ENST00000476413 SMIM10L2AP0DMW4 78 aa2.02□□□□□ -2.09
VPS50-212ENST00000476413 SMIM10L2BP0DMW5 78 aa2.02□□□□□ -2.09
VPS50-212ENST00000476413 ZNF345Q14585 488 aa2.02□□□□□ -2.09
VPS50-212ENST00000476413 CDK10Q15131 360 aa2.02□□□□□ -2.09
VPS50-212ENST00000476413 TMEM97Q5BJF2 176 aa2.02□□□□□ -2.09
VPS50-212ENST00000476413 SPANXN3Q5MJ09 141 aa2.02□□□□□ -2.09
VPS50-212ENST00000476413 FP248Q71RG6 208 aaPredicted RBP2.02□□□□□ -2.09
VPS50-212ENST00000476413 BORCS7Q96B45 105 aa2.02□□□□□ -2.09
VPS50-212ENST00000476413 TLNRD1Q9H1K6 362 aa2.02□□□□□ -2.09
VPS50-212ENST00000476413 CST9LQ9H4G1 147 aa2.02□□□□□ -2.09
VPS50-212ENST00000476413 C14orf105Q9NVL8 296 aa2.02□□□□□ -2.09
VPS50-212ENST00000476413 TOPBP1Q92547 1522 aa2.01□□□□□ -2.09
VPS50-212ENST00000476413 MUC6Q6W4X9 2439 aa2.01□□□□□ -2.09
VPS50-212ENST00000476413 NCOA1Q15788 1441 aa2.01□□□□□ -2.09
VPS50-212ENST00000476413 TMEM210A6NLX4 147 aa2.01□□□□□ -2.09
VPS50-212ENST00000476413 CRYZL1O95825 349 aa2.01□□□□□ -2.09
VPS50-212ENST00000476413 SHBGP04278 402 aa2.01□□□□□ -2.09
VPS50-212ENST00000476413 AKR1C3P42330 323 aa2.01□□□□□ -2.09
VPS50-212ENST00000476413 C10orf126Q8N4M7 172 aa2.01□□□□□ -2.09
VPS50-212ENST00000476413 MCFD2Q8NI22 146 aa2.01□□□□□ -2.09
VPS50-212ENST00000476413 MBD3L1Q8WWY6 194 aa2.01□□□□□ -2.09
VPS50-212ENST00000476413 TMEM106AQ96A25 262 aa2.01□□□□□ -2.09
VPS50-212ENST00000476413 MRPL32Q9BYC8 188 aaKnown RBP2.01□□□□□ -2.09
VPS50-212ENST00000476413 FBXO5Q9UKT4 447 aa2.01□□□□□ -2.09
VPS50-212ENST00000476413 TRAV9-1A0A075B6T8 112 aa2□□□□□ -2.09
VPS50-212ENST00000476413 MEIKINA0A087WXM9 373 aa2□□□□□ -2.09
VPS50-212ENST00000476413 TRAPPC13A5PLN9 417 aa2□□□□□ -2.09
VPS50-212ENST00000476413 OR2J2O76002 312 aa2□□□□□ -2.09
VPS50-212ENST00000476413 IFNA6P05013 189 aa2□□□□□ -2.09
VPS50-212ENST00000476413 HOXA6P31267 233 aa2□□□□□ -2.09
VPS50-212ENST00000476413 ANP32AP39687 249 aaKnown RBP2□□□□□ -2.09
VPS50-212ENST00000476413 HIST1H3AP68431 136 aa2□□□□□ -2.09
VPS50-212ENST00000476413 H3F3AP84243 136 aa2□□□□□ -2.09
VPS50-212ENST00000476413 STX5Q13190 355 aa2□□□□□ -2.09
VPS50-212ENST00000476413 NDUFA5Q16718 116 aa2□□□□□ -2.09
VPS50-212ENST00000476413 LCN15Q6UWW0 184 aa2□□□□□ -2.09
VPS50-212ENST00000476413 BPIFA4PQ86YQ2 179 aa2□□□□□ -2.09
VPS50-212ENST00000476413 OR52R1Q8NGF1 315 aa2□□□□□ -2.09
VPS50-212ENST00000476413 BAZ2BQ9UIF8 2168 aaKnown RBP2□□□□□ -2.09
VPS50-212ENST00000476413 FREM1Q5H8C1 2179 aa1.99□□□□□ -2.09
VPS50-212ENST00000476413 TRBV6-5A0A0K0K1A5 114 aa1.99□□□□□ -2.09
VPS50-212ENST00000476413 ZNF682O95780 498 aa1.99□□□□□ -2.09
VPS50-212ENST00000476413 PMP2P02689 132 aa1.99□□□□□ -2.09
VPS50-212ENST00000476413 METTL15P1P0C7V9 234 aa1.99□□□□□ -2.09
VPS50-212ENST00000476413 MAGEA12P43365 314 aa1.99□□□□□ -2.09
VPS50-212ENST00000476413 CDC42P60953 191 aa1.99□□□□□ -2.09
VPS50-212ENST00000476413 C12orf74Q32Q52 190 aa1.99□□□□□ -2.09
VPS50-212ENST00000476413 KRTAP21-3Q3LHN1 58 aa1.99□□□□□ -2.09
VPS50-212ENST00000476413 CT55Q8WUE5 264 aa1.99□□□□□ -2.09
VPS50-212ENST00000476413 SCGB3A1Q96QR1 104 aa1.99□□□□□ -2.09
