RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 SUB1P53999 127 aaKnown RBP eCLIP9.63□□□□□ -0.87
NECTIN1-203ENST00000341398 UCP3P55916 312 aa9.63□□□□□ -0.87
NECTIN1-203ENST00000341398 PRCDQ00LT1 54 aa9.63□□□□□ -0.87
NECTIN1-203ENST00000341398 LGALS9CQ6DKI2 356 aa9.63□□□□□ -0.87
NECTIN1-203ENST00000341398 TCF24Q7RTU0 167 aa9.63□□□□□ -0.87
NECTIN1-203ENST00000341398 GBGT1Q8N5D6 347 aa9.63□□□□□ -0.87
NECTIN1-203ENST00000341398 GPX8Q8TED1 209 aa9.63□□□□□ -0.87
NECTIN1-203ENST00000341398 TMEM231Q9H6L2 316 aa9.63□□□□□ -0.87
NECTIN1-203ENST00000341398 HERC2O95714 4834 aa9.62□□□□□ -0.87
NECTIN1-203ENST00000341398 IGHV3-49A0A0A0MS15 119 aa9.62□□□□□ -0.87
NECTIN1-203ENST00000341398 DBX1A6NMT0 343 aa9.62□□□□□ -0.87
NECTIN1-203ENST00000341398 ST8SIA3O43173 380 aa9.62□□□□□ -0.87
NECTIN1-203ENST00000341398 SCGB2A1O75556 95 aa9.62□□□□□ -0.87
NECTIN1-203ENST00000341398 DFFBO76075 338 aa9.62□□□□□ -0.87
NECTIN1-203ENST00000341398 APOA1P02647 267 aa9.62□□□□□ -0.87
NECTIN1-203ENST00000341398 RCVRNP35243 200 aa9.62□□□□□ -0.87
NECTIN1-203ENST00000341398 LSM3P62310 102 aaKnown RBP9.62□□□□□ -0.87
NECTIN1-203ENST00000341398 RPL11P62913 178 aaKnown RBP9.62□□□□□ -0.87
NECTIN1-203ENST00000341398 OR11H2Q8NH07 326 aa9.62□□□□□ -0.87
NECTIN1-203ENST00000341398 C11orf45Q8TAV5 145 aa9.62□□□□□ -0.87
NECTIN1-203ENST00000341398 PDCD10Q9BUL8 212 aa9.62□□□□□ -0.87
NECTIN1-203ENST00000341398 COMMD3Q9UBI1 195 aa9.62□□□□□ -0.87
NECTIN1-203ENST00000341398 A0A087WXM4 84 aa9.61□□□□□ -0.87
NECTIN1-203ENST00000341398 A0A1W2PS18 150 aa9.61□□□□□ -0.87
NECTIN1-203ENST00000341398 TGFBR1P36897 503 aa9.61□□□□□ -0.87
NECTIN1-203ENST00000341398 RBMS2Q15434 407 aaKnown RBP9.61□□□□□ -0.87
NECTIN1-203ENST00000341398 FAM90A2PQ658T7 463 aa9.61□□□□□ -0.87
NECTIN1-203ENST00000341398 ZNF600Q6ZNG1 722 aa9.61□□□□□ -0.87
NECTIN1-203ENST00000341398 MRGPRFQ96AM1 343 aa9.61□□□□□ -0.87
NECTIN1-203ENST00000341398 IGHV3OR16-13A0A075B7E8 117 aa9.6□□□□□ -0.87
NECTIN1-203ENST00000341398 IGHV3-74A0A0B4J1X5 117 aa9.6□□□□□ -0.87
NECTIN1-203ENST00000341398 TRAV2A0A0B4J234 112 aa9.6□□□□□ -0.87
NECTIN1-203ENST00000341398 CORTO00230 105 aa9.6□□□□□ -0.87
NECTIN1-203ENST00000341398 CA1P00915 261 aaPredicted RBP9.6□□□□□ -0.87
NECTIN1-203ENST00000341398 IFNA17P01571 189 aa9.6□□□□□ -0.87
NECTIN1-203ENST00000341398 IGHV3-48P01763 117 aa9.6□□□□□ -0.87
NECTIN1-203ENST00000341398 PGAM2P15259 253 aa9.6□□□□□ -0.87
NECTIN1-203ENST00000341398 NPPCP23582 126 aa9.6□□□□□ -0.87
NECTIN1-203ENST00000341398 TCTAP57738 103 aa9.6□□□□□ -0.87
NECTIN1-203ENST00000341398 TMEM187Q14656 261 aa9.6□□□□□ -0.87
NECTIN1-203ENST00000341398 ZNF124Q15973 351 aa9.6□□□□□ -0.87
NECTIN1-203ENST00000341398 TOMM20LQ6UXN7 152 aa9.6□□□□□ -0.87
NECTIN1-203ENST00000341398 SNX29P2Q8IUI4 249 aa9.6□□□□□ -0.87
NECTIN1-203ENST00000341398 CENPSQ8N2Z9 138 aa9.6□□□□□ -0.87
NECTIN1-203ENST00000341398 SLC35G3Q8N808 338 aa9.6□□□□□ -0.87
NECTIN1-203ENST00000341398 YIPF6Q96EC8 236 aa9.6□□□□□ -0.87
NECTIN1-203ENST00000341398 ZNF486Q96H40 463 aaPredicted RBP9.6□□□□□ -0.87
NECTIN1-203ENST00000341398 NARS2Q96I59 477 aaKnown RBP9.6□□□□□ -0.87
NECTIN1-203ENST00000341398 C11orf68Q9H3H3 251 aaKnown RBP9.6□□□□□ -0.87
NECTIN1-203ENST00000341398 ENY2Q9NPA8 101 aa9.6□□□□□ -0.87
NECTIN1-203ENST00000341398 FBXL17Q9UF56 701 aa9.6□□□□□ -0.87
NECTIN1-203ENST00000341398 RYR1P21817 5038 aa9.59□□□□□ -0.87
NECTIN1-203ENST00000341398 IGKV1-39P01597 117 aa9.59□□□□□ -0.87
NECTIN1-203ENST00000341398 IGKV1D-39P04432 117 aa9.59□□□□□ -0.87
NECTIN1-203ENST00000341398 AKR1C2P52895 323 aa9.59□□□□□ -0.87
NECTIN1-203ENST00000341398 STHQ8IWL8 128 aa9.59□□□□□ -0.87
NECTIN1-203ENST00000341398 ST8SIA2Q92186 375 aa9.59□□□□□ -0.87
NECTIN1-203ENST00000341398 MS4A6AQ9H2W1 248 aa9.59□□□□□ -0.87
NECTIN1-203ENST00000341398 VSIRQ9H7M9 311 aa9.59□□□□□ -0.87
NECTIN1-203ENST00000341398 PUS1Q9Y606 427 aaKnown RBP eCLIP9.59□□□□□ -0.87
NECTIN1-203ENST00000341398 INS-IGF2F8WCM5 200 aa9.58□□□□□ -0.88
NECTIN1-203ENST00000341398 TMEM50AO95807 157 aa9.58□□□□□ -0.88
NECTIN1-203ENST00000341398 DEFB131AP59861 70 aa9.58□□□□□ -0.88
NECTIN1-203ENST00000341398 NANOS2P60321 138 aaKnown RBP9.58□□□□□ -0.88
NECTIN1-203ENST00000341398 RND3P61587 244 aa9.58□□□□□ -0.88
NECTIN1-203ENST00000341398 TMEM41BQ5BJD5 291 aa9.58□□□□□ -0.88
NECTIN1-203ENST00000341398 MZT2AQ6P582 158 aa9.58□□□□□ -0.88
NECTIN1-203ENST00000341398 C2CD4CQ8TF44 421 aa9.58□□□□□ -0.88
NECTIN1-203ENST00000341398 RABAC1Q9UI14 185 aa9.58□□□□□ -0.88
NECTIN1-203ENST00000341398 FRAS1Q86XX4 4008 aa9.58□□□□□ -0.88
NECTIN1-203ENST00000341398 FAM25AB3EWG3 89 aa9.57□□□□□ -0.88
NECTIN1-203ENST00000341398 FAM25CB3EWG5 89 aa9.57□□□□□ -0.88
NECTIN1-203ENST00000341398 FAM25GB3EWG6 89 aa9.57□□□□□ -0.88
NECTIN1-203ENST00000341398 TNFAIP8O95379 198 aa9.57□□□□□ -0.88
NECTIN1-203ENST00000341398 EIF2B2P49770 351 aaKnown RBP9.57□□□□□ -0.88
NECTIN1-203ENST00000341398 RORCP51449 518 aa9.57□□□□□ -0.88
NECTIN1-203ENST00000341398 PIGPP57054 158 aa9.57□□□□□ -0.88
NECTIN1-203ENST00000341398 RNASE10Q5GAN6 216 aaKnown RBP9.57□□□□□ -0.88
NECTIN1-203ENST00000341398 RPP25LQ8N5L8 163 aaKnown RBP9.57□□□□□ -0.88
NECTIN1-203ENST00000341398 CCDC71LQ8N9Z2 235 aa9.57□□□□□ -0.88
NECTIN1-203ENST00000341398 ZFAND1Q8TCF1 268 aa9.57□□□□□ -0.88
NECTIN1-203ENST00000341398 TMEM230Q96A57 120 aa9.57□□□□□ -0.88
NECTIN1-203ENST00000341398 RRNAD1Q96FB5 475 aaKnown RBP9.57□□□□□ -0.88
NECTIN1-203ENST00000341398 METTL26Q96S19 204 aa9.57□□□□□ -0.88
NECTIN1-203ENST00000341398 COPZ2Q9P299 210 aa9.57□□□□□ -0.88
NECTIN1-203ENST00000341398 KMT2AQ03164 3969 aa9.57□□□□□ -0.88
NECTIN1-203ENST00000341398 TRAV30A0A087WSZ9 112 aa9.56□□□□□ -0.88
NECTIN1-203ENST00000341398 IGHV3-66A0A0C4DH42 116 aa9.56□□□□□ -0.88
NECTIN1-203ENST00000341398 C3orf85A0A1B0GTC6 90 aa9.56□□□□□ -0.88
NECTIN1-203ENST00000341398 C11orf94C9JXX5 98 aa9.56□□□□□ -0.88
NECTIN1-203ENST00000341398 M0QYG6 137 aa9.56□□□□□ -0.88
NECTIN1-203ENST00000341398 B3GALNT1O75752 331 aa9.56□□□□□ -0.88
NECTIN1-203ENST00000341398 ELK1P19419 428 aa9.56□□□□□ -0.88
NECTIN1-203ENST00000341398 HOXA1P49639 335 aaPredicted RBP9.56□□□□□ -0.88
NECTIN1-203ENST00000341398 TRIM16LQ309B1 348 aa9.56□□□□□ -0.88
NECTIN1-203ENST00000341398 SPINK9Q5DT21 86 aa9.56□□□□□ -0.88
NECTIN1-203ENST00000341398 LEMD1Q68G75 181 aa9.56□□□□□ -0.88
NECTIN1-203ENST00000341398 ARRDC1Q8N5I2 433 aa9.56□□□□□ -0.88
NECTIN1-203ENST00000341398 RNASE11Q8TAA1 199 aaKnown RBP9.56□□□□□ -0.88
NECTIN1-203ENST00000341398 C15orf40Q8WUR7 153 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms