RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Tmem126bQ9D1R1 230 aa10.2□□□□□ -0.78
Ndc1-204ENSMUST00000139560 4930447A16RikQ9D5F6 132 aa10.2□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Gm4788E9Q8B5 879 aa10.2□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Gm20821J3QPJ2 227 aa10.2□□□□□ -0.78
Ndc1-204ENSMUST00000139560 ApcsP12246 224 aa10.2□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Scand1Q2M4I6 142 aa10.2□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Smim9Q3V0X1 137 aa10.2□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Tnfrsf8Q60846 498 aa10.2□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Phf13Q8K2W6 296 aa10.2□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Cela1Q91X79 266 aa10.2□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Myo5aQ99104 1853 aaKnown RBP10.2□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Olfr1191-ps1A0A1L1STD5 311 aa10.2□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Zfp334A2A4U6 679 aa10.2□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Olfr204E9Q8M0 305 aa10.2□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Tnfsf12O54907 249 aa10.2□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Rims4P60191 269 aa10.2□□□□□ -0.78
Ndc1-204ENSMUST00000139560 ElobP62869 118 aa10.2□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Tmem108Q8BHE4 574 aa10.2□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Barx1Q9ER42 254 aa10.2□□□□□ -0.78
Ndc1-204ENSMUST00000139560 NgbQ9ER97 151 aa10.2□□□□□ -0.78
Ndc1-204ENSMUST00000139560 HcstQ9QUJ0 79 aa10.2□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Ighv6-4A0A0A6YX19 119 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Trav12-2A0N8N6 114 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Gm21788J3QNH3 180 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Gm20877J3QPZ4 227 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Ifna4P07351 186 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Pcbp4P57724 403 aaKnown RBP10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Hoxc4Q08624 264 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Psg19Q4KL31 475 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 AfmidQ8K4H1 305 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Ly6aP05533 134 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 P2ry1P49650 373 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Tcl1b1P56840 116 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Gng3P63216 75 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Gcm1P70348 436 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Hoxc12Q8K5B8 280 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Syngr3Q8R191 229 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Zfp959Q91VM8 539 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Asb5Q9D1A4 329 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Rbfox1Q9JJ43 396 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Olfr1248A0A1L1SSZ5 307 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 A630073D07RikE9PWS6 100 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Rac1P63001 192 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 BC147527Q3V185 167 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Gm21943Q5FWD5 227 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 PnlipQ6P8U6 465 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Cacfd1Q8BG21 171 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Tmem127Q8BGP5 238 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Nudt9Q8BVU5 350 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Xrcc3Q9CXE6 349 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 TecrQ9CY27 308 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Q9DAN9 164 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Zfp646Q6NV66 1788 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Gm14597A2CFG5 200 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Rpp30O88796 268 aaKnown RBP10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Cd74P04441 279 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Slc45a2P58355 530 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Rnd3P61588 244 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Lhfpl2Q8BGA2 222 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 AtcayQ8BHE3 372 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Coro2aQ8C0P5 524 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Q8VCE4 163 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Olfr1454Q8VFW2 307 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Foxj2Q9ES18 565 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Defb3Q9WTL0 63 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Tmem196V9GX04 182 aa10.19□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Ankrd60A2AMD2 318 aa10.18□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Nxpe5E0CX47 564 aa10.18□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Gm10097J3KMK7 105 aa10.18□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Gfra3O35118 397 aa10.18□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Wisp1O54775 367 aa10.18□□□□□ -0.78
Ndc1-204ENSMUST00000139560 P01629 112 aa10.18□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Rtl6Q505G4 243 aa10.18□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Tctex1d2Q9CQ66 144 aa10.18□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Tmem50bQ9D1X9 158 aa10.18□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Mad2l1bpQ9DCX1 276 aa10.18□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Prss22Q9ER10 306 aa10.18□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Kcnip2Q9JJ69 270 aa10.18□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Try5Q9QUK9 246 aa10.18□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Tnfsf14Q9QYH9 239 aa10.18□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Nubp1Q9R060 320 aa10.18□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Try4Q9R0T7 246 aa10.18□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Ttc6G3UYY4 1857 aa10.18□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Scgb1b15A0A087WP50 93 aa10.18□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Igkv6-20A0A140T8P2 115 aa10.18□□□□□ -0.78
Ndc1-204ENSMUST00000139560 CymB7ZWD6 379 aa10.18□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Khdc1bP0C7A0 126 aa10.18□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Gnb4P29387 340 aa10.18□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Oprk1P33534 380 aa10.18□□□□□ -0.78
Ndc1-204ENSMUST00000139560 IdnkQ8R0J8 184 aa10.18□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Olfr1448Q8VFX1 314 aa10.18□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Dppa2Q9CWH0 301 aa10.18□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Igkv10-95A0A0G2JFY3 115 aa10.18□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Gm44596A0A0N4SVA0 210 aa10.18□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Cldn34c4A2ANA3 212 aa10.18□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Olfr556E9Q549 324 aa10.18□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Gm6665F6Y363 85 aa10.18□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Fam160a2Q3U2I3 975 aa10.18□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Rab35Q6PHN9 201 aa10.18□□□□□ -0.78
Ndc1-204ENSMUST00000139560 Olfr876Q7TRE4 310 aa10.18□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 36.3 ms