VPS50-212ENST00000476413 CMSS1Q9BQ75 279 aaKnown RBP1.99□□□□□ -2.09
VPS50-212ENST00000476413 TRIM4Q9C037 500 aa1.99□□□□□ -2.09
VPS50-212ENST00000476413 PLXND1Q9Y4D7 1925 aa1.99□□□□□ -2.09
VPS50-212ENST00000476413 SDCBPO00560 298 aaPredicted RBP1.98□□□□□ -2.09
VPS50-212ENST00000476413 PIRO00625 290 aa1.98□□□□□ -2.09
VPS50-212ENST00000476413 IFNA10P01566 189 aa1.98□□□□□ -2.09
VPS50-212ENST00000476413 CRPP02741 224 aa1.98□□□□□ -2.09
VPS50-212ENST00000476413 ELOBQ15370 118 aa1.98□□□□□ -2.09
VPS50-212ENST00000476413 NNATQ16517 81 aa1.98□□□□□ -2.09
VPS50-212ENST00000476413 CLVS1Q8IUQ0 354 aaPredicted RBP1.98□□□□□ -2.09
VPS50-212ENST00000476413 GDPD1Q8N9F7 314 aa1.98□□□□□ -2.09
VPS50-212ENST00000476413 OR52L1Q8NGH7 329 aa1.98□□□□□ -2.09
VPS50-212ENST00000476413 UQCC1Q9NVA1 299 aa1.98□□□□□ -2.09
VPS50-212ENST00000476413 TTC21AQ8NDW8 1320 aa1.97□□□□□ -2.09
VPS50-212ENST00000476413 Q6ZQT0 140 aa1.97□□□□□ -2.09
VPS50-212ENST00000476413 MIR17HGQ75NE6 70 aa1.97□□□□□ -2.09
VPS50-212ENST00000476413 OR6V1Q8N148 313 aa1.97□□□□□ -2.09
VPS50-212ENST00000476413 NAA38Q9BRA0 125 aaKnown RBP1.97□□□□□ -2.09
VPS50-212ENST00000476413 CYSLTR1Q9Y271 337 aa1.97□□□□□ -2.09
VPS50-212ENST00000476413 SETD5Q9C0A6 1442 aa1.97□□□□□ -2.09
VPS50-212ENST00000476413 PCF11O94913 1555 aaKnown RBP1.97□□□□□ -2.09
VPS50-212ENST00000476413 BRWD1Q9NSI6 2320 aa1.96□□□□□ -2.1
VPS50-212ENST00000476413 HEATR5BQ9P2D3 2071 aa1.96□□□□□ -2.1
VPS50-212ENST00000476413 F8W036 122 aa1.96□□□□□ -2.1
VPS50-212ENST00000476413 PDE6DO43924 150 aa1.96□□□□□ -2.1
VPS50-212ENST00000476413 CTSDP07339 412 aaPredicted RBP1.96□□□□□ -2.1
VPS50-212ENST00000476413 RPSAP08865 295 aaKnown RBP1.96□□□□□ -2.1
VPS50-212ENST00000476413 HTR1AP08908 422 aa1.96□□□□□ -2.1
VPS50-212ENST00000476413 RBP1P09455 135 aa1.96□□□□□ -2.1
VPS50-212ENST00000476413 CRYGAP11844 174 aa1.96□□□□□ -2.1
VPS50-212ENST00000476413 REEP5Q00765 189 aa1.96□□□□□ -2.1
VPS50-212ENST00000476413 ZNF846Q147U1 533 aa1.96□□□□□ -2.1
VPS50-212ENST00000476413 OR51A2Q8NGJ7 313 aa1.96□□□□□ -2.1
VPS50-212ENST00000476413 DOCK3Q8IZD9 2030 aa1.96□□□□□ -2.1
VPS50-212ENST00000476413 ECM29Q5VYK3 1845 aa1.96□□□□□ -2.1
VPS50-212ENST00000476413 MICAL3Q7RTP6 2002 aa1.95□□□□□ -2.1
VPS50-212ENST00000476413 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
VPS50-212ENST00000476413 DNAJC9Q8WXX5 260 aa1.95□□□□□ -2.1
VPS50-212ENST00000476413 DGCR14Q96DF8 476 aaKnown RBP1.95□□□□□ -2.1
VPS50-212ENST00000476413 SIGMAR1Q99720 223 aa1.95□□□□□ -2.1
VPS50-212ENST00000476413 YIPF3Q9GZM5 350 aa1.95□□□□□ -2.1
VPS50-212ENST00000476413 CKLFQ9UBR5 152 aa1.95□□□□□ -2.1
VPS50-212ENST00000476413 ERGIC3Q9Y282 383 aa1.95□□□□□ -2.1
VPS50-212ENST00000476413 SCN10AQ9Y5Y9 1956 aa1.95□□□□□ -2.1
VPS50-212ENST00000476413 COL4A5P29400 1685 aa1.95□□□□□ -2.1
VPS50-212ENST00000476413 MYOFQ9NZM1 2061 aa1.95□□□□□ -2.1
VPS50-212ENST00000476413 SDK1Q7Z5N4 2213 aa1.94□□□□□ -2.1
VPS50-212ENST00000476413 IGKV1D-42A0A075B6H8 117 aa1.94□□□□□ -2.1
VPS50-212ENST00000476413 hCG_1818297A0A087WSY0 165 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms