RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 SPATA12Q7Z6I5 190 aa12.93□□□□□ -0.34
CLN6-212ENST00000636020 GDPD1Q8N9F7 314 aa12.93□□□□□ -0.34
CLN6-212ENST00000636020 OR10W1Q8NGF6 305 aa12.93□□□□□ -0.34
CLN6-212ENST00000636020 TCTEX1D2Q8WW35 142 aa12.93□□□□□ -0.34
CLN6-212ENST00000636020 HSD17B10Q99714 261 aaKnown RBP12.93□□□□□ -0.34
CLN6-212ENST00000636020 TRAV14DV4A0A0A6YYC5 116 aa12.92□□□□□ -0.34
CLN6-212ENST00000636020 TRAV2A0A0B4J234 112 aa12.92□□□□□ -0.34
CLN6-212ENST00000636020 DNASE2O00115 360 aaPredicted RBP12.92□□□□□ -0.34
CLN6-212ENST00000636020 NUPL2O15504 423 aaKnown RBP12.92□□□□□ -0.34
CLN6-212ENST00000636020 HLA-DQB1P01920 261 aa12.92□□□□□ -0.34
CLN6-212ENST00000636020 PSMB9P28065 219 aa12.92□□□□□ -0.34
CLN6-212ENST00000636020 TIMM50Q3ZCQ8 353 aa12.92□□□□□ -0.34
CLN6-212ENST00000636020 C6orf223Q8N319 242 aa12.92□□□□□ -0.34
CLN6-212ENST00000636020 UBAC2Q8NBM4 344 aa12.92□□□□□ -0.34
CLN6-212ENST00000636020 MGLLQ99685 303 aa12.92□□□□□ -0.34
CLN6-212ENST00000636020 RBM38Q9H0Z9 239 aaKnown RBP12.92□□□□□ -0.34
CLN6-212ENST00000636020 FLG2Q5D862 2391 aaPredicted RBP12.92□□□□□ -0.34
CLN6-212ENST00000636020 IGKV1D-8A0A087WSZ0 117 aa12.91□□□□□ -0.34
CLN6-212ENST00000636020 SLC22A5O76082 557 aa12.91□□□□□ -0.34
CLN6-212ENST00000636020 SERPINE2P07093 398 aa12.91□□□□□ -0.34
CLN6-212ENST00000636020 MLLT11Q13015 90 aaPredicted RBP12.91□□□□□ -0.34
CLN6-212ENST00000636020 GPR141Q7Z602 305 aa12.91□□□□□ -0.34
CLN6-212ENST00000636020 MFSD4AQ8N468 514 aa12.91□□□□□ -0.34
CLN6-212ENST00000636020 YIPF6Q96EC8 236 aa12.91□□□□□ -0.34
CLN6-212ENST00000636020 CENPOQ9BU64 300 aa12.91□□□□□ -0.34
CLN6-212ENST00000636020 RNF167Q9H6Y7 350 aa12.91□□□□□ -0.34
CLN6-212ENST00000636020 HRASLSQ9HDD0 168 aa12.91□□□□□ -0.34
CLN6-212ENST00000636020 SPATA2Q9UM82 520 aa12.91□□□□□ -0.34
CLN6-212ENST00000636020 OR2W1Q9Y3N9 320 aa12.91□□□□□ -0.34
CLN6-212ENST00000636020 TRAV3A0A0B4J244 114 aa12.9□□□□□ -0.34
CLN6-212ENST00000636020 K7EIM0 57 aa12.9□□□□□ -0.34
CLN6-212ENST00000636020 SLC17A2O00624 439 aa12.9□□□□□ -0.34
CLN6-212ENST00000636020 YIF1AO95070 293 aa12.9□□□□□ -0.34
CLN6-212ENST00000636020 RELQ04864 619 aaPredicted RBP12.9□□□□□ -0.34
CLN6-212ENST00000636020 Q56UQ5 140 aa12.9□□□□□ -0.34
CLN6-212ENST00000636020 Q6ZS49 121 aa12.9□□□□□ -0.34
CLN6-212ENST00000636020 LILRB2Q8N423 598 aa12.9□□□□□ -0.34
CLN6-212ENST00000636020 RAB3CQ96E17 227 aa12.9□□□□□ -0.34
CLN6-212ENST00000636020 GFI1Q99684 422 aa12.9□□□□□ -0.34
CLN6-212ENST00000636020 QTRT1Q9BXR0 403 aaKnown RBP12.9□□□□□ -0.34
CLN6-212ENST00000636020 COMMD5Q9GZQ3 224 aa12.9□□□□□ -0.34
CLN6-212ENST00000636020 IGKV1D-13A0A0B4J2D9 117 aa12.89□□□□□ -0.35
CLN6-212ENST00000636020 KNCNA6PVL3 124 aa12.89□□□□□ -0.35
CLN6-212ENST00000636020 OR13C7P0DN81 318 aa12.89□□□□□ -0.35
CLN6-212ENST00000636020 IGKV1-13P0DP09 117 aa12.89□□□□□ -0.35
CLN6-212ENST00000636020 FAM3BP58499 235 aaPredicted RBP12.89□□□□□ -0.35
CLN6-212ENST00000636020 WT1-ASQ06250 92 aa12.89□□□□□ -0.35
CLN6-212ENST00000636020 HSD17B12Q53GQ0 312 aa12.89□□□□□ -0.35
CLN6-212ENST00000636020 DUSP18Q8NEJ0 188 aa12.89□□□□□ -0.35
CLN6-212ENST00000636020 ST8SIA2Q92186 375 aa12.89□□□□□ -0.35
CLN6-212ENST00000636020 VSIRQ9H7M9 311 aa12.89□□□□□ -0.35
CLN6-212ENST00000636020 PLGRKTQ9HBL7 147 aa12.89□□□□□ -0.35
CLN6-212ENST00000636020 NBDYA0A0U1RRE5 68 aa12.88□□□□□ -0.35
CLN6-212ENST00000636020 SMIM31A0A1B0GVY4 71 aa12.88□□□□□ -0.35
CLN6-212ENST00000636020 UPK2O00526 184 aa12.88□□□□□ -0.35
CLN6-212ENST00000636020 HSMCR30P0CW71 290 aa12.88□□□□□ -0.35
CLN6-212ENST00000636020 NFYAP23511 347 aaPredicted RBP12.88□□□□□ -0.35
CLN6-212ENST00000636020 ZNF66Q6ZN08 573 aa12.88□□□□□ -0.35
CLN6-212ENST00000636020 MS4A15Q8N5U1 240 aa12.88□□□□□ -0.35
CLN6-212ENST00000636020 GPHA2Q96T91 129 aa12.88□□□□□ -0.35
CLN6-212ENST00000636020 AIFM2Q9BRQ8 373 aa12.88□□□□□ -0.35
CLN6-212ENST00000636020 TAS2R8Q9NYW2 309 aa12.88□□□□□ -0.35
CLN6-212ENST00000636020 NDUFA13Q9P0J0 144 aa12.88□□□□□ -0.35
CLN6-212ENST00000636020 F11RQ9Y624 299 aaKnown RBP12.88□□□□□ -0.35
CLN6-212ENST00000636020 ST8SIA3O43173 380 aa12.87□□□□□ -0.35
CLN6-212ENST00000636020 APOHP02749 345 aaPredicted RBP12.87□□□□□ -0.35
CLN6-212ENST00000636020 SPART-AS1P0CW21 52 aa12.87□□□□□ -0.35
CLN6-212ENST00000636020 C2orf76Q3KRA6 126 aa12.87□□□□□ -0.35
CLN6-212ENST00000636020 FUNDC2Q9BWH2 189 aa12.87□□□□□ -0.35
CLN6-212ENST00000636020 NAA50Q9GZZ1 169 aaKnown RBP12.87□□□□□ -0.35
CLN6-212ENST00000636020 NDUFB11Q9NX14 153 aa12.87□□□□□ -0.35
CLN6-212ENST00000636020 HMCN2Q8NDA2 5059 aa12.87□□□□□ -0.35
CLN6-212ENST00000636020 MFNGO00587 321 aa12.86□□□□□ -0.35
CLN6-212ENST00000636020 UCHL1P09936 223 aa12.86□□□□□ -0.35
CLN6-212ENST00000636020 TRAPPC2P0DI81 140 aa12.86□□□□□ -0.35
CLN6-212ENST00000636020 TRAPPC2BP0DI82 140 aa12.86□□□□□ -0.35
CLN6-212ENST00000636020 GNB3P16520 340 aa12.86□□□□□ -0.35
CLN6-212ENST00000636020 CLDN12P56749 244 aa12.86□□□□□ -0.35
CLN6-212ENST00000636020 KRTAP10-2P60368 255 aa12.86□□□□□ -0.35
CLN6-212ENST00000636020 RPL11P62913 178 aaKnown RBP12.86□□□□□ -0.35
CLN6-212ENST00000636020 RAB11BQ15907 218 aa12.86□□□□□ -0.35
CLN6-212ENST00000636020 GPR107Q5VW38 600 aa12.86□□□□□ -0.35
CLN6-212ENST00000636020 THOC7Q6I9Y2 204 aaKnown RBP12.86□□□□□ -0.35
CLN6-212ENST00000636020 HSD17B13Q7Z5P4 300 aaPredicted RBP12.86□□□□□ -0.35
CLN6-212ENST00000636020 CLVS1Q8IUQ0 354 aaPredicted RBP12.86□□□□□ -0.35
CLN6-212ENST00000636020 UFD1Q92890 307 aa12.86□□□□□ -0.35
CLN6-212ENST00000636020 FAM3DQ96BQ1 224 aa12.86□□□□□ -0.35
CLN6-212ENST00000636020 RABAC1Q9UI14 185 aa12.86□□□□□ -0.35
CLN6-212ENST00000636020 GABARAPO95166 117 aa12.85□□□□□ -0.35
CLN6-212ENST00000636020 EIF4EP06730 217 aaKnown RBP12.85□□□□□ -0.35
CLN6-212ENST00000636020 FGF2P09038 288 aa12.85□□□□□ -0.35
CLN6-212ENST00000636020 POU2AF1Q16633 256 aa12.85□□□□□ -0.35
CLN6-212ENST00000636020 ACTL10Q5JWF8 245 aa12.85□□□□□ -0.35
CLN6-212ENST00000636020 GRAMD2BQ96HH9 432 aa12.85□□□□□ -0.35
CLN6-212ENST00000636020 NXF2Q9GZY0 626 aaKnown RBP12.85□□□□□ -0.35
CLN6-212ENST00000636020 TMED3Q9Y3Q3 217 aa12.85□□□□□ -0.35
CLN6-212ENST00000636020 IGHV3-66A0A0C4DH42 116 aa12.84□□□□□ -0.35
CLN6-212ENST00000636020 TEX50A0A1B0GTY4 177 aa12.84□□□□□ -0.35
CLN6-212ENST00000636020 K7EQG2 157 aa12.84□□□□□ -0.35
CLN6-212ENST00000636020 GADD45AP24522 165 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms