RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 GLRX5Q86SX6 157 aa11.8□□□□□ -0.52
PCDHGA11-201ENST00000398587 ZNF581Q9P0T4 197 aa11.8□□□□□ -0.52
PCDHGA11-201ENST00000398587 MLNRO43193 412 aa11.8□□□□□ -0.52
PCDHGA11-201ENST00000398587 TRGV3P03979 118 aa11.8□□□□□ -0.52
PCDHGA11-201ENST00000398587 THBDP07204 575 aa11.8□□□□□ -0.52
PCDHGA11-201ENST00000398587 RELBQ01201 579 aa11.8□□□□□ -0.52
PCDHGA11-201ENST00000398587 LOC389332A0A1B0GUA5 103 aa11.79□□□□□ -0.52
PCDHGA11-201ENST00000398587 SIAH2O43255 324 aa11.79□□□□□ -0.52
PCDHGA11-201ENST00000398587 IGKV1-5P01602 117 aa11.79□□□□□ -0.52
PCDHGA11-201ENST00000398587 METRNQ9UJH8 293 aa11.79□□□□□ -0.52
PCDHGA11-201ENST00000398587 TAS2R60P59551 318 aa11.79□□□□□ -0.52
PCDHGA11-201ENST00000398587 HERVK_113P61574 105 aa11.79□□□□□ -0.52
PCDHGA11-201ENST00000398587 ZNF474Q6S9Z5 364 aaPredicted RBP11.79□□□□□ -0.52
PCDHGA11-201ENST00000398587 A0A0G2JNJ9 132 aa11.79□□□□□ -0.52
PCDHGA11-201ENST00000398587 ANOS1P23352 680 aa11.79□□□□□ -0.52
PCDHGA11-201ENST00000398587 C1orf147Q96MC9 270 aaPredicted RBP11.79□□□□□ -0.52
PCDHGA11-201ENST00000398587 IL36BQ9NZH7 164 aa11.79□□□□□ -0.52
PCDHGA11-201ENST00000398587 Q9UFV3 132 aa11.79□□□□□ -0.52
PCDHGA11-201ENST00000398587 ZNF257Q9Y2Q1 563 aa11.79□□□□□ -0.52
PCDHGA11-201ENST00000398587 CX3CL1P78423 397 aa11.79□□□□□ -0.52
PCDHGA11-201ENST00000398587 SRSF3P84103 164 aaKnown RBP11.79□□□□□ -0.52
PCDHGA11-201ENST00000398587 Q1RN00 199 aa11.79□□□□□ -0.52
PCDHGA11-201ENST00000398587 ZNF672Q499Z4 452 aaPredicted RBP11.79□□□□□ -0.52
PCDHGA11-201ENST00000398587 NUP37Q8NFH4 326 aa11.79□□□□□ -0.52
PCDHGA11-201ENST00000398587 COQ2Q96H96 371 aa11.79□□□□□ -0.52
PCDHGA11-201ENST00000398587 MED13LQ71F56 2210 aa11.78□□□□□ -0.52
PCDHGA11-201ENST00000398587 TMEM178BH3BS89 294 aa11.78□□□□□ -0.52
PCDHGA11-201ENST00000398587 DENND4CQ5VZ89 1909 aa11.78□□□□□ -0.52
PCDHGA11-201ENST00000398587 LEPROTL1O95214 131 aa11.78□□□□□ -0.52
PCDHGA11-201ENST00000398587 CBLN1P23435 193 aa11.78□□□□□ -0.52
PCDHGA11-201ENST00000398587 RPL23P62829 140 aaKnown RBP11.78□□□□□ -0.52
PCDHGA11-201ENST00000398587 OR4C5Q8NGB2 326 aa11.78□□□□□ -0.52
PCDHGA11-201ENST00000398587 S4R3C0 116 aa11.78□□□□□ -0.52
PCDHGA11-201ENST00000398587 CCL20P78556 96 aa11.77□□□□□ -0.52
PCDHGA11-201ENST00000398587 C5orf24Q7Z6I8 188 aa11.77□□□□□ -0.52
PCDHGA11-201ENST00000398587 LINC00518Q8N0U6 118 aa11.77□□□□□ -0.52
PCDHGA11-201ENST00000398587 PMCHL1Q16048 86 aa11.77□□□□□ -0.53
PCDHGA11-201ENST00000398587 IFITM10A6NMD0 228 aa11.77□□□□□ -0.53
PCDHGA11-201ENST00000398587 LY6DQ14210 128 aa11.77□□□□□ -0.53
PCDHGA11-201ENST00000398587 C7orf69Q9H7B7 122 aa11.77□□□□□ -0.53
PCDHGA11-201ENST00000398587 IGHV3OR16-13A0A075B7E8 117 aa11.77□□□□□ -0.53
PCDHGA11-201ENST00000398587 IGHV3-74A0A0B4J1X5 117 aa11.77□□□□□ -0.53
PCDHGA11-201ENST00000398587 A0A0G2JLM5 398 aa11.77□□□□□ -0.53
PCDHGA11-201ENST00000398587 CD5P06127 495 aa11.77□□□□□ -0.53
PCDHGA11-201ENST00000398587 HBBP68871 147 aa11.77□□□□□ -0.53
PCDHGA11-201ENST00000398587 ZFP30Q9Y2G7 519 aa11.77□□□□□ -0.53
PCDHGA11-201ENST00000398587 SLC17A3O00476 420 aa11.76□□□□□ -0.53
PCDHGA11-201ENST00000398587 RNF151Q2KHN1 245 aa11.76□□□□□ -0.53
PCDHGA11-201ENST00000398587 TMEM14EPQ6UXP3 125 aa11.76□□□□□ -0.53
PCDHGA11-201ENST00000398587 OR4B1Q8NGF8 309 aa11.76□□□□□ -0.53
PCDHGA11-201ENST00000398587 SHANK1Q9Y566 2161 aa11.76□□□□□ -0.53
PCDHGA11-201ENST00000398587 GPR183P32249 361 aa11.76□□□□□ -0.53
PCDHGA11-201ENST00000398587 SCGB1D4Q6XE38 83 aa11.76□□□□□ -0.53
PCDHGA11-201ENST00000398587 TCF24Q7RTU0 167 aa11.76□□□□□ -0.53
PCDHGA11-201ENST00000398587 DTX1Q86Y01 620 aa11.76□□□□□ -0.53
PCDHGA11-201ENST00000398587 TCRBV4S1A1TA0A5B7 111 aa11.76□□□□□ -0.53
PCDHGA11-201ENST00000398587 GRIFINA4D1Z8 144 aa11.76□□□□□ -0.53
PCDHGA11-201ENST00000398587 PHLDA3Q9Y5J5 127 aa11.76□□□□□ -0.53
PCDHGA11-201ENST00000398587 AUP1Q9Y679 476 aa11.76□□□□□ -0.53
PCDHGA11-201ENST00000398587 IGKV1D-17A0A075B6S4 117 aa11.75□□□□□ -0.53
PCDHGA11-201ENST00000398587 TRAV9-1A0A075B6T8 112 aa11.75□□□□□ -0.53
PCDHGA11-201ENST00000398587 TRAV1-1A0A0B4J248 108 aa11.75□□□□□ -0.53
PCDHGA11-201ENST00000398587 A0A1W2PRE2 83 aa11.75□□□□□ -0.53
PCDHGA11-201ENST00000398587 PRB3Q04118 309 aaPredicted RBP11.75□□□□□ -0.53
PCDHGA11-201ENST00000398587 TMEM183AQ8IXX5 376 aa11.75□□□□□ -0.53
PCDHGA11-201ENST00000398587 TIMM23O14925 209 aa11.75□□□□□ -0.53
PCDHGA11-201ENST00000398587 TMEM200BQ69YZ2 307 aa11.75□□□□□ -0.53
PCDHGA11-201ENST00000398587 TREML4Q6UXN2 200 aa11.75□□□□□ -0.53
PCDHGA11-201ENST00000398587 VPS25Q9BRG1 176 aa11.75□□□□□ -0.53
PCDHGA11-201ENST00000398587 MUC6Q6W4X9 2439 aa11.75□□□□□ -0.53
PCDHGA11-201ENST00000398587 GTF3C1Q12789 2109 aa11.75□□□□□ -0.53
PCDHGA11-201ENST00000398587 FOXI3A8MTJ6 420 aaPredicted RBP11.75□□□□□ -0.53
PCDHGA11-201ENST00000398587 HLA-DRB1P01911 266 aa11.75□□□□□ -0.53
PCDHGA11-201ENST00000398587 GPX1P07203 203 aa11.75□□□□□ -0.53
PCDHGA11-201ENST00000398587 SCGB1C2P0DMR2 95 aa11.75□□□□□ -0.53
PCDHGA11-201ENST00000398587 EFNB3Q15768 340 aa11.75□□□□□ -0.53
PCDHGA11-201ENST00000398587 PVRIGQ6DKI7 326 aa11.75□□□□□ -0.53
PCDHGA11-201ENST00000398587 GPR82Q96P67 336 aa11.75□□□□□ -0.53
PCDHGA11-201ENST00000398587 NEU1Q99519 415 aa11.75□□□□□ -0.53
PCDHGA11-201ENST00000398587 MAP1LC3AQ9H492 121 aa11.75□□□□□ -0.53
PCDHGA11-201ENST00000398587 IGHV3-23P01764 117 aa11.75□□□□□ -0.53
PCDHGA11-201ENST00000398587 HERPUD1Q15011 391 aa11.75□□□□□ -0.53
PCDHGA11-201ENST00000398587 SYT8Q8NBV8 401 aa11.75□□□□□ -0.53
PCDHGA11-201ENST00000398587 ELOVL1Q9BW60 279 aa11.75□□□□□ -0.53
PCDHGA11-201ENST00000398587 MBNL3Q9NUK0 354 aaKnown RBP11.75□□□□□ -0.53
PCDHGA11-201ENST00000398587 DPRXA6NFQ7 191 aa11.74□□□□□ -0.53
PCDHGA11-201ENST00000398587 IGHV1-8P0DP01 117 aa11.74□□□□□ -0.53
PCDHGA11-201ENST00000398587 LYL1P12980 280 aa11.74□□□□□ -0.53
PCDHGA11-201ENST00000398587 CENPVQ7Z7K6 275 aaPredicted RBP11.74□□□□□ -0.53
PCDHGA11-201ENST00000398587 ANAPC10Q9UM13 185 aa11.74□□□□□ -0.53
PCDHGA11-201ENST00000398587 LBHQ53QV2 105 aaPredicted RBP11.74□□□□□ -0.53
PCDHGA11-201ENST00000398587 C20orf204Q6ZNR8 217 aa11.74□□□□□ -0.53
PCDHGA11-201ENST00000398587 RSPO1Q2MKA7 263 aaPredicted RBP11.74□□□□□ -0.53
PCDHGA11-201ENST00000398587 FMC1Q96HJ9 113 aa11.74□□□□□ -0.53
PCDHGA11-201ENST00000398587 HS3ST6Q96QI5 342 aa11.74□□□□□ -0.53
PCDHGA11-201ENST00000398587 GGTLC1Q9BX51 225 aa11.74□□□□□ -0.53
PCDHGA11-201ENST00000398587 A1L4Q6 167 aa11.74□□□□□ -0.53
PCDHGA11-201ENST00000398587 TSPOP30536 169 aa11.74□□□□□ -0.53
PCDHGA11-201ENST00000398587 ADIPOQQ15848 244 aa11.74□□□□□ -0.53
PCDHGA11-201ENST00000398587 C2orf83Q53S99 150 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms