RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 COMMD5Q9GZQ3 224 aa6.09□□□□□ -1.43
SMG1-214ENST00000568038 MED28Q9H204 178 aa6.09□□□□□ -1.43
SMG1-214ENST00000568038 PARP11Q9NR21 331 aa6.09□□□□□ -1.43
SMG1-214ENST00000568038 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.09□□□□□ -1.43
SMG1-214ENST00000568038 GSKIPQ9P0R6 139 aa6.09□□□□□ -1.43
SMG1-214ENST00000568038 MGAT4CQ9UBM8 478 aa6.09□□□□□ -1.43
SMG1-214ENST00000568038 LINC00527Q9UJ94 153 aa6.09□□□□□ -1.43
SMG1-214ENST00000568038 TEX50A0A1B0GTY4 177 aa6.08□□□□□ -1.44
SMG1-214ENST00000568038 HMX3A6NHT5 357 aa6.08□□□□□ -1.44
SMG1-214ENST00000568038 MSGN1A6NI15 193 aa6.08□□□□□ -1.44
SMG1-214ENST00000568038 E7EUB6 86 aa6.08□□□□□ -1.44
SMG1-214ENST00000568038 ATP6V0E1O15342 81 aa6.08□□□□□ -1.44
SMG1-214ENST00000568038 IGHG2P01859 326 aa6.08□□□□□ -1.44
SMG1-214ENST00000568038 APELAP0DMC3 54 aa6.08□□□□□ -1.44
SMG1-214ENST00000568038 EGR2P11161 476 aaPredicted RBP6.08□□□□□ -1.44
SMG1-214ENST00000568038 SLC25A6P12236 298 aa6.08□□□□□ -1.44
SMG1-214ENST00000568038 COMPP49747 757 aaPredicted RBP6.08□□□□□ -1.44
SMG1-214ENST00000568038 RPL15P61313 204 aaKnown RBP6.08□□□□□ -1.44
SMG1-214ENST00000568038 NDPQ00604 133 aa6.08□□□□□ -1.44
SMG1-214ENST00000568038 FCN2Q15485 313 aa6.08□□□□□ -1.44
SMG1-214ENST00000568038 C19orf54Q5BKX5 351 aa6.08□□□□□ -1.44
SMG1-214ENST00000568038 CXorf66Q5JRM2 361 aaPredicted RBP6.08□□□□□ -1.44
SMG1-214ENST00000568038 FOXRED2Q8IWF2 684 aa6.08□□□□□ -1.44
SMG1-214ENST00000568038 ZBTB8BQ8NAP8 495 aaPredicted RBP6.08□□□□□ -1.44
SMG1-214ENST00000568038 OR1L8Q8NGR8 309 aa6.08□□□□□ -1.44
SMG1-214ENST00000568038 SRSF12Q8WXF0 261 aaKnown RBP6.08□□□□□ -1.44
SMG1-214ENST00000568038 ARPC1AQ92747 370 aa6.08□□□□□ -1.44
SMG1-214ENST00000568038 C2orf50Q96LR7 162 aa6.08□□□□□ -1.44
SMG1-214ENST00000568038 NOL4LQ96MY1 436 aaPredicted RBP6.08□□□□□ -1.44
SMG1-214ENST00000568038 SPIN2AQ99865 258 aa6.08□□□□□ -1.44
SMG1-214ENST00000568038 SPIN2BQ9BPZ2 258 aa6.08□□□□□ -1.44
SMG1-214ENST00000568038 PDCD10Q9BUL8 212 aa6.08□□□□□ -1.44
SMG1-214ENST00000568038 TMEM14BQ9NUH8 114 aa6.08□□□□□ -1.44
SMG1-214ENST00000568038 FKBP11Q9NYL4 201 aa6.08□□□□□ -1.44
SMG1-214ENST00000568038 FOXA2Q9Y261 457 aaPredicted RBP6.08□□□□□ -1.44
SMG1-214ENST00000568038 FBXO7Q9Y3I1 522 aa6.08□□□□□ -1.44
SMG1-214ENST00000568038 WSB1Q9Y6I7 421 aa6.08□□□□□ -1.44
SMG1-214ENST00000568038 TNCP24821 2201 aa6.08□□□□□ -1.44
SMG1-214ENST00000568038 A0A1B0GVG6 124 aa6.07□□□□□ -1.44
SMG1-214ENST00000568038 A0A1B0GW64 132 aa6.07□□□□□ -1.44
SMG1-214ENST00000568038 CGB1A6NKQ9 187 aa6.07□□□□□ -1.44
SMG1-214ENST00000568038 CEBPZOSA8MTT3 80 aa6.07□□□□□ -1.44
SMG1-214ENST00000568038 G3V318 75 aa6.07□□□□□ -1.44
SMG1-214ENST00000568038 KCNAB3O43448 404 aa6.07□□□□□ -1.44
SMG1-214ENST00000568038 PITX3O75364 302 aa6.07□□□□□ -1.44
SMG1-214ENST00000568038 TSPAN9O75954 239 aa6.07□□□□□ -1.44
SMG1-214ENST00000568038 FGF2P09038 288 aa6.07□□□□□ -1.44
SMG1-214ENST00000568038 TRAPPC2P0DI81 140 aa6.07□□□□□ -1.44
SMG1-214ENST00000568038 TRAPPC2BP0DI82 140 aa6.07□□□□□ -1.44
SMG1-214ENST00000568038 CXCL3P19876 107 aa6.07□□□□□ -1.44
SMG1-214ENST00000568038 VDAC2P45880 294 aaPredicted RBP6.07□□□□□ -1.44
SMG1-214ENST00000568038 SPCS3P61009 180 aa6.07□□□□□ -1.44
SMG1-214ENST00000568038 HSPE1P61604 102 aaKnown RBP6.07□□□□□ -1.44
SMG1-214ENST00000568038 RRAS2P62070 204 aaPredicted RBP6.07□□□□□ -1.44
SMG1-214ENST00000568038 ECSCRQ19T08 205 aa6.07□□□□□ -1.44
SMG1-214ENST00000568038 UNQ5815/PRO19632Q6UWF5 114 aa6.07□□□□□ -1.44
SMG1-214ENST00000568038 ZNF429Q86V71 674 aa6.07□□□□□ -1.44
SMG1-214ENST00000568038 Q8N2B8 174 aa6.07□□□□□ -1.44
SMG1-214ENST00000568038 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.07□□□□□ -1.44
SMG1-214ENST00000568038 LFNGQ8NES3 379 aa6.07□□□□□ -1.44
SMG1-214ENST00000568038 OR11H7Q8NGC8 314 aa6.07□□□□□ -1.44
SMG1-214ENST00000568038 OR10W1Q8NGF6 305 aa6.07□□□□□ -1.44
SMG1-214ENST00000568038 OR4D5Q8NGN0 318 aa6.07□□□□□ -1.44
SMG1-214ENST00000568038 OR5M8Q8NGP6 311 aa6.07□□□□□ -1.44
SMG1-214ENST00000568038 OR5B3Q8NH48 314 aa6.07□□□□□ -1.44
SMG1-214ENST00000568038 OR2T6Q8NHC8 308 aa6.07□□□□□ -1.44
SMG1-214ENST00000568038 SGMS2Q8NHU3 365 aa6.07□□□□□ -1.44
SMG1-214ENST00000568038 MAGT1Q9H0U3 335 aa6.07□□□□□ -1.44
SMG1-214ENST00000568038 COA4Q9NYJ1 87 aa6.07□□□□□ -1.44
SMG1-214ENST00000568038 ZNF257Q9Y2Q1 563 aa6.07□□□□□ -1.44
SMG1-214ENST00000568038 TET2Q6N021 2002 aaPredicted RBP6.07□□□□□ -1.44
SMG1-214ENST00000568038 MTORP42345 2549 aa6.07□□□□□ -1.44
SMG1-214ENST00000568038 TRAV41A0A0B4J266 112 aa6.06□□□□□ -1.44
SMG1-214ENST00000568038 B5MCH6 92 aa6.06□□□□□ -1.44
SMG1-214ENST00000568038 TEX22C9J3V5 150 aa6.06□□□□□ -1.44
SMG1-214ENST00000568038 AP4M1O00189 453 aa6.06□□□□□ -1.44
SMG1-214ENST00000568038 WRBO00258 174 aa6.06□□□□□ -1.44
SMG1-214ENST00000568038 NDUFA7O95182 113 aa6.06□□□□□ -1.44
SMG1-214ENST00000568038 REG1AP05451 166 aa6.06□□□□□ -1.44
SMG1-214ENST00000568038 IAPPP10997 89 aa6.06□□□□□ -1.44
SMG1-214ENST00000568038 AREGP15514 252 aa6.06□□□□□ -1.44
SMG1-214ENST00000568038 NKX2-1P43699 371 aaPredicted RBP6.06□□□□□ -1.44
SMG1-214ENST00000568038 HOXA1P49639 335 aaPredicted RBP6.06□□□□□ -1.44
SMG1-214ENST00000568038 H2BFSP57053 126 aa6.06□□□□□ -1.44
SMG1-214ENST00000568038 POLR2GP62487 172 aaKnown RBP eCLIP6.06□□□□□ -1.44
SMG1-214ENST00000568038 PRCDQ00LT1 54 aa6.06□□□□□ -1.44
SMG1-214ENST00000568038 TNFRSF9Q07011 255 aa6.06□□□□□ -1.44
SMG1-214ENST00000568038 TMEM267Q0VDI3 215 aaPredicted RBP6.06□□□□□ -1.44
SMG1-214ENST00000568038 C11orf87Q6NUJ2 197 aa6.06□□□□□ -1.44
SMG1-214ENST00000568038 STPG2Q8N412 459 aa6.06□□□□□ -1.44
SMG1-214ENST00000568038 OR5T1Q8NG75 326 aa6.06□□□□□ -1.44
SMG1-214ENST00000568038 OR52E5Q8NH55 327 aa6.06□□□□□ -1.44
SMG1-214ENST00000568038 LINC01006Q8NI28 216 aa6.06□□□□□ -1.44
SMG1-214ENST00000568038 RBKSQ9H477 322 aa6.06□□□□□ -1.44
SMG1-214ENST00000568038 C16orf95Q9H693 158 aa6.06□□□□□ -1.44
SMG1-214ENST00000568038 PLEKHA3Q9HB20 300 aa6.06□□□□□ -1.44
SMG1-214ENST00000568038 ENY2Q9NPA8 101 aa6.06□□□□□ -1.44
SMG1-214ENST00000568038 NDUFA4L2Q9NRX3 87 aa6.06□□□□□ -1.44
SMG1-214ENST00000568038 SERTAD4Q9NUC0 356 aa6.06□□□□□ -1.44
SMG1-214ENST00000568038 LSM5Q9Y4Y9 91 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms