RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 SRPXP78539 464 aa13.72□□□□□ -0.21
USF2-202ENST00000343550 PPP1R1AQ13522 171 aa13.72□□□□□ -0.21
USF2-202ENST00000343550 NMSQ5H8A3 153 aa13.72□□□□□ -0.21
USF2-202ENST00000343550 SCARB1Q8WTV0 552 aa13.72□□□□□ -0.21
USF2-202ENST00000343550 CCDC32Q9BV29 185 aa13.72□□□□□ -0.21
USF2-202ENST00000343550 FLVCR2Q9UPI3 526 aa13.72□□□□□ -0.21
USF2-202ENST00000343550 RYR3Q15413 4870 aa13.72□□□□□ -0.21
USF2-202ENST00000343550 IGHV3-21A0A0B4J1V1 117 aa13.71□□□□□ -0.21
USF2-202ENST00000343550 SFT2D2O95562 160 aa13.71□□□□□ -0.21
USF2-202ENST00000343550 ANKRD55Q3KP44 614 aa13.71□□□□□ -0.21
USF2-202ENST00000343550 GPHB5Q86YW7 130 aa13.71□□□□□ -0.21
USF2-202ENST00000343550 LRTM2Q8N967 370 aa13.71□□□□□ -0.21
USF2-202ENST00000343550 SULT1A3P0DMM9 295 aa13.7□□□□□ -0.22
USF2-202ENST00000343550 SULT1A4P0DMN0 295 aa13.7□□□□□ -0.22
USF2-202ENST00000343550 SNCAP37840 140 aa13.7□□□□□ -0.22
USF2-202ENST00000343550 UBE2MP61081 183 aaKnown RBP13.7□□□□□ -0.22
USF2-202ENST00000343550 PIGBOS1A0A0B4J2F0 54 aa13.69□□□□□ -0.22
USF2-202ENST00000343550 I3L2K1 104 aa13.69□□□□□ -0.22
USF2-202ENST00000343550 LYRM1O43325 122 aa13.69□□□□□ -0.22
USF2-202ENST00000343550 CSN3P07498 182 aa13.69□□□□□ -0.22
USF2-202ENST00000343550 SPNP16150 400 aa13.69□□□□□ -0.22
USF2-202ENST00000343550 GPR183P32249 361 aa13.69□□□□□ -0.22
USF2-202ENST00000343550 PVRIGQ6DKI7 326 aa13.69□□□□□ -0.22
USF2-202ENST00000343550 SBSPONQ8IVN8 264 aa13.69□□□□□ -0.22
USF2-202ENST00000343550 MISP3Q96FF7 219 aa13.69□□□□□ -0.22
USF2-202ENST00000343550 ENY2Q9NPA8 101 aa13.69□□□□□ -0.22
USF2-202ENST00000343550 ZC4H2Q9NQZ6 224 aa13.69□□□□□ -0.22
USF2-202ENST00000343550 C21orf62Q9NYP8 219 aa13.69□□□□□ -0.22
USF2-202ENST00000343550 SORL1Q92673 2214 aa13.69□□□□□ -0.22
USF2-202ENST00000343550 DUXBA0A1W2PPF3 345 aa13.69□□□□□ -0.22
USF2-202ENST00000343550 F8W735 103 aaPredicted RBP13.69□□□□□ -0.22
USF2-202ENST00000343550 C3orf84H3BNL1 204 aa13.69□□□□□ -0.22
USF2-202ENST00000343550 LGALS9O00182 355 aa13.69□□□□□ -0.22
USF2-202ENST00000343550 RNASE2P10153 161 aaKnown RBP13.69□□□□□ -0.22
USF2-202ENST00000343550 HOXA1P49639 335 aaPredicted RBP13.69□□□□□ -0.22
USF2-202ENST00000343550 SMCO1Q147U7 214 aa13.69□□□□□ -0.22
USF2-202ENST00000343550 PLET1Q6UQ28 207 aa13.69□□□□□ -0.22
USF2-202ENST00000343550 ATP6V0BQ99437 205 aa13.69□□□□□ -0.22
USF2-202ENST00000343550 SIGLEC8Q9NYZ4 499 aa13.69□□□□□ -0.22
USF2-202ENST00000343550 PEMTQ9UBM1 199 aa13.69□□□□□ -0.22
USF2-202ENST00000343550 CACFD1Q9UGQ2 172 aa13.69□□□□□ -0.22
USF2-202ENST00000343550 A0A1B0GU03 582 aa13.68□□□□□ -0.22
USF2-202ENST00000343550 C9orf170A2RU37 121 aa13.68□□□□□ -0.22
USF2-202ENST00000343550 OR2T8A6NH00 312 aa13.68□□□□□ -0.22
USF2-202ENST00000343550 MT-CO2P00403 227 aa13.68□□□□□ -0.22
USF2-202ENST00000343550 IGLV1-51P01701 117 aa13.68□□□□□ -0.22
USF2-202ENST00000343550 GP9P14770 177 aa13.68□□□□□ -0.22
USF2-202ENST00000343550 SUB1P53999 127 aaKnown RBP eCLIP13.68□□□□□ -0.22
USF2-202ENST00000343550 BSXQ3C1V8 233 aa13.68□□□□□ -0.22
USF2-202ENST00000343550 FAM106AQ4KMX7 169 aa13.68□□□□□ -0.22
USF2-202ENST00000343550 TGOLN2O43493 480 aa13.67□□□□□ -0.22
USF2-202ENST00000343550 OR4E1P0C645 316 aa13.67□□□□□ -0.22
USF2-202ENST00000343550 ADAMTSL5Q6ZMM2 481 aa13.67□□□□□ -0.22
USF2-202ENST00000343550 HAPLN4Q86UW8 402 aa13.67□□□□□ -0.22
USF2-202ENST00000343550 PINX1Q96BK5 328 aaKnown RBP13.67□□□□□ -0.22
USF2-202ENST00000343550 BSCL2Q96G97 398 aaPredicted RBP13.67□□□□□ -0.22
USF2-202ENST00000343550 HEYLQ9NQ87 328 aaPredicted RBP13.67□□□□□ -0.22
USF2-202ENST00000343550 CEBPZOSA8MTT3 80 aa13.66□□□□□ -0.22
USF2-202ENST00000343550 NXPH3O95157 252 aa13.66□□□□□ -0.22
USF2-202ENST00000343550 ANXA7P20073 488 aaKnown RBP13.66□□□□□ -0.22
USF2-202ENST00000343550 TNFRSF9Q07011 255 aa13.66□□□□□ -0.22
USF2-202ENST00000343550 ZNF846Q147U1 533 aa13.66□□□□□ -0.22
USF2-202ENST00000343550 SPSB3Q6PJ21 355 aa13.66□□□□□ -0.22
USF2-202ENST00000343550 TXN2Q99757 166 aa13.66□□□□□ -0.22
USF2-202ENST00000343550 CHRDL1Q9BU40 450 aa13.66□□□□□ -0.22
USF2-202ENST00000343550 WDR12Q9GZL7 423 aaKnown RBP13.66□□□□□ -0.22
USF2-202ENST00000343550 HSPB7Q9UBY9 170 aa13.66□□□□□ -0.22
USF2-202ENST00000343550 TMED3Q9Y3Q3 217 aa13.66□□□□□ -0.22
USF2-202ENST00000343550 STAB2Q8WWQ8 2551 aa13.66□□□□□ -0.22
USF2-202ENST00000343550 IGHV3-35A0A0C4DH35 117 aa13.65□□□□□ -0.22
USF2-202ENST00000343550 ZNF320A2RRD8 509 aa13.65□□□□□ -0.22
USF2-202ENST00000343550 PITX3O75364 302 aa13.65□□□□□ -0.22
USF2-202ENST00000343550 IGHV3-48P01763 117 aa13.65□□□□□ -0.22
USF2-202ENST00000343550 TCRBP04435 133 aa13.65□□□□□ -0.22
USF2-202ENST00000343550 CTSGP08311 255 aa13.65□□□□□ -0.22
USF2-202ENST00000343550 FRMD6-AS1P0C7T7 363 aa13.65□□□□□ -0.22
USF2-202ENST00000343550 SLC25A6P12236 298 aa13.65□□□□□ -0.22
USF2-202ENST00000343550 FCGR2BP31994 310 aaPredicted RBP13.65□□□□□ -0.22
USF2-202ENST00000343550 ADMP35318 185 aa13.65□□□□□ -0.22
USF2-202ENST00000343550 HTR2BP41595 481 aa13.65□□□□□ -0.22
USF2-202ENST00000343550 MFAP4P55083 255 aa13.65□□□□□ -0.22
USF2-202ENST00000343550 DHRS2Q13268 280 aa13.65□□□□□ -0.22
USF2-202ENST00000343550 Q56UQ5 140 aa13.65□□□□□ -0.22
USF2-202ENST00000343550 UBAC2Q8NBM4 344 aa13.65□□□□□ -0.22
USF2-202ENST00000343550 RCHY1Q96PM5 261 aa13.65□□□□□ -0.22
USF2-202ENST00000343550 ZNF436Q9C0F3 470 aaPredicted RBP13.65□□□□□ -0.22
USF2-202ENST00000343550 C2orf70A6NJV1 201 aa13.64□□□□□ -0.23
USF2-202ENST00000343550 HOXB5P09067 269 aa13.64□□□□□ -0.23
USF2-202ENST00000343550 MLANAQ16655 118 aa13.64□□□□□ -0.23
USF2-202ENST00000343550 UNQ9165/PRO28630Q6UXU0 137 aa13.64□□□□□ -0.23
USF2-202ENST00000343550 LYG2Q86SG7 212 aa13.64□□□□□ -0.23
USF2-202ENST00000343550 OR1S1Q8NH92 325 aa13.64□□□□□ -0.23
USF2-202ENST00000343550 HIPK2Q9H2X6 1198 aa13.64□□□□□ -0.23
USF2-202ENST00000343550 GAR1Q9NY12 217 aaKnown RBP13.64□□□□□ -0.23
USF2-202ENST00000343550 TBC1D24Q9ULP9 559 aa13.64□□□□□ -0.23
USF2-202ENST00000343550 CORTO00230 105 aa13.64□□□□□ -0.23
USF2-202ENST00000343550 FOLR2P14207 255 aa13.64□□□□□ -0.23
USF2-202ENST00000343550 EDN2P20800 178 aa13.64□□□□□ -0.23
USF2-202ENST00000343550 C4orf46Q504U0 113 aa13.64□□□□□ -0.23
USF2-202ENST00000343550 C2orf83Q53S99 150 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms