RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 XKRXQ6PP77 449 aa3.12□□□□□ -1.91
USP54-206ENST00000433394 ANGPTL5Q86XS5 388 aa3.12□□□□□ -1.91
USP54-206ENST00000433394 OR6V1Q8N148 313 aa3.12□□□□□ -1.91
USP54-206ENST00000433394 SLC35F6Q8N357 371 aa3.12□□□□□ -1.91
USP54-206ENST00000433394 GRPEL2Q8TAA5 225 aa3.12□□□□□ -1.91
USP54-206ENST00000433394 SKA2Q8WVK7 121 aaPredicted RBP3.12□□□□□ -1.91
USP54-206ENST00000433394 OR5P3Q8WZ94 311 aa3.12□□□□□ -1.91
USP54-206ENST00000433394 RAB8BQ92930 207 aa3.12□□□□□ -1.91
USP54-206ENST00000433394 PKMYT1Q99640 499 aa3.12□□□□□ -1.91
USP54-206ENST00000433394 MND1Q9BWT6 205 aa3.12□□□□□ -1.91
USP54-206ENST00000433394 BIN3Q9NQY0 253 aa3.12□□□□□ -1.91
USP54-206ENST00000433394 GLTPQ9NZD2 209 aa3.12□□□□□ -1.91
USP54-206ENST00000433394 DKKL1Q9UK85 242 aa3.12□□□□□ -1.91
USP54-206ENST00000433394 MTCH2Q9Y6C9 303 aa3.12□□□□□ -1.91
USP54-206ENST00000433394 MKI67P46013 3256 aaKnown RBP3.12□□□□□ -1.91
USP54-206ENST00000433394 PLXNA3P51805 1871 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 GREB1Q4ZG55 1949 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 ALPK3Q96L96 1907 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 CXorf51AA0A1B0GTR3 108 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 A0A1B0GV90 55 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 PQLC2LA1A4F0 135 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 C21orf140B9A014 251 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 AZIN1O14977 448 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 MT-CO2P00403 227 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 TYMSP04818 313 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 S100A8P05109 93 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 OR4A8P0C604 315 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 SMIM6P0DI80 62 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 HIST1H1EP10412 219 aaKnown RBP3.11□□□□□ -1.91
USP54-206ENST00000433394 ORM2P19652 201 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 PSMB3P49720 205 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 SULT1A1P50225 295 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 TAS2R41P59536 307 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 CAV1Q03135 178 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 SMAGPQ0VAQ4 97 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 KRTAP25-1Q3LHN0 102 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 N4BP2L1Q5TBK1 243 aaPredicted RBP3.11□□□□□ -1.91
USP54-206ENST00000433394 SLC36A1Q7Z2H8 476 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 DEFB128Q7Z7B8 93 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 CROCCP2Q86T23 111 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 LRP11Q86VZ4 500 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 MMGT1Q8N4V1 131 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 CLDN22Q8N7P3 220 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 OR10K1Q8NGX5 313 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 OR10A6Q8NH74 314 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 ZNRF2Q8NHG8 242 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 DNAJC9Q8WXX5 260 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 TMEM203Q969S6 136 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 TMBIM1Q969X1 311 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 SMIM19Q96E16 107 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 CAPZA3Q96KX2 299 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 MCEEQ96PE7 176 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 C2orf88Q9BSF0 95 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 ZNF286AQ9HBT8 521 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 HHLA2Q9UM44 414 aa3.11□□□□□ -1.91
USP54-206ENST00000433394 RANBP2P49792 3224 aaKnown RBP3.1□□□□□ -1.91
USP54-206ENST00000433394 PRR14LQ5THK1 2151 aa3.1□□□□□ -1.91
USP54-206ENST00000433394 LAMA2P24043 3122 aaKnown RBP3.1□□□□□ -1.91
USP54-206ENST00000433394 PPP5D1E7EU14 171 aa3.1□□□□□ -1.91
USP54-206ENST00000433394 APOC4-APOC2K7ER74 178 aa3.1□□□□□ -1.91
USP54-206ENST00000433394 KPNA4O00629 521 aaPredicted RBP3.1□□□□□ -1.91
USP54-206ENST00000433394 CDS2O95674 445 aa3.1□□□□□ -1.91
USP54-206ENST00000433394 APOC2P02655 101 aa3.1□□□□□ -1.91
USP54-206ENST00000433394 CRYBA1P05813 215 aa3.1□□□□□ -1.91
USP54-206ENST00000433394 IFI30P13284 250 aa3.1□□□□□ -1.91
USP54-206ENST00000433394 ERP29P30040 261 aaKnown RBP3.1□□□□□ -1.91
USP54-206ENST00000433394 CCR7P32248 378 aa3.1□□□□□ -1.91
USP54-206ENST00000433394 PPP1CCP36873 323 aaKnown RBP3.1□□□□□ -1.91
USP54-206ENST00000433394 TCL1AP56279 114 aa3.1□□□□□ -1.91
USP54-206ENST00000433394 H2BFSP57053 126 aa3.1□□□□□ -1.91
USP54-206ENST00000433394 TCTAP57738 103 aa3.1□□□□□ -1.91
USP54-206ENST00000433394 NAA20P61599 178 aa3.1□□□□□ -1.91
USP54-206ENST00000433394 IFT20Q8IY31 132 aa3.1□□□□□ -1.91
USP54-206ENST00000433394 OR1M1Q8NGA1 313 aa3.1□□□□□ -1.91
USP54-206ENST00000433394 OR13D1Q8NGV5 346 aa3.1□□□□□ -1.91
USP54-206ENST00000433394 C11orf40Q8WZ69 217 aa3.1□□□□□ -1.91
USP54-206ENST00000433394 CPNE2Q96FN4 548 aaPredicted RBP3.1□□□□□ -1.91
USP54-206ENST00000433394 ABHD14BQ96IU4 210 aa3.1□□□□□ -1.91
USP54-206ENST00000433394 OR7D2Q96RA2 312 aa3.1□□□□□ -1.91
USP54-206ENST00000433394 VPS25Q9BRG1 176 aa3.1□□□□□ -1.91
USP54-206ENST00000433394 CDCA4Q9BXL8 241 aa3.1□□□□□ -1.91
USP54-206ENST00000433394 PECRQ9BY49 303 aa3.1□□□□□ -1.91
USP54-206ENST00000433394 FAIMQ9NVQ4 179 aa3.1□□□□□ -1.91
USP54-206ENST00000433394 UTP11Q9Y3A2 253 aaKnown RBP3.1□□□□□ -1.91
USP54-206ENST00000433394 DENND4CQ5VZ89 1909 aa3.1□□□□□ -1.91
USP54-206ENST00000433394 DOCK4Q8N1I0 1966 aa3.1□□□□□ -1.91
USP54-206ENST00000433394 SHROOM3Q8TF72 1996 aa3.1□□□□□ -1.91
USP54-206ENST00000433394 MYO7AQ13402 2215 aa3.09□□□□□ -1.91
USP54-206ENST00000433394 MYO16Q9Y6X6 1858 aa3.09□□□□□ -1.91
USP54-206ENST00000433394 NUP205Q92621 2012 aa3.09□□□□□ -1.91
USP54-206ENST00000433394 OR6C6A6NF89 314 aa3.09□□□□□ -1.91
USP54-206ENST00000433394 CCDC160A6NGH7 325 aa3.09□□□□□ -1.91
USP54-206ENST00000433394 A8MWP6 167 aa3.09□□□□□ -1.91
USP54-206ENST00000433394 SLC22A1O15245 554 aa3.09□□□□□ -1.91
USP54-206ENST00000433394 TPST1O60507 370 aa3.09□□□□□ -1.91
USP54-206ENST00000433394 BANF1O75531 89 aa3.09□□□□□ -1.91
USP54-206ENST00000433394 IFNA4P05014 189 aa3.09□□□□□ -1.91
USP54-206ENST00000433394 CST2P09228 141 aa3.09□□□□□ -1.91
USP54-206ENST00000433394 ATP6V0CP27449 155 aa3.09□□□□□ -1.91
USP54-206ENST00000433394 MIPP30301 263 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms