RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 CACNG8Q8WXS5 425 aa6.99□□□□□ -1.29
SNX27-201ENST00000368838 ATP5SQ99766 215 aa6.99□□□□□ -1.29
SNX27-201ENST00000368838 QTRT1Q9BXR0 403 aaKnown RBP6.99□□□□□ -1.29
SNX27-201ENST00000368838 COMMD5Q9GZQ3 224 aa6.99□□□□□ -1.29
SNX27-201ENST00000368838 MAGT1Q9H0U3 335 aa6.99□□□□□ -1.29
SNX27-201ENST00000368838 C1RLQ9NZP8 487 aa6.99□□□□□ -1.29
SNX27-201ENST00000368838 SIGLEC9Q9Y336 463 aa6.99□□□□□ -1.29
SNX27-201ENST00000368838 OR51B2Q9Y5P1 312 aa6.99□□□□□ -1.29
SNX27-201ENST00000368838 PLXNB1O43157 2135 aa6.98□□□□□ -1.29
SNX27-201ENST00000368838 TRAV3A0A0B4J244 114 aa6.98□□□□□ -1.29
SNX27-201ENST00000368838 IGHV1-69DA0A0B4J2H0 117 aa6.98□□□□□ -1.29
SNX27-201ENST00000368838 C15orf62A8K5M9 175 aa6.98□□□□□ -1.29
SNX27-201ENST00000368838 CEBPZOSA8MTT3 80 aa6.98□□□□□ -1.29
SNX27-201ENST00000368838 CLDN34H7C241 214 aa6.98□□□□□ -1.29
SNX27-201ENST00000368838 TIMM23O14925 209 aa6.98□□□□□ -1.29
SNX27-201ENST00000368838 NPFFO15130 113 aa6.98□□□□□ -1.29
SNX27-201ENST00000368838 IFNA17P01571 189 aa6.98□□□□□ -1.29
SNX27-201ENST00000368838 IGHV1-69P01742 117 aa6.98□□□□□ -1.29
SNX27-201ENST00000368838 CRYBA1P05813 215 aa6.98□□□□□ -1.29
SNX27-201ENST00000368838 NMBP08949 121 aa6.98□□□□□ -1.29
SNX27-201ENST00000368838 SULT1A2P50226 295 aa6.98□□□□□ -1.29
SNX27-201ENST00000368838 F2RL1P55085 397 aa6.98□□□□□ -1.29
SNX27-201ENST00000368838 OR2B8PP59922 312 aa6.98□□□□□ -1.29
SNX27-201ENST00000368838 KRTAP10-3P60369 221 aa6.98□□□□□ -1.29
SNX27-201ENST00000368838 RAB14P61106 215 aa6.98□□□□□ -1.29
SNX27-201ENST00000368838 RAB11AP62491 216 aa6.98□□□□□ -1.29
SNX27-201ENST00000368838 DLK1P80370 383 aa6.98□□□□□ -1.29
SNX27-201ENST00000368838 LRRC75BQ2VPJ9 315 aa6.98□□□□□ -1.29
SNX27-201ENST00000368838 DPPA3Q6W0C5 159 aa6.98□□□□□ -1.29
SNX27-201ENST00000368838 MOB3BQ86TA1 216 aa6.98□□□□□ -1.29
SNX27-201ENST00000368838 SLC24A4Q8NFF2 622 aa6.98□□□□□ -1.29
SNX27-201ENST00000368838 OR10P1Q8NGE3 313 aa6.98□□□□□ -1.29
SNX27-201ENST00000368838 OR1L6Q8NGR2 347 aa6.98□□□□□ -1.29
SNX27-201ENST00000368838 OR5C1Q8NGR4 320 aa6.98□□□□□ -1.29
SNX27-201ENST00000368838 LYPD6BQ8NI32 183 aa6.98□□□□□ -1.29
SNX27-201ENST00000368838 RNASEH2CQ8TDP1 164 aaKnown RBP6.98□□□□□ -1.29
SNX27-201ENST00000368838 TMEM68Q96MH6 324 aa6.98□□□□□ -1.29
SNX27-201ENST00000368838 TMEM147Q9BVK8 224 aa6.98□□□□□ -1.29
SNX27-201ENST00000368838 PRDM13Q9H4Q3 707 aa6.98□□□□□ -1.29
SNX27-201ENST00000368838 ZNF580Q9UK33 172 aa6.98□□□□□ -1.29
SNX27-201ENST00000368838 A0A0U1RQK1 487 aa6.97□□□□□ -1.29
SNX27-201ENST00000368838 LOC100996750A0A140TA64 210 aa6.97□□□□□ -1.29
SNX27-201ENST00000368838 A0A1W2PRD5 423 aa6.97□□□□□ -1.29
SNX27-201ENST00000368838 A0A1W2PRF3 423 aa6.97□□□□□ -1.29
SNX27-201ENST00000368838 A0A1W2PRM7 423 aa6.97□□□□□ -1.29
SNX27-201ENST00000368838 CORTO00230 105 aa6.97□□□□□ -1.29
SNX27-201ENST00000368838 NBR2O15453 112 aa6.97□□□□□ -1.29
SNX27-201ENST00000368838 RBMXL2O75526 392 aaKnown RBP6.97□□□□□ -1.29
SNX27-201ENST00000368838 BRI3O95415 125 aa6.97□□□□□ -1.29
SNX27-201ENST00000368838 IGHV4-59P01825 116 aa6.97□□□□□ -1.29
SNX27-201ENST00000368838 FAM106CPP0CH98 169 aa6.97□□□□□ -1.29
SNX27-201ENST00000368838 GPX4P36969 197 aaPredicted RBP6.97□□□□□ -1.29
SNX27-201ENST00000368838 REG1BP48304 166 aa6.97□□□□□ -1.29
SNX27-201ENST00000368838 ERHP84090 104 aaKnown RBP6.97□□□□□ -1.29
SNX27-201ENST00000368838 PMS2P11Q13670 270 aa6.97□□□□□ -1.29
SNX27-201ENST00000368838 RPL7L1Q6DKI1 246 aaKnown RBP6.97□□□□□ -1.29
SNX27-201ENST00000368838 HIST2H2BDQ6DRA6 164 aa6.97□□□□□ -1.29
SNX27-201ENST00000368838 ZNF562Q6V9R5 426 aa6.97□□□□□ -1.29
SNX27-201ENST00000368838 Q6YL49 198 aa6.97□□□□□ -1.29
SNX27-201ENST00000368838 SSX9Q7RTT3 188 aa6.97□□□□□ -1.29
SNX27-201ENST00000368838 HAPLN4Q86UW8 402 aa6.97□□□□□ -1.29
SNX27-201ENST00000368838 VKORC1L1Q8N0U8 176 aa6.97□□□□□ -1.29
SNX27-201ENST00000368838 OR4C12Q96R67 309 aa6.97□□□□□ -1.29
SNX27-201ENST00000368838 KRTAP4-6Q9BYQ5 205 aa6.97□□□□□ -1.29
SNX27-201ENST00000368838 ZNF430Q9H8G1 570 aaPredicted RBP6.97□□□□□ -1.29
SNX27-201ENST00000368838 PLEKHA3Q9HB20 300 aa6.97□□□□□ -1.29
SNX27-201ENST00000368838 WFDC1Q9HC57 220 aa6.97□□□□□ -1.29
SNX27-201ENST00000368838 ZC4H2Q9NQZ6 224 aa6.97□□□□□ -1.29
SNX27-201ENST00000368838 CGB1A6NKQ9 187 aa6.96□□□□□ -1.3
SNX27-201ENST00000368838 NDUFS6O75380 124 aaKnown RBP6.96□□□□□ -1.3
SNX27-201ENST00000368838 IFNA5P01569 189 aa6.96□□□□□ -1.3
SNX27-201ENST00000368838 HLA-DRB1P01911 266 aa6.96□□□□□ -1.3
SNX27-201ENST00000368838 NPY1RP25929 384 aa6.96□□□□□ -1.3
SNX27-201ENST00000368838 SAA4P35542 130 aa6.96□□□□□ -1.3
SNX27-201ENST00000368838 SUB1P53999 127 aaKnown RBP eCLIP6.96□□□□□ -1.3
SNX27-201ENST00000368838 BLOC1S1P78537 153 aa6.96□□□□□ -1.3
SNX27-201ENST00000368838 C5orf64Q2M2E5 130 aa6.96□□□□□ -1.3
SNX27-201ENST00000368838 SPANXN5Q5MJ07 72 aa6.96□□□□□ -1.3
SNX27-201ENST00000368838 C16orf82Q7Z2V1 217 aa6.96□□□□□ -1.3
SNX27-201ENST00000368838 LHFPL4Q7Z7J7 247 aa6.96□□□□□ -1.3
SNX27-201ENST00000368838 OR4F5Q8NH21 305 aa6.96□□□□□ -1.3
SNX27-201ENST00000368838 TMEM170AQ8WVE7 144 aa6.96□□□□□ -1.3
SNX27-201ENST00000368838 SSBP4Q9BWG4 385 aaPredicted RBP6.96□□□□□ -1.3
SNX27-201ENST00000368838 WDR61Q9GZS3 305 aaKnown RBP6.96□□□□□ -1.3
SNX27-201ENST00000368838 ENY2Q9NPA8 101 aa6.96□□□□□ -1.3
SNX27-201ENST00000368838 HEYLQ9NQ87 328 aaPredicted RBP6.96□□□□□ -1.3
SNX27-201ENST00000368838 PARP11Q9NR21 331 aa6.96□□□□□ -1.3
SNX27-201ENST00000368838 WDR83OSQ9Y284 106 aa6.96□□□□□ -1.3
SNX27-201ENST00000368838 LSM4Q9Y4Z0 139 aaKnown RBP6.96□□□□□ -1.3
SNX27-201ENST00000368838 TRAV1-1A0A0B4J248 108 aa6.95□□□□□ -1.3
SNX27-201ENST00000368838 IGLC7A0M8Q6 106 aa6.95□□□□□ -1.3
SNX27-201ENST00000368838 CLPSL1A2RUU4 121 aa6.95□□□□□ -1.3
SNX27-201ENST00000368838 M0QZK8 103 aa6.95□□□□□ -1.3
SNX27-201ENST00000368838 SLC25A17O43808 307 aa6.95□□□□□ -1.3
SNX27-201ENST00000368838 CST7O76096 145 aa6.95□□□□□ -1.3
SNX27-201ENST00000368838 IGKV1D-33P01593 117 aa6.95□□□□□ -1.3
SNX27-201ENST00000368838 IGKV1-33P01594 117 aa6.95□□□□□ -1.3
SNX27-201ENST00000368838 CRYGCP07315 174 aa6.95□□□□□ -1.3
SNX27-201ENST00000368838 METTL15P1P0C7V9 234 aa6.95□□□□□ -1.3
SNX27-201ENST00000368838 RNASE2P10153 161 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms