RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 Q6ZS49 121 aa7.92□□□□□ -1.14
CASC3-208ENST00000583649 LRRTM1Q86UE6 522 aa7.92□□□□□ -1.14
CASC3-208ENST00000583649 CBR4Q8N4T8 237 aa7.92□□□□□ -1.14
CASC3-208ENST00000583649 SYT8Q8NBV8 401 aa7.92□□□□□ -1.14
CASC3-208ENST00000583649 CSNK1G2-AS1Q8NCQ2 148 aa7.92□□□□□ -1.14
CASC3-208ENST00000583649 STXBP6Q8NFX7 210 aa7.92□□□□□ -1.14
CASC3-208ENST00000583649 OR1L8Q8NGR8 309 aa7.92□□□□□ -1.14
CASC3-208ENST00000583649 LSM10Q969L4 123 aaKnown RBP7.92□□□□□ -1.14
CASC3-208ENST00000583649 TMEM56Q96MV1 263 aa7.92□□□□□ -1.14
CASC3-208ENST00000583649 NEU1Q99519 415 aa7.92□□□□□ -1.14
CASC3-208ENST00000583649 NXF2Q9GZY0 626 aaKnown RBP7.92□□□□□ -1.14
CASC3-208ENST00000583649 TAS2R8Q9NYW2 309 aa7.92□□□□□ -1.14
CASC3-208ENST00000583649 RFNGQ9Y644 331 aa7.92□□□□□ -1.14
CASC3-208ENST00000583649 CGB1A6NKQ9 187 aa7.91□□□□□ -1.14
CASC3-208ENST00000583649 UPK2O00526 184 aa7.91□□□□□ -1.14
CASC3-208ENST00000583649 SLC17A2O00624 439 aa7.91□□□□□ -1.14
CASC3-208ENST00000583649 EREGO14944 169 aa7.91□□□□□ -1.14
CASC3-208ENST00000583649 RBFOX2O43251 390 aaKnown RBP eCLIP7.91□□□□□ -1.14
CASC3-208ENST00000583649 SCGB2A1O75556 95 aa7.91□□□□□ -1.14
CASC3-208ENST00000583649 HPRT1P00492 218 aa7.91□□□□□ -1.14
CASC3-208ENST00000583649 HOXA1P49639 335 aaPredicted RBP7.91□□□□□ -1.14
CASC3-208ENST00000583649 WNT4P56705 351 aa7.91□□□□□ -1.14
CASC3-208ENST00000583649 ERVK-16P61578 105 aa7.91□□□□□ -1.14
CASC3-208ENST00000583649 TMEM88Q6PEY1 159 aa7.91□□□□□ -1.14
CASC3-208ENST00000583649 SPAG16Q8N0X2 631 aa7.91□□□□□ -1.14
CASC3-208ENST00000583649 LYPD1Q8N2G4 141 aa7.91□□□□□ -1.14
CASC3-208ENST00000583649 APH1BQ8WW43 257 aa7.91□□□□□ -1.14
CASC3-208ENST00000583649 ST8SIA2Q92186 375 aa7.91□□□□□ -1.14
CASC3-208ENST00000583649 C9orf16Q9BUW7 83 aa7.91□□□□□ -1.14
CASC3-208ENST00000583649 HINT2Q9BX68 163 aa7.91□□□□□ -1.14
CASC3-208ENST00000583649 VSIRQ9H7M9 311 aa7.91□□□□□ -1.14
CASC3-208ENST00000583649 RAB22AQ9UL26 194 aa7.91□□□□□ -1.14
CASC3-208ENST00000583649 KNCNA6PVL3 124 aa7.9□□□□□ -1.14
CASC3-208ENST00000583649 FAM229AH3BQW9 127 aa7.9□□□□□ -1.14
CASC3-208ENST00000583649 CIB2O75838 187 aa7.9□□□□□ -1.14
CASC3-208ENST00000583649 ZNF688P0C7X2 276 aa7.9□□□□□ -1.14
CASC3-208ENST00000583649 BTF3P20290 206 aaKnown RBP7.9□□□□□ -1.14
CASC3-208ENST00000583649 NPPCP23582 126 aa7.9□□□□□ -1.14
CASC3-208ENST00000583649 SNRPD3P62318 126 aaKnown RBP7.9□□□□□ -1.14
CASC3-208ENST00000583649 SMN1Q16637 294 aaKnown RBP7.9□□□□□ -1.14
CASC3-208ENST00000583649 SERTAD4-AS1Q5TG53 156 aa7.9□□□□□ -1.14
CASC3-208ENST00000583649 OR10W1Q8NGF6 305 aa7.9□□□□□ -1.14
CASC3-208ENST00000583649 MAFIPQ8WZ33 124 aa7.9□□□□□ -1.14
CASC3-208ENST00000583649 SLC25A46Q96AG3 418 aa7.9□□□□□ -1.14
CASC3-208ENST00000583649 PGPEP1Q9NXJ5 209 aa7.9□□□□□ -1.14
CASC3-208ENST00000583649 FKBP11Q9NYL4 201 aa7.9□□□□□ -1.14
CASC3-208ENST00000583649 XCL2Q9UBD3 114 aa7.9□□□□□ -1.14
CASC3-208ENST00000583649 APOBP04114 4563 aaKnown RBP7.89□□□□□ -1.15
CASC3-208ENST00000583649 A0A075B6Q4 140 aa7.89□□□□□ -1.15
CASC3-208ENST00000583649 METTL21EPA6NDL7 271 aa7.89□□□□□ -1.15
CASC3-208ENST00000583649 K7EIM0 57 aa7.89□□□□□ -1.15
CASC3-208ENST00000583649 K7EQG2 157 aa7.89□□□□□ -1.15
CASC3-208ENST00000583649 ARL6IP5O75915 188 aa7.89□□□□□ -1.15
CASC3-208ENST00000583649 SNAPC5O75971 98 aa7.89□□□□□ -1.15
CASC3-208ENST00000583649 NFYAP23511 347 aaPredicted RBP7.89□□□□□ -1.15
CASC3-208ENST00000583649 DTYMKP23919 212 aa7.89□□□□□ -1.15
CASC3-208ENST00000583649 AP2S1P53680 142 aaPredicted RBP7.89□□□□□ -1.15
CASC3-208ENST00000583649 DAD1P61803 113 aa7.89□□□□□ -1.15
CASC3-208ENST00000583649 FAM222AQ5U5X8 452 aa7.89□□□□□ -1.15
CASC3-208ENST00000583649 TPRA1Q86W33 373 aa7.89□□□□□ -1.15
CASC3-208ENST00000583649 ZNF485Q8NCK3 441 aa7.89□□□□□ -1.15
CASC3-208ENST00000583649 ZBTB34Q8NCN2 500 aa7.89□□□□□ -1.15
CASC3-208ENST00000583649 OR10R2Q8NGX6 335 aa7.89□□□□□ -1.15
CASC3-208ENST00000583649 FAM3DQ96BQ1 224 aa7.89□□□□□ -1.15
CASC3-208ENST00000583649 MOB3AQ96BX8 217 aa7.89□□□□□ -1.15
CASC3-208ENST00000583649 METTL26Q96S19 204 aa7.89□□□□□ -1.15
CASC3-208ENST00000583649 CCDC90BQ9GZT6 254 aa7.89□□□□□ -1.15
CASC3-208ENST00000583649 DCSTAMPQ9H295 470 aa7.89□□□□□ -1.15
CASC3-208ENST00000583649 TMEM140Q9NV12 185 aa7.89□□□□□ -1.15
CASC3-208ENST00000583649 DKK2Q9UBU2 259 aa7.89□□□□□ -1.15
CASC3-208ENST00000583649 IGHV3-66A0A0C4DH42 116 aa7.88□□□□□ -1.15
CASC3-208ENST00000583649 HELTA6NFD8 242 aa7.88□□□□□ -1.15
CASC3-208ENST00000583649 WBP4O75554 376 aaKnown RBP7.88□□□□□ -1.15
CASC3-208ENST00000583649 IFNA5P01569 189 aa7.88□□□□□ -1.15
CASC3-208ENST00000583649 CD37P11049 281 aa7.88□□□□□ -1.15
CASC3-208ENST00000583649 HIST1H1DP16402 221 aaKnown RBP7.88□□□□□ -1.15
CASC3-208ENST00000583649 NPBWR1P48145 328 aa7.88□□□□□ -1.15
CASC3-208ENST00000583649 WT1-ASQ06250 92 aa7.88□□□□□ -1.15
CASC3-208ENST00000583649 CLINT1Q14677 625 aa7.88□□□□□ -1.15
CASC3-208ENST00000583649 MSMO1Q15800 293 aa7.88□□□□□ -1.15
CASC3-208ENST00000583649 POU2AF1Q16633 256 aa7.88□□□□□ -1.15
CASC3-208ENST00000583649 C2orf76Q3KRA6 126 aa7.88□□□□□ -1.15
CASC3-208ENST00000583649 ZNF600Q6ZNG1 722 aa7.88□□□□□ -1.15
CASC3-208ENST00000583649 C10orf67Q8IYJ2 551 aa7.88□□□□□ -1.15
CASC3-208ENST00000583649 CADM3Q8N126 398 aa7.88□□□□□ -1.15
CASC3-208ENST00000583649 FAM24BQ8N5W8 94 aa7.88□□□□□ -1.15
CASC3-208ENST00000583649 OR1P1Q8NH06 330 aa7.88□□□□□ -1.15
CASC3-208ENST00000583649 ZNRF2Q8NHG8 242 aa7.88□□□□□ -1.15
CASC3-208ENST00000583649 MISP3Q96FF7 219 aa7.88□□□□□ -1.15
CASC3-208ENST00000583649 RAB40CQ96S21 281 aa7.88□□□□□ -1.15
CASC3-208ENST00000583649 PLEKHA2Q9HB19 425 aa7.88□□□□□ -1.15
CASC3-208ENST00000583649 KCNK7Q9Y2U2 307 aa7.88□□□□□ -1.15
CASC3-208ENST00000583649 IGHV3OR16-12A0A075B7B8 117 aa7.87□□□□□ -1.15
CASC3-208ENST00000583649 TEX50A0A1B0GTY4 177 aa7.87□□□□□ -1.15
CASC3-208ENST00000583649 ATP8B1O43520 1251 aa7.87□□□□□ -1.15
CASC3-208ENST00000583649 IGLV2-14P01704 120 aa7.87□□□□□ -1.15
CASC3-208ENST00000583649 ALDH3B2P48448 385 aa7.87□□□□□ -1.15
CASC3-208ENST00000583649 PSMG4Q5JS54 123 aa7.87□□□□□ -1.15
CASC3-208ENST00000583649 OGFRL1Q5TC84 451 aaPredicted RBP7.87□□□□□ -1.15
CASC3-208ENST00000583649 CDPF1Q6NVV7 123 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms