RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 SNRNP70P08621 437 aaKnown RBP13.95□□□□□ -0.18
PCDHGC3-205ENST00000617641 CHRNA7P36544 502 aa13.95□□□□□ -0.18
PCDHGC3-205ENST00000617641 MLANAQ16655 118 aa13.95□□□□□ -0.18
PCDHGC3-205ENST00000617641 HCP5Q6MZN7 132 aa13.95□□□□□ -0.18
PCDHGC3-205ENST00000617641 TEX45Q8NA69 505 aa13.95□□□□□ -0.18
PCDHGC3-205ENST00000617641 OR11H6Q8NGC7 330 aa13.95□□□□□ -0.18
PCDHGC3-205ENST00000617641 IGFBPL1Q8WX77 278 aa13.95□□□□□ -0.18
PCDHGC3-205ENST00000617641 AKAP6Q13023 2319 aa13.94□□□□□ -0.18
PCDHGC3-205ENST00000617641 COL12A1Q99715 3063 aa13.94□□□□□ -0.18
PCDHGC3-205ENST00000617641 A0A1W2PRD5 423 aa13.94□□□□□ -0.18
PCDHGC3-205ENST00000617641 A0A1W2PRF3 423 aa13.94□□□□□ -0.18
PCDHGC3-205ENST00000617641 A0A1W2PRM7 423 aa13.94□□□□□ -0.18
PCDHGC3-205ENST00000617641 IGHV2-5P01817 119 aa13.94□□□□□ -0.18
PCDHGC3-205ENST00000617641 PRTN3P24158 256 aa13.94□□□□□ -0.18
PCDHGC3-205ENST00000617641 HTR1DP28221 377 aa13.94□□□□□ -0.18
PCDHGC3-205ENST00000617641 ATP5IP56385 69 aaPredicted RBP13.94□□□□□ -0.18
PCDHGC3-205ENST00000617641 PSG5Q15238 335 aa13.94□□□□□ -0.18
PCDHGC3-205ENST00000617641 TPTE2P1Q5T6R2 138 aa13.94□□□□□ -0.18
PCDHGC3-205ENST00000617641 RPS10P5Q9NQ39 176 aa13.94□□□□□ -0.18
PCDHGC3-205ENST00000617641 ASH1LQ9NR48 2969 aaKnown RBP13.94□□□□□ -0.18
PCDHGC3-205ENST00000617641 SEC14L6B5MCN3 397 aa13.93□□□□□ -0.18
PCDHGC3-205ENST00000617641 INS-IGF2F8WCM5 200 aa13.93□□□□□ -0.18
PCDHGC3-205ENST00000617641 OVOL3O00110 214 aa13.93□□□□□ -0.18
PCDHGC3-205ENST00000617641 TIMM23O14925 209 aa13.93□□□□□ -0.18
PCDHGC3-205ENST00000617641 IFNA1P01562 189 aa13.93□□□□□ -0.18
PCDHGC3-205ENST00000617641 CRYGBP07316 175 aa13.93□□□□□ -0.18
PCDHGC3-205ENST00000617641 PAX6P26367 422 aa13.93□□□□□ -0.18
PCDHGC3-205ENST00000617641 UNKLQ9H9P5 680 aaKnown RBP13.93□□□□□ -0.18
PCDHGC3-205ENST00000617641 VAX2Q9UIW0 290 aa13.93□□□□□ -0.18
PCDHGC3-205ENST00000617641 HILPDAQ9Y5L2 63 aa13.93□□□□□ -0.18
PCDHGC3-205ENST00000617641 PLXNB1O43157 2135 aa13.93□□□□□ -0.18
PCDHGC3-205ENST00000617641 C7orf77A4D0Y5 90 aa13.93□□□□□ -0.18
PCDHGC3-205ENST00000617641 FNDC10F2Z333 226 aa13.93□□□□□ -0.18
PCDHGC3-205ENST00000617641 LCN2P80188 198 aa13.93□□□□□ -0.18
PCDHGC3-205ENST00000617641 PRSS8Q16651 343 aa13.93□□□□□ -0.18
PCDHGC3-205ENST00000617641 LHFPL4Q7Z7J7 247 aa13.93□□□□□ -0.18
PCDHGC3-205ENST00000617641 GATAD1Q8WUU5 269 aa13.93□□□□□ -0.18
PCDHGC3-205ENST00000617641 BPESC1Q9GZL8 116 aa13.93□□□□□ -0.18
PCDHGC3-205ENST00000617641 DPM3Q9P2X0 92 aa13.93□□□□□ -0.18
PCDHGC3-205ENST00000617641 SIGLEC9Q9Y336 463 aa13.93□□□□□ -0.18
PCDHGC3-205ENST00000617641 REG1AP05451 166 aa13.92□□□□□ -0.18
PCDHGC3-205ENST00000617641 GAMTQ14353 236 aa13.92□□□□□ -0.18
PCDHGC3-205ENST00000617641 TNXAQ16473 311 aa13.92□□□□□ -0.18
PCDHGC3-205ENST00000617641 STPG3Q8N7X2 389 aa13.92□□□□□ -0.18
PCDHGC3-205ENST00000617641 METTL1Q9UBP6 276 aaKnown RBP13.92□□□□□ -0.18
PCDHGC3-205ENST00000617641 ODF3BA8MYP8 253 aa13.92□□□□□ -0.18
PCDHGC3-205ENST00000617641 H3BQ15 152 aa13.92□□□□□ -0.18
PCDHGC3-205ENST00000617641 SOX15O60248 233 aa13.92□□□□□ -0.18
PCDHGC3-205ENST00000617641 RAB31Q13636 194 aa13.92□□□□□ -0.18
PCDHGC3-205ENST00000617641 PMS2P11Q13670 270 aa13.92□□□□□ -0.18
PCDHGC3-205ENST00000617641 RBMS3Q6XE24 437 aaKnown RBP13.92□□□□□ -0.18
PCDHGC3-205ENST00000617641 VMO1Q7Z5L0 202 aa13.92□□□□□ -0.18
PCDHGC3-205ENST00000617641 MMD2Q8IY49 270 aa13.92□□□□□ -0.18
PCDHGC3-205ENST00000617641 BBC3Q96PG8 261 aaPredicted RBP13.92□□□□□ -0.18
PCDHGC3-205ENST00000617641 IGKV1OR2-108A0A075B7D4 117 aa13.91□□□□□ -0.18
PCDHGC3-205ENST00000617641 A0A1W2PPV4 95 aa13.91□□□□□ -0.18
PCDHGC3-205ENST00000617641 CD69Q07108 199 aa13.91□□□□□ -0.18
PCDHGC3-205ENST00000617641 TMEM144Q7Z5S9 345 aa13.91□□□□□ -0.18
PCDHGC3-205ENST00000617641 P2RX4Q99571 388 aa13.91□□□□□ -0.18
PCDHGC3-205ENST00000617641 SPOCK3Q9BQ16 436 aa13.91□□□□□ -0.18
PCDHGC3-205ENST00000617641 FBXL15Q9H469 300 aa13.91□□□□□ -0.18
PCDHGC3-205ENST00000617641 KCNIP2Q9NS61 270 aa13.91□□□□□ -0.18
PCDHGC3-205ENST00000617641 NAV3Q8IVL0 2385 aa13.91□□□□□ -0.18
PCDHGC3-205ENST00000617641 SPTAN1Q13813 2472 aaKnown RBP13.91□□□□□ -0.18
PCDHGC3-205ENST00000617641 GNB1P62873 340 aa13.91□□□□□ -0.18
PCDHGC3-205ENST00000617641 FAM90A2PQ658T7 463 aa13.91□□□□□ -0.18
PCDHGC3-205ENST00000617641 KIR3DL3Q8N743 410 aa13.91□□□□□ -0.18
PCDHGC3-205ENST00000617641 FLNCQ14315 2725 aa13.9□□□□□ -0.18
PCDHGC3-205ENST00000617641 ACTL6BO94805 426 aa13.9□□□□□ -0.18
PCDHGC3-205ENST00000617641 VENTXO95231 258 aa13.9□□□□□ -0.18
PCDHGC3-205ENST00000617641 IGHV4-39P01824 125 aa13.9□□□□□ -0.18
PCDHGC3-205ENST00000617641 APELAP0DMC3 54 aa13.9□□□□□ -0.18
PCDHGC3-205ENST00000617641 RPL27AP46776 148 aaKnown RBP13.9□□□□□ -0.18
PCDHGC3-205ENST00000617641 RPL29P47914 159 aaKnown RBP13.9□□□□□ -0.18
PCDHGC3-205ENST00000617641 SLC16A13Q7RTY0 426 aa13.9□□□□□ -0.18
PCDHGC3-205ENST00000617641 IGLC7A0M8Q6 106 aa13.9□□□□□ -0.18
PCDHGC3-205ENST00000617641 PSMB3P49720 205 aa13.9□□□□□ -0.18
PCDHGC3-205ENST00000617641 CD81P60033 236 aa13.9□□□□□ -0.18
PCDHGC3-205ENST00000617641 PRR20EP86478 221 aa13.9□□□□□ -0.18
PCDHGC3-205ENST00000617641 PRR20CP86479 221 aa13.9□□□□□ -0.18
PCDHGC3-205ENST00000617641 PRR20DP86480 221 aa13.9□□□□□ -0.18
PCDHGC3-205ENST00000617641 PRR20BP86481 221 aa13.9□□□□□ -0.18
PCDHGC3-205ENST00000617641 PRR20AP86496 221 aa13.9□□□□□ -0.18
PCDHGC3-205ENST00000617641 C1orf122Q6ZSJ8 110 aa13.9□□□□□ -0.18
PCDHGC3-205ENST00000617641 SLC35E3Q7Z769 313 aa13.9□□□□□ -0.18
PCDHGC3-205ENST00000617641 PPP1R27Q86WC6 154 aa13.9□□□□□ -0.18
PCDHGC3-205ENST00000617641 OR2T6Q8NHC8 308 aa13.9□□□□□ -0.18
PCDHGC3-205ENST00000617641 SMCO4Q9NRQ5 59 aa13.9□□□□□ -0.18
PCDHGC3-205ENST00000617641 LINC00869P0C866 280 aa13.89□□□□□ -0.19
PCDHGC3-205ENST00000617641 HOXB4P17483 251 aaPredicted RBP13.89□□□□□ -0.19
PCDHGC3-205ENST00000617641 CEACAM3P40198 252 aa13.89□□□□□ -0.19
PCDHGC3-205ENST00000617641 LMO4P61968 165 aa13.89□□□□□ -0.19
PCDHGC3-205ENST00000617641 MEF2BQ02080 365 aaPredicted RBP13.89□□□□□ -0.19
PCDHGC3-205ENST00000617641 PAX2Q02962 417 aa13.89□□□□□ -0.19
PCDHGC3-205ENST00000617641 ABHD5Q8WTS1 349 aa13.89□□□□□ -0.19
PCDHGC3-205ENST00000617641 CFHR4Q92496 578 aa13.89□□□□□ -0.19
PCDHGC3-205ENST00000617641 ACY3Q96HD9 319 aa13.89□□□□□ -0.19
PCDHGC3-205ENST00000617641 FNDC4Q9H6D8 234 aaPredicted RBP13.89□□□□□ -0.19
PCDHGC3-205ENST00000617641 MANBALQ9NQG1 85 aa13.89□□□□□ -0.19
PCDHGC3-205ENST00000617641 SLC45A2Q9UMX9 530 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms