RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 IGKV1D-33P01593 117 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 IGKV1-33P01594 117 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 IGKV1D-16P01601 117 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 IGHV3-7P01780 117 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 IGFBP2P18065 325 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 CD52P31358 61 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 PTGER1P34995 402 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 RPS27P42677 84 aaKnown RBP4.01□□□□□ -1.77
SF3B1-207ENST00000468925 RPL31P62899 125 aaKnown RBP4.01□□□□□ -1.77
SF3B1-207ENST00000468925 MRPL23Q16540 153 aaKnown RBP4.01□□□□□ -1.77
SF3B1-207ENST00000468925 CEACAM16Q2WEN9 425 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 LGALS9BQ3B8N2 356 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 ZNF718Q3SXZ3 478 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 DEFB134Q4QY38 66 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 PDLIM3Q53GG5 364 aaPredicted RBP4.01□□□□□ -1.77
SF3B1-207ENST00000468925 DMRTC1Q5HYR2 192 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 TSPO2Q5TGU0 170 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 OTPQ5XKR4 325 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 LGALS9CQ6DKI2 356 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 RNASEKQ6P5S7 137 aaKnown RBP4.01□□□□□ -1.77
SF3B1-207ENST00000468925 CRIP3Q6Q6R5 217 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 ZNF818PQ6ZRF7 136 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 PPP1R32Q7Z5V6 425 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 ANKRD37Q7Z713 158 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 PPP1R27Q86WC6 154 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 TMEM25Q86YD3 366 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 SFTPA2Q8IWL1 248 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 SFTPA1Q8IWL2 248 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 BCL6BQ8N143 479 aaPredicted RBP4.01□□□□□ -1.77
SF3B1-207ENST00000468925 ZNF808Q8N4W9 903 aaPredicted RBP4.01□□□□□ -1.77
SF3B1-207ENST00000468925 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.01□□□□□ -1.77
SF3B1-207ENST00000468925 OR10G6Q8NH81 332 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 CACNG8Q8WXS5 425 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 CLDN23Q96B33 292 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 BORCS8Q96FH0 119 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 OXGR1Q96P68 337 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 RCHY1Q96PM5 261 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 SLC25A2Q9BXI2 301 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 ZNF442Q9H7R0 627 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 NGBQ9NPG2 151 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 MTCH1Q9NZJ7 389 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 CACNG5Q9UF02 275 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 MRPS17Q9Y2R5 130 aaKnown RBP4.01□□□□□ -1.77
SF3B1-207ENST00000468925 UFC1Q9Y3C8 167 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 ATG2AQ2TAZ0 1938 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 CPAMD8Q8IZJ3 1885 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 KIAA2026Q5HYC2 2103 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 A0A087X0K7 114 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 hCG_38984A0A1B0GV85 526 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 C21orf140B9A014 251 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 E9PLD3 99 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 LINC01619G3V211 115 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 CA3P07451 260 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 CT62P0C5K7 136 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 LINC00271P0C7V0 271 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 SRD5A1P18405 259 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 GCSHP23434 173 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 GCHFRP30047 84 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 CAMPP49913 170 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 RBM11P57052 281 aaKnown RBP4□□□□□ -1.77
SF3B1-207ENST00000468925 FBXW4P57775 412 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 MLF1P58340 268 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 CLRN1P58418 232 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 HBBP68871 147 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 FOXI1Q12951 378 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 CATR1Q13166 79 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 MFAP5Q13361 173 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 LYSMD4Q5XG99 296 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 TMEM215Q68D42 235 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 LCN12Q6JVE5 192 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 RHBDD2Q6NTF9 364 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 C2orf91Q6ZV80 131 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 PRSS41Q7RTY9 318 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 YRDCQ86U90 279 aaKnown RBP4□□□□□ -1.77
SF3B1-207ENST00000468925 ATOH7Q8N100 152 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 FAM19A2Q8N3H0 131 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 ZADH2Q8N4Q0 377 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 Q8TCH9 128 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 PTH2Q96A98 100 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 MMABQ96EY8 250 aaPredicted RBP4□□□□□ -1.77
SF3B1-207ENST00000468925 HINT2Q9BX68 163 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 TM2D2Q9BX73 214 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 MRPL32Q9BYC8 188 aaKnown RBP4□□□□□ -1.77
SF3B1-207ENST00000468925 SH2D2AQ9NP31 389 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 OR1A1Q9P1Q5 309 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 C19orf25Q9UFG5 118 aaPredicted RBP4□□□□□ -1.77
SF3B1-207ENST00000468925 PILRAQ9UKJ1 303 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 CACNA1CQ13936 2221 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 CENPFP49454 3210 aa4□□□□□ -1.77
SF3B1-207ENST00000468925 MUC3AQ02505 3323 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 ARID1AO14497 2285 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 TRBV20OR9-2A0A075B6H5 130 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 TRAV25A0A0B4J276 109 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 FBLL1A6NHQ2 334 aaKnown RBP3.99□□□□□ -1.77
SF3B1-207ENST00000468925 FABP5P3A8MUU1 101 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 A8MWL6 223 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 PATE3B3GLJ2 98 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 E9PLN8 166 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 F2Z2F3 143 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms