RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 SSX2Q16385 188 aa16.34■□□□□ 0.21
ATG4D-204ENST00000586417 CENPVQ7Z7K6 275 aaPredicted RBP16.34■□□□□ 0.21
ATG4D-204ENST00000586417 AJUBAQ96IF1 538 aa16.34■□□□□ 0.21
ATG4D-204ENST00000586417 TBL2Q9Y4P3 447 aaKnown RBP16.34■□□□□ 0.21
ATG4D-204ENST00000586417 SONP18583 2426 aaKnown RBP16.34■□□□□ 0.21
ATG4D-204ENST00000586417 ZFHX3Q15911 3703 aa16.34■□□□□ 0.21
ATG4D-204ENST00000586417 MAST4O15021 2626 aa16.34■□□□□ 0.21
ATG4D-204ENST00000586417 RAB19A4D1S5 217 aa16.33■□□□□ 0.21
ATG4D-204ENST00000586417 NUDT19A8MXV4 375 aa16.33■□□□□ 0.21
ATG4D-204ENST00000586417 IFNA4P05014 189 aa16.33■□□□□ 0.21
ATG4D-204ENST00000586417 DLK1P80370 383 aa16.33■□□□□ 0.21
ATG4D-204ENST00000586417 FBLN7Q53RD9 439 aa16.33■□□□□ 0.21
ATG4D-204ENST00000586417 SPNS3Q6ZMD2 512 aa16.33■□□□□ 0.21
ATG4D-204ENST00000586417 IL34Q6ZMJ4 242 aa16.33■□□□□ 0.21
ATG4D-204ENST00000586417 MMD2Q8IY49 270 aa16.33■□□□□ 0.21
ATG4D-204ENST00000586417 FAM213BQ8TBF2 198 aa16.33■□□□□ 0.21
ATG4D-204ENST00000586417 SMR3AQ99954 134 aa16.33■□□□□ 0.21
ATG4D-204ENST00000586417 METTL1Q9UBP6 276 aaKnown RBP16.33■□□□□ 0.21
ATG4D-204ENST00000586417 TIMM9Q9Y5J7 89 aa16.33■□□□□ 0.21
ATG4D-204ENST00000586417 RNASE2P10153 161 aaKnown RBP16.33■□□□□ 0.2
ATG4D-204ENST00000586417 GATA3P23771 443 aa16.33■□□□□ 0.2
ATG4D-204ENST00000586417 LGALS4P56470 323 aa16.33■□□□□ 0.2
ATG4D-204ENST00000586417 ZNF616Q08AN1 781 aa16.33■□□□□ 0.2
ATG4D-204ENST00000586417 C2orf83Q53S99 150 aa16.33■□□□□ 0.2
ATG4D-204ENST00000586417 CCDC144NLQ6NUI1 221 aa16.33■□□□□ 0.2
ATG4D-204ENST00000586417 WDR83OSQ9Y284 106 aa16.33■□□□□ 0.2
ATG4D-204ENST00000586417 PLXNB1O43157 2135 aa16.32■□□□□ 0.2
ATG4D-204ENST00000586417 A0A1W2PN81 502 aa16.32■□□□□ 0.2
ATG4D-204ENST00000586417 IGKV1D-33P01593 117 aa16.32■□□□□ 0.2
ATG4D-204ENST00000586417 IGKV1-33P01594 117 aa16.32■□□□□ 0.2
ATG4D-204ENST00000586417 FGF7P21781 194 aa16.32■□□□□ 0.2
ATG4D-204ENST00000586417 CHRNA7P36544 502 aa16.32■□□□□ 0.2
ATG4D-204ENST00000586417 ATP5IP56385 69 aaPredicted RBP16.32■□□□□ 0.2
ATG4D-204ENST00000586417 SERF2P84101 59 aa16.32■□□□□ 0.2
ATG4D-204ENST00000586417 WT1-ASQ06250 92 aa16.32■□□□□ 0.2
ATG4D-204ENST00000586417 TUSC1Q2TAM9 212 aa16.32■□□□□ 0.2
ATG4D-204ENST00000586417 AKR1C8PQ5T2L2 129 aa16.32■□□□□ 0.2
ATG4D-204ENST00000586417 FBXL15Q9H469 300 aa16.32■□□□□ 0.2
ATG4D-204ENST00000586417 IGHV3OR16-10A0A075B7F0 116 aa16.31■□□□□ 0.2
ATG4D-204ENST00000586417 SSBP2P81877 361 aaPredicted RBP16.31■□□□□ 0.2
ATG4D-204ENST00000586417 PPP1R27Q86WC6 154 aa16.31■□□□□ 0.2
ATG4D-204ENST00000586417 EAF1Q96JC9 268 aaPredicted RBP16.31■□□□□ 0.2
ATG4D-204ENST00000586417 MOSP00540 346 aa16.31■□□□□ 0.2
ATG4D-204ENST00000586417 CD24P25063 80 aa16.31■□□□□ 0.2
ATG4D-204ENST00000586417 MAS1LP35410 378 aa16.31■□□□□ 0.2
ATG4D-204ENST00000586417 ARSJQ5FYB0 599 aaPredicted RBP16.31■□□□□ 0.2
ATG4D-204ENST00000586417 DPPA3Q6W0C5 159 aa16.31■□□□□ 0.2
ATG4D-204ENST00000586417 NPCDR1Q9BY65 106 aa16.31■□□□□ 0.2
ATG4D-204ENST00000586417 VSIRQ9H7M9 311 aa16.31■□□□□ 0.2
ATG4D-204ENST00000586417 NAV3Q8IVL0 2385 aa16.3■□□□□ 0.2
ATG4D-204ENST00000586417 CENPVL3A0A0U1RRI6 287 aa16.3■□□□□ 0.2
ATG4D-204ENST00000586417 NDUFA3O95167 84 aa16.3■□□□□ 0.2
ATG4D-204ENST00000586417 SNRNP70P08621 437 aaKnown RBP16.3■□□□□ 0.2
ATG4D-204ENST00000586417 SAA4P35542 130 aa16.3■□□□□ 0.2
ATG4D-204ENST00000586417 COMPP49747 757 aaPredicted RBP16.3■□□□□ 0.2
ATG4D-204ENST00000586417 HNF4GQ14541 408 aa16.3■□□□□ 0.2
ATG4D-204ENST00000586417 UQCC3Q6UW78 93 aa16.3■□□□□ 0.2
ATG4D-204ENST00000586417 TREML4Q6UXN2 200 aa16.3■□□□□ 0.2
ATG4D-204ENST00000586417 NPBQ8NG41 125 aa16.3■□□□□ 0.2
ATG4D-204ENST00000586417 MALSU1Q96EH3 234 aa16.3■□□□□ 0.2
ATG4D-204ENST00000586417 LINC00052Q96N35 136 aa16.3■□□□□ 0.2
ATG4D-204ENST00000586417 RPRMQ9NS64 109 aa16.3■□□□□ 0.2
ATG4D-204ENST00000586417 IGHV4-38-2P0DP08 117 aa16.29■□□□□ 0.2
ATG4D-204ENST00000586417 ERHP84090 104 aaKnown RBP16.29■□□□□ 0.2
ATG4D-204ENST00000586417 SRSF3P84103 164 aaKnown RBP16.29■□□□□ 0.2
ATG4D-204ENST00000586417 EBI3Q14213 229 aa16.29■□□□□ 0.2
ATG4D-204ENST00000586417 MMDQ15546 238 aa16.29■□□□□ 0.2
ATG4D-204ENST00000586417 TNXAQ16473 311 aa16.29■□□□□ 0.2
ATG4D-204ENST00000586417 PIP4P2Q8N4L2 257 aa16.29■□□□□ 0.2
ATG4D-204ENST00000586417 TRAV40A0A0B4J280 105 aa16.28■□□□□ 0.2
ATG4D-204ENST00000586417 IGLC7A0M8Q6 106 aa16.28■□□□□ 0.2
ATG4D-204ENST00000586417 J3QLI3 93 aa16.28■□□□□ 0.2
ATG4D-204ENST00000586417 FCN1O00602 326 aa16.28■□□□□ 0.2
ATG4D-204ENST00000586417 NBR2O15453 112 aa16.28■□□□□ 0.2
ATG4D-204ENST00000586417 TSPAN15O95858 294 aa16.28■□□□□ 0.2
ATG4D-204ENST00000586417 ZP3P21754 424 aa16.28■□□□□ 0.2
ATG4D-204ENST00000586417 SNCAP37840 140 aa16.28■□□□□ 0.2
ATG4D-204ENST00000586417 RPL27AP46776 148 aaKnown RBP16.28■□□□□ 0.2
ATG4D-204ENST00000586417 KLF17Q5JT82 389 aaPredicted RBP16.28■□□□□ 0.2
ATG4D-204ENST00000586417 SPSB3Q6PJ21 355 aa16.28■□□□□ 0.2
ATG4D-204ENST00000586417 Q8N6K4 173 aa16.28■□□□□ 0.2
ATG4D-204ENST00000586417 OR2T10Q8NGZ9 312 aa16.28■□□□□ 0.2
ATG4D-204ENST00000586417 TMUB1Q9BVT8 246 aa16.28■□□□□ 0.2
ATG4D-204ENST00000586417 SMCO3A2RU48 225 aa16.28■□□□□ 0.2
ATG4D-204ENST00000586417 FNDC10F2Z333 226 aa16.28■□□□□ 0.2
ATG4D-204ENST00000586417 NPFFO15130 113 aa16.28■□□□□ 0.2
ATG4D-204ENST00000586417 CD5LO43866 347 aa16.28■□□□□ 0.2
ATG4D-204ENST00000586417 ACSM6Q6P461 480 aa16.28■□□□□ 0.2
ATG4D-204ENST00000586417 LSM4Q9Y4Z0 139 aaKnown RBP16.28■□□□□ 0.2
ATG4D-204ENST00000586417 AGPAT2O15120 278 aa16.27■□□□□ 0.2
ATG4D-204ENST00000586417 ACTL6BO94805 426 aa16.27■□□□□ 0.2
ATG4D-204ENST00000586417 OR13C7P0DN81 318 aa16.27■□□□□ 0.2
ATG4D-204ENST00000586417 ELLP55199 621 aaPredicted RBP16.27■□□□□ 0.2
ATG4D-204ENST00000586417 RUSC1-AS1Q66K80 236 aa16.27■□□□□ 0.2
ATG4D-204ENST00000586417 BPIFCQ8NFQ6 507 aa16.27■□□□□ 0.2
ATG4D-204ENST00000586417 P2RX4Q99571 388 aa16.27■□□□□ 0.2
ATG4D-204ENST00000586417 TEX22C9J3V5 150 aa16.26■□□□□ 0.19
ATG4D-204ENST00000586417 KRBOX1C9JBD0 128 aa16.26■□□□□ 0.19
ATG4D-204ENST00000586417 MPDU1O75352 247 aa16.26■□□□□ 0.19
ATG4D-204ENST00000586417 H2AFB1P0C5Y9 115 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms