RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 TRAV38-1A0A0B4J264 116 aa1.98□□□□□ -2.09
HMGN3P1-201ENST00000453847 IGKV1-9A0A0C4DH69 117 aa1.98□□□□□ -2.09
HMGN3P1-201ENST00000453847 MSMBP08118 114 aa1.98□□□□□ -2.09
HMGN3P1-201ENST00000453847 MSNP26038 577 aaKnown RBP1.98□□□□□ -2.09
HMGN3P1-201ENST00000453847 PSMB8P28062 276 aa1.98□□□□□ -2.09
HMGN3P1-201ENST00000453847 GNG5P63218 68 aa1.98□□□□□ -2.09
HMGN3P1-201ENST00000453847 DR1Q01658 176 aa1.98□□□□□ -2.09
HMGN3P1-201ENST00000453847 LYZL1Q6UWQ5 148 aa1.98□□□□□ -2.09
HMGN3P1-201ENST00000453847 BRD3OSQ6XYD6 125 aa1.98□□□□□ -2.09
HMGN3P1-201ENST00000453847 LCA10Q71F78 164 aa1.98□□□□□ -2.09
HMGN3P1-201ENST00000453847 OR5J2Q8NH18 312 aa1.98□□□□□ -2.09
HMGN3P1-201ENST00000453847 PFN4Q8NHR9 129 aa1.98□□□□□ -2.09
HMGN3P1-201ENST00000453847 AMMECR1Q9Y4X0 333 aaPredicted RBP1.98□□□□□ -2.09
HMGN3P1-201ENST00000453847 SCAF11Q99590 1463 aaKnown RBP1.98□□□□□ -2.09
HMGN3P1-201ENST00000453847 MYH11P35749 1972 aa1.98□□□□□ -2.09
HMGN3P1-201ENST00000453847 KIF24Q5T7B8 1368 aa1.98□□□□□ -2.09
HMGN3P1-201ENST00000453847 TRBV19A0A075B6N1 114 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 TMSB15BA0A087X1C1 80 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 IGHV1-18A0A0C4DH31 117 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 A0A0G2JQZ4 141 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 IRGMA1A4Y4 181 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 RFPL4AA6NLU0 287 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 RFPL4AL1F8VTS6 287 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 H7C2G1 150 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 IFNA10P01566 189 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 SHBGP04278 402 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 RPS4Y1P22090 263 aaKnown RBP1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 PIGPP57054 158 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 KRTAP10-1P60331 282 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 NCALDP61601 193 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 RHOBP62745 196 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 ZNF90Q03938 601 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 LINC01554Q52M75 96 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 SPANXN3Q5MJ09 141 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 TRIQKQ629K1 86 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 BPIFA4PQ86YQ2 179 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 CLVS1Q8IUQ0 354 aaPredicted RBP1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 RPP25LQ8N5L8 163 aaKnown RBP1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 ADAT3Q96EY9 351 aaPredicted RBP1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 PCBD2Q9H0N5 130 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 TVP23BQ9NYZ1 205 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 PTPRBP23467 1997 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 MYH7BA7E2Y1 1941 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 IGKV3D-11A0A0A0MRZ8 115 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 A0A0D9SEW6 157 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 FNDC10F2Z333 226 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 H0YJX3 145 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 RPSAP08865 295 aaKnown RBP1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 SPI1P17947 270 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 ZNF181Q2M3W8 571 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 PABPC1L2AQ5JQF8 200 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 C3orf33Q6P1S2 294 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 OR13C6PQ8NH95 151 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 SPACA4Q8TDM5 124 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 ANP32BQ92688 251 aaKnown RBP1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 C2orf50Q96LR7 162 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 CHST6Q9GZX3 395 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 TMEM133Q9H2Q1 129 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 RNF122Q9H9V4 155 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 MRPL40Q9NQ50 206 aaKnown RBP1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 ERGIC3Q9Y282 383 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 SLC35A3Q9Y2D2 325 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 V9GYQ6 96 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 IGHV3-64A0A075B6Q5 118 aa1.95□□□□□ -2.1
HMGN3P1-201ENST00000453847 ZNF860A6NHJ4 632 aa1.95□□□□□ -2.1
HMGN3P1-201ENST00000453847 CREBL2O60519 120 aaPredicted RBP1.95□□□□□ -2.1
HMGN3P1-201ENST00000453847 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.95□□□□□ -2.1
HMGN3P1-201ENST00000453847 WFDC5Q8TCV5 224 aa1.95□□□□□ -2.1
HMGN3P1-201ENST00000453847 CXCL16Q9H2A7 254 aa1.95□□□□□ -2.1
HMGN3P1-201ENST00000453847 TIMM9Q9Y5J7 89 aa1.95□□□□□ -2.1
HMGN3P1-201ENST00000453847 G3V2T6 193 aa1.94□□□□□ -2.1
HMGN3P1-201ENST00000453847 J3QRK9 145 aa1.94□□□□□ -2.1
HMGN3P1-201ENST00000453847 PGLYRP1O75594 196 aaPredicted RBP1.94□□□□□ -2.1
HMGN3P1-201ENST00000453847 PEBP1P30086 187 aaKnown RBP1.94□□□□□ -2.1
HMGN3P1-201ENST00000453847 SERPINB1P30740 379 aa1.94□□□□□ -2.1
HMGN3P1-201ENST00000453847 AQP4P55087 323 aa1.94□□□□□ -2.1
HMGN3P1-201ENST00000453847 SNCBQ16143 134 aa1.94□□□□□ -2.1
HMGN3P1-201ENST00000453847 KRTAP6-3Q3LI67 103 aa1.94□□□□□ -2.1
HMGN3P1-201ENST00000453847 MIR17HGQ75NE6 70 aa1.94□□□□□ -2.1
HMGN3P1-201ENST00000453847 KTN1-AS1Q86SY8 53 aa1.94□□□□□ -2.1
HMGN3P1-201ENST00000453847 DCANP1Q8TF63 244 aa1.94□□□□□ -2.1
HMGN3P1-201ENST00000453847 DNAJC9Q8WXX5 260 aa1.94□□□□□ -2.1
HMGN3P1-201ENST00000453847 DNAJC30Q96LL9 226 aa1.94□□□□□ -2.1
HMGN3P1-201ENST00000453847 SH3BGRL3Q9H299 93 aa1.94□□□□□ -2.1
HMGN3P1-201ENST00000453847 MED1Q15648 1581 aaPredicted RBP1.93□□□□□ -2.1
HMGN3P1-201ENST00000453847 NCKAP5O14513 1909 aa1.93□□□□□ -2.1
HMGN3P1-201ENST00000453847 CCDC88CQ9P219 2028 aa1.93□□□□□ -2.1
HMGN3P1-201ENST00000453847 FMN1Q68DA7 1419 aa1.93□□□□□ -2.1
HMGN3P1-201ENST00000453847 NUMA1Q14980 2115 aa1.93□□□□□ -2.1
HMGN3P1-201ENST00000453847 PLXNA3P51805 1871 aa1.93□□□□□ -2.1
HMGN3P1-201ENST00000453847 SMARCA4P51532 1647 aa1.93□□□□□ -2.1
HMGN3P1-201ENST00000453847 TRBV10-2A0A0K0K1G8 114 aa1.93□□□□□ -2.1
HMGN3P1-201ENST00000453847 OR51F1A6NGY5 319 aa1.93□□□□□ -2.1
HMGN3P1-201ENST00000453847 C1orf196B1AJZ1 125 aa1.93□□□□□ -2.1
HMGN3P1-201ENST00000453847 SLC22A1O15245 554 aa1.93□□□□□ -2.1
HMGN3P1-201ENST00000453847 PIAS1O75925 651 aa1.93□□□□□ -2.1
HMGN3P1-201ENST00000453847 CASP1P29466 404 aa1.93□□□□□ -2.1
HMGN3P1-201ENST00000453847 RNASE4P34096 147 aaKnown RBP1.93□□□□□ -2.1
HMGN3P1-201ENST00000453847 PHBP35232 272 aa1.93□□□□□ -2.1
HMGN3P1-201ENST00000453847 EIF2B2P49770 351 aaKnown RBP1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms