RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 NAV1Q8NEY1 1877 aa3.42□□□□□ -1.86
NEDD4-201ENST00000338963 STRCP1A6NGW2 1772 aa3.42□□□□□ -1.86
NEDD4-201ENST00000338963 A0A0G2JMZ2 1700 aa3.42□□□□□ -1.86
NEDD4-201ENST00000338963 LRRC37A2A6NM11 1700 aa3.42□□□□□ -1.86
NEDD4-201ENST00000338963 LRRC37AA6NMS7 1700 aa3.42□□□□□ -1.86
NEDD4-201ENST00000338963 NPIPB6E9PJ23 425 aa3.42□□□□□ -1.86
NEDD4-201ENST00000338963 HSPB6O14558 160 aa3.42□□□□□ -1.86
NEDD4-201ENST00000338963 AGFG2O95081 481 aa3.42□□□□□ -1.86
NEDD4-201ENST00000338963 ARTNQ5T4W7 220 aa3.42□□□□□ -1.86
NEDD4-201ENST00000338963 FHL5Q5TD97 284 aa3.42□□□□□ -1.86
NEDD4-201ENST00000338963 ODF3L1Q8IXM7 274 aa3.42□□□□□ -1.86
NEDD4-201ENST00000338963 KIR3DL3Q8N743 410 aa3.42□□□□□ -1.86
NEDD4-201ENST00000338963 EPDR1Q9UM22 224 aa3.42□□□□□ -1.86
NEDD4-201ENST00000338963 APOHP02749 345 aaPredicted RBP3.42□□□□□ -1.86
NEDD4-201ENST00000338963 LINC00694P0DN24 101 aa3.42□□□□□ -1.86
NEDD4-201ENST00000338963 EMDP50402 254 aa3.42□□□□□ -1.86
NEDD4-201ENST00000338963 CST6Q15828 149 aa3.42□□□□□ -1.86
NEDD4-201ENST00000338963 SBSPONQ8IVN8 264 aa3.42□□□□□ -1.86
NEDD4-201ENST00000338963 DRAM1Q8N682 238 aa3.42□□□□□ -1.86
NEDD4-201ENST00000338963 SLX4Q8IY92 1834 aa3.42□□□□□ -1.86
NEDD4-201ENST00000338963 CDK5RAP2Q96SN8 1893 aa3.42□□□□□ -1.86
NEDD4-201ENST00000338963 ENSAO43768 121 aaKnown RBP3.42□□□□□ -1.86
NEDD4-201ENST00000338963 SPINK4O60575 86 aa3.42□□□□□ -1.86
NEDD4-201ENST00000338963 PSMB2P49721 201 aa3.42□□□□□ -1.86
NEDD4-201ENST00000338963 TM4SF19Q96DZ7 209 aa3.42□□□□□ -1.86
NEDD4-201ENST00000338963 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.42□□□□□ -1.86
NEDD4-201ENST00000338963 CHD4Q14839 1912 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 IGKV1D-42A0A075B6H8 117 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 TRBV6-6A0A0A6YYG2 114 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 LINC01549A6NIU2 74 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 CRLF1O75462 422 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 IGHG1P01857 330 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 PRNPP04156 253 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 ARL14EPLP0DKL9 152 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 CRYGAP11844 174 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 GATD1Q8NB37 220 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 GATAD1Q8WUU5 269 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 CCL28Q9NRJ3 127 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 ALKBH4Q9NXW9 302 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 A0A1W2PQD3 144 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 IGKV1D-33P01593 117 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 IGKV1-33P01594 117 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 IGKCP01834 107 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 FAM120AOSQ5T036 256 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 ZNF793Q6ZN11 406 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 TMEFF1Q8IYR6 380 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 FAM57AQ8TBR7 257 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 PHLDA1Q8WV24 401 aaPredicted RBP3.41□□□□□ -1.86
NEDD4-201ENST00000338963 DDB2Q92466 427 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 C1orf43Q9BWL3 253 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 MRPL20Q9BYC9 149 aaKnown RBP3.41□□□□□ -1.86
NEDD4-201ENST00000338963 WNT6Q9Y6F9 365 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 LOC102723996A0A087X1L8 192 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 A0A1W2PPV9 198 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 EDDM3BP56851 147 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 HERVK_113P61574 105 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 ATXN8Q156A1 80 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 ZNF542PQ5EBM4 170 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 ZNF818PQ6ZRF7 136 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 OR8A1Q8NGG7 326 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 MAFAQ8NHW3 353 aaPredicted RBP3.41□□□□□ -1.86
NEDD4-201ENST00000338963 DYNLRB1Q9NP97 96 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 HAX1O00165 279 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 TIMM23O14925 209 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 FKBP2P26885 142 aaKnown RBP3.41□□□□□ -1.86
NEDD4-201ENST00000338963 ZNF114Q8NC26 417 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 RASL10AQ92737 203 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 RTL8AQ9BWD3 113 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 AAMDCQ9H7C9 122 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 A0A1B0GXF2 115 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 M0R2P5 195 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 COX6CP09669 75 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 LILRA6Q6PI73 481 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 Q6ZVL8 140 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 MKXQ8IYA7 352 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 ANKRD29Q8N6D5 301 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 PATJQ8NI35 1801 aa3.41□□□□□ -1.86
NEDD4-201ENST00000338963 ZNF840PA6NDX5 716 aa3.4□□□□□ -1.86
NEDD4-201ENST00000338963 K7EN84 100 aa3.4□□□□□ -1.86
NEDD4-201ENST00000338963 ACTL6BO94805 426 aa3.4□□□□□ -1.86
NEDD4-201ENST00000338963 CTLA4P16410 223 aa3.4□□□□□ -1.86
NEDD4-201ENST00000338963 CD27P26842 260 aa3.4□□□□□ -1.86
NEDD4-201ENST00000338963 FCER1GP30273 86 aa3.4□□□□□ -1.86
NEDD4-201ENST00000338963 ERVK-16P61578 105 aa3.4□□□□□ -1.86
NEDD4-201ENST00000338963 TRIP6Q15654 476 aaKnown RBP3.4□□□□□ -1.86
NEDD4-201ENST00000338963 C1orf195Q5TG92 126 aa3.4□□□□□ -1.86
NEDD4-201ENST00000338963 TMUB1Q9BVT8 246 aa3.4□□□□□ -1.86
NEDD4-201ENST00000338963 EDA2RQ9HAV5 297 aa3.4□□□□□ -1.86
NEDD4-201ENST00000338963 COX7CP15954 63 aa3.4□□□□□ -1.86
NEDD4-201ENST00000338963 CACNG7P62955 275 aa3.4□□□□□ -1.86
NEDD4-201ENST00000338963 PAPPA-AS1Q5QFB9 102 aa3.4□□□□□ -1.86
NEDD4-201ENST00000338963 MYOZ3Q8TDC0 251 aa3.4□□□□□ -1.86
NEDD4-201ENST00000338963 HDHD3Q9BSH5 251 aaPredicted RBP3.4□□□□□ -1.86
NEDD4-201ENST00000338963 TCF19Q9Y242 345 aa3.4□□□□□ -1.86
NEDD4-201ENST00000338963 F11RQ9Y624 299 aaKnown RBP3.4□□□□□ -1.86
NEDD4-201ENST00000338963 LOC107984156A0A0G2JMH3 177 aa3.4□□□□□ -1.86
NEDD4-201ENST00000338963 FEZF1A0PJY2 475 aa3.4□□□□□ -1.86
NEDD4-201ENST00000338963 J3QLI3 93 aa3.4□□□□□ -1.86
NEDD4-201ENST00000338963 CLDN14O95500 239 aa3.4□□□□□ -1.86
NEDD4-201ENST00000338963 SUB1P53999 127 aaKnown RBP eCLIP3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms