RNA–Protein interactions for RNA: ENST00000395366.2

PPP1CB-203, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 4,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-203ENST00000395366 CCL19Q99731 98 aa12.16□□□□□ -0.46
PPP1CB-203ENST00000395366 MOSP00540 346 aa12.15□□□□□ -0.46
PPP1CB-203ENST00000395366 IGLV1-44P01699 117 aa12.15□□□□□ -0.46
PPP1CB-203ENST00000395366 CA7P43166 264 aa12.15□□□□□ -0.46
PPP1CB-203ENST00000395366 PYY3Q5JQD4 70 aa12.15□□□□□ -0.46
PPP1CB-203ENST00000395366 GAFA1Q96PS6 74 aa12.15□□□□□ -0.46
PPP1CB-203ENST00000395366 PITPNC1Q9UKF7 332 aa12.15□□□□□ -0.46
PPP1CB-203ENST00000395366 A0A0G2JRQ6 117 aa12.15□□□□□ -0.46
PPP1CB-203ENST00000395366 PGPA6NDG6 321 aa12.15□□□□□ -0.46
PPP1CB-203ENST00000395366 LINC00473A8K010 186 aa12.15□□□□□ -0.46
PPP1CB-203ENST00000395366 PMCHP20382 165 aa12.15□□□□□ -0.46
PPP1CB-203ENST00000395366 LMO1P25800 156 aa12.15□□□□□ -0.46
PPP1CB-203ENST00000395366 LINC00205P59089 165 aa12.15□□□□□ -0.46
PPP1CB-203ENST00000395366 ERVK11-1P61568 191 aa12.15□□□□□ -0.46
PPP1CB-203ENST00000395366 ZNF788Q6ZQV5 615 aa12.15□□□□□ -0.46
PPP1CB-203ENST00000395366 CLDND2Q8NHS1 167 aa12.15□□□□□ -0.46
PPP1CB-203ENST00000395366 MFAP4P55083 255 aa12.15□□□□□ -0.46
PPP1CB-203ENST00000395366 HOXA4Q00056 320 aaPredicted RBP12.15□□□□□ -0.46
PPP1CB-203ENST00000395366 TMEM200BQ69YZ2 307 aa12.15□□□□□ -0.46
PPP1CB-203ENST00000395366 IGKV1D-33P01593 117 aa12.15□□□□□ -0.47
PPP1CB-203ENST00000395366 IGKV1-33P01594 117 aa12.15□□□□□ -0.47
PPP1CB-203ENST00000395366 LYL1P12980 280 aa12.15□□□□□ -0.47
PPP1CB-203ENST00000395366 CRISP2P16562 243 aa12.15□□□□□ -0.47
PPP1CB-203ENST00000395366 CRYBB3P26998 211 aa12.15□□□□□ -0.47
PPP1CB-203ENST00000395366 RIPPLY3P57055 190 aa12.15□□□□□ -0.47
PPP1CB-203ENST00000395366 KRTDAPP60985 99 aa12.15□□□□□ -0.47
PPP1CB-203ENST00000395366 CYP2G1PQ6ZSU1 146 aa12.15□□□□□ -0.47
PPP1CB-203ENST00000395366 COL25A1Q9BXS0 654 aaPredicted RBP12.15□□□□□ -0.47
PPP1CB-203ENST00000395366 S100A4P26447 101 aaKnown RBP12.14□□□□□ -0.47
PPP1CB-203ENST00000395366 SRP14P37108 136 aaKnown RBP12.14□□□□□ -0.47
PPP1CB-203ENST00000395366 IGF2-ASQ6U949 168 aa12.14□□□□□ -0.47
PPP1CB-203ENST00000395366 ST6GALNAC3Q8NDV1 305 aa12.14□□□□□ -0.47
PPP1CB-203ENST00000395366 NEUROG1Q92886 237 aa12.14□□□□□ -0.47
PPP1CB-203ENST00000395366 FAM90A9PA6NNJ1 464 aa12.14□□□□□ -0.47
PPP1CB-203ENST00000395366 THBDP07204 575 aa12.14□□□□□ -0.47
PPP1CB-203ENST00000395366 HIST1H1EP10412 219 aaKnown RBP12.14□□□□□ -0.47
PPP1CB-203ENST00000395366 HOXA5P20719 270 aa12.14□□□□□ -0.47
PPP1CB-203ENST00000395366 IER3P46695 156 aa12.14□□□□□ -0.47
PPP1CB-203ENST00000395366 FAM3BP58499 235 aaPredicted RBP12.14□□□□□ -0.47
PPP1CB-203ENST00000395366 Q6ZRM9 215 aa12.14□□□□□ -0.47
PPP1CB-203ENST00000395366 BPIFA4PQ86YQ2 179 aa12.14□□□□□ -0.47
PPP1CB-203ENST00000395366 OR5R1Q8NH85 324 aa12.14□□□□□ -0.47
PPP1CB-203ENST00000395366 SSC4DQ8WTU2 575 aa12.14□□□□□ -0.47
PPP1CB-203ENST00000395366 IGHV3OR16-10A0A075B7F0 116 aa12.14□□□□□ -0.47
PPP1CB-203ENST00000395366 COX19Q49B96 90 aa12.14□□□□□ -0.47
PPP1CB-203ENST00000395366 K7EM74 188 aa12.13□□□□□ -0.47
PPP1CB-203ENST00000395366 GCGP01275 180 aa12.13□□□□□ -0.47
PPP1CB-203ENST00000395366 LDLRAD2Q5SZI1 272 aa12.13□□□□□ -0.47
PPP1CB-203ENST00000395366 CACNG8Q8WXS5 425 aa12.13□□□□□ -0.47
PPP1CB-203ENST00000395366 MRPL32Q9BYC8 188 aaKnown RBP12.13□□□□□ -0.47
PPP1CB-203ENST00000395366 CHODLQ9H9P2 273 aa12.13□□□□□ -0.47
PPP1CB-203ENST00000395366 TRGC2P03986 189 aa12.13□□□□□ -0.47
PPP1CB-203ENST00000395366 GATA2P23769 480 aaPredicted RBP12.13□□□□□ -0.47
PPP1CB-203ENST00000395366 CCKARP32238 428 aa12.13□□□□□ -0.47
PPP1CB-203ENST00000395366 CCL20P78556 96 aa12.13□□□□□ -0.47
PPP1CB-203ENST00000395366 UNQ6494/PRO21346Q6UXR6 183 aa12.13□□□□□ -0.47
PPP1CB-203ENST00000395366 TBX15Q96SF7 602 aa12.13□□□□□ -0.47
PPP1CB-203ENST00000395366 SNURFLB1AK76 121 aa12.13□□□□□ -0.47
PPP1CB-203ENST00000395366 TGIF2-C20orf24A0A0A6YYL0 155 aa12.12□□□□□ -0.47
PPP1CB-203ENST00000395366 TMEM238LA0A1B0GVL6 79 aa12.12□□□□□ -0.47
PPP1CB-203ENST00000395366 FOXI3A8MTJ6 420 aaPredicted RBP12.12□□□□□ -0.47
PPP1CB-203ENST00000395366 FCGR2BP31994 310 aaPredicted RBP12.12□□□□□ -0.47
PPP1CB-203ENST00000395366 TMEM144Q7Z5S9 345 aa12.12□□□□□ -0.47
PPP1CB-203ENST00000395366 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.12□□□□□ -0.474e-8■■■■□ 25.5
PPP1CB-203ENST00000395366 YLPM1P49750 1951 aaKnown RBP12.12□□□□□ -0.47
PPP1CB-203ENST00000395366 IGKV3-7A0A075B6H7 116 aa12.12□□□□□ -0.47
PPP1CB-203ENST00000395366 WDR25Q64LD2 544 aaPredicted RBP12.12□□□□□ -0.47
PPP1CB-203ENST00000395366 E7EQL1 145 aa12.12□□□□□ -0.47
PPP1CB-203ENST00000395366 PRCDQ00LT1 54 aa12.12□□□□□ -0.47
PPP1CB-203ENST00000395366 ZNF585BQ52M93 769 aa12.12□□□□□ -0.47
PPP1CB-203ENST00000395366 Q6ZSR3 168 aa12.12□□□□□ -0.47
PPP1CB-203ENST00000395366 OR52E5Q8NH55 327 aa12.12□□□□□ -0.47
PPP1CB-203ENST00000395366 EREGO14944 169 aa12.12□□□□□ -0.47
PPP1CB-203ENST00000395366 ZNF253O75346 499 aa12.12□□□□□ -0.47
PPP1CB-203ENST00000395366 PRNTQ86SH4 94 aa12.12□□□□□ -0.47
PPP1CB-203ENST00000395366 WDR83OSQ9Y284 106 aa12.12□□□□□ -0.47
PPP1CB-203ENST00000395366 TRAV30A0A087WSZ9 112 aa12.11□□□□□ -0.47
PPP1CB-203ENST00000395366 H3BTX0 84 aa12.11□□□□□ -0.47
PPP1CB-203ENST00000395366 CEACAM4O75871 244 aa12.11□□□□□ -0.47
PPP1CB-203ENST00000395366 C3orf36Q3SXR2 165 aa12.11□□□□□ -0.47
PPP1CB-203ENST00000395366 RNASEH2CQ8TDP1 164 aaKnown RBP12.11□□□□□ -0.47
PPP1CB-203ENST00000395366 SRD5A3Q9H8P0 318 aa12.11□□□□□ -0.47
PPP1CB-203ENST00000395366 TMEM238C9JI98 176 aa12.11□□□□□ -0.47
PPP1CB-203ENST00000395366 KRTAP27-1Q3LI81 207 aa12.11□□□□□ -0.47
PPP1CB-203ENST00000395366 RNASEKQ6P5S7 137 aaKnown RBP12.11□□□□□ -0.47
PPP1CB-203ENST00000395366 REG4Q9BYZ8 158 aa12.11□□□□□ -0.47
PPP1CB-203ENST00000395366 VSIRQ9H7M9 311 aa12.11□□□□□ -0.47
PPP1CB-203ENST00000395366 RFNGQ9Y644 331 aa12.11□□□□□ -0.47
PPP1CB-203ENST00000395366 CGAP01215 116 aa12.11□□□□□ -0.47
PPP1CB-203ENST00000395366 SLC35B1P78383 322 aa12.11□□□□□ -0.47
PPP1CB-203ENST00000395366 IBA57Q5T440 356 aaKnown RBP12.11□□□□□ -0.47
PPP1CB-203ENST00000395366 LINC00305Q7Z4B0 112 aa12.11□□□□□ -0.47
PPP1CB-203ENST00000395366 NEU1Q99519 415 aa12.11□□□□□ -0.47
PPP1CB-203ENST00000395366 ABCA1O95477 2261 aa12.11□□□□□ -0.47
PPP1CB-203ENST00000395366 TRAV3A0A0B4J244 114 aa12.1□□□□□ -0.47
PPP1CB-203ENST00000395366 IGHV1-8P0DP01 117 aa12.1□□□□□ -0.47
PPP1CB-203ENST00000395366 ICAM4Q14773 271 aa12.1□□□□□ -0.47
PPP1CB-203ENST00000395366 TMEM14EPQ6UXP3 125 aa12.1□□□□□ -0.47
PPP1CB-203ENST00000395366 PF4V1P10720 104 aa12.1□□□□□ -0.47
PPP1CB-203ENST00000395366 AGAP20933 346 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms