RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 OR51I1Q9H343 314 aa1.51□□□□□ -2.17
CHD9-215ENST00000565442 XPNPEP1Q9NQW7 623 aa1.51□□□□□ -2.17
CHD9-215ENST00000565442 AK3Q9UIJ7 227 aa1.51□□□□□ -2.17
CHD9-215ENST00000565442 RGPD2P0DJD1 1756 aa1.51□□□□□ -2.17
CHD9-215ENST00000565442 COL4A1P02462 1669 aa1.51□□□□□ -2.17
CHD9-215ENST00000565442 TOPAZ1Q8N9V7 1692 aa1.51□□□□□ -2.17
CHD9-215ENST00000565442 NRKQ7Z2Y5 1582 aa1.51□□□□□ -2.17
CHD9-215ENST00000565442 ZFHX2Q9C0A1 2572 aaPredicted RBP1.51□□□□□ -2.17
CHD9-215ENST00000565442 TRPM2O94759 1503 aa1.5□□□□□ -2.17
CHD9-215ENST00000565442 PTPRBP23467 1997 aa1.5□□□□□ -2.17
CHD9-215ENST00000565442 FLT4P35916 1363 aa1.5□□□□□ -2.17
CHD9-215ENST00000565442 KIF20BQ96Q89 1820 aa1.5□□□□□ -2.17
CHD9-215ENST00000565442 ITSN1Q15811 1721 aa1.5□□□□□ -2.17
CHD9-215ENST00000565442 FMN2Q9NZ56 1722 aa1.5□□□□□ -2.17
CHD9-215ENST00000565442 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.5□□□□□ -2.17
CHD9-215ENST00000565442 HMSDA8MTL9 139 aa1.5□□□□□ -2.17
CHD9-215ENST00000565442 LEPROTO15243 131 aa1.5□□□□□ -2.17
CHD9-215ENST00000565442 CCL5P13501 91 aa1.5□□□□□ -2.17
CHD9-215ENST00000565442 MSNP26038 577 aaKnown RBP1.5□□□□□ -2.17
CHD9-215ENST00000565442 ALDH3A1P30838 453 aa1.5□□□□□ -2.17
CHD9-215ENST00000565442 HAAOP46952 286 aa1.5□□□□□ -2.17
CHD9-215ENST00000565442 CSN1S1P47710 185 aa1.5□□□□□ -2.17
CHD9-215ENST00000565442 OR4D2P58180 307 aa1.5□□□□□ -2.17
CHD9-215ENST00000565442 C10orf67Q8IYJ2 551 aa1.5□□□□□ -2.17
CHD9-215ENST00000565442 DEFB125Q8N687 156 aa1.5□□□□□ -2.17
CHD9-215ENST00000565442 OR51D1Q8NGF3 324 aa1.5□□□□□ -2.17
CHD9-215ENST00000565442 MRPL32Q9BYC8 188 aaKnown RBP1.5□□□□□ -2.17
CHD9-215ENST00000565442 C8orf4Q9NR00 106 aa1.5□□□□□ -2.17
CHD9-215ENST00000565442 PAQR5Q9NXK6 330 aaPredicted RBP1.5□□□□□ -2.17
CHD9-215ENST00000565442 TIMM22Q9Y584 194 aa1.5□□□□□ -2.17
CHD9-215ENST00000565442 SHPRHQ149N8 1683 aa1.5□□□□□ -2.17
CHD9-215ENST00000565442 PTPRSQ13332 1948 aa1.5□□□□□ -2.17
CHD9-215ENST00000565442 DUOX2Q9NRD8 1548 aa1.5□□□□□ -2.17
CHD9-215ENST00000565442 TULP4Q9NRJ4 1543 aa1.5□□□□□ -2.17
CHD9-215ENST00000565442 NKTRP30414 1462 aaKnown RBP1.5□□□□□ -2.17
CHD9-215ENST00000565442 ERVK-7P63135 1459 aa1.5□□□□□ -2.17
CHD9-215ENST00000565442 ZNF518AQ6AHZ1 1483 aa1.5□□□□□ -2.17
CHD9-215ENST00000565442 MALRD1Q5VYJ5 2156 aa1.49□□□□□ -2.17
CHD9-215ENST00000565442 HFM1A2PYH4 1435 aa1.49□□□□□ -2.17
CHD9-215ENST00000565442 AKAP12Q02952 1782 aa1.49□□□□□ -2.17
CHD9-215ENST00000565442 KNDC1Q76NI1 1749 aa1.49□□□□□ -2.17
CHD9-215ENST00000565442 XRN1Q8IZH2 1706 aaKnown RBP1.49□□□□□ -2.17
CHD9-215ENST00000565442 CRYBG1Q9Y4K1 1723 aa1.49□□□□□ -2.17
CHD9-215ENST00000565442 ALKQ9UM73 1620 aa1.49□□□□□ -2.17
CHD9-215ENST00000565442 ACOX3O15254 700 aa1.49□□□□□ -2.17
CHD9-215ENST00000565442 TGOLN2O43493 480 aa1.49□□□□□ -2.17
CHD9-215ENST00000565442 KRT75O95678 551 aa1.49□□□□□ -2.17
CHD9-215ENST00000565442 NAPSAO96009 420 aa1.49□□□□□ -2.17
CHD9-215ENST00000565442 ISG15P05161 165 aa1.49□□□□□ -2.17
CHD9-215ENST00000565442 UCHL3P15374 230 aa1.49□□□□□ -2.17
CHD9-215ENST00000565442 HLA-DMBP28068 263 aa1.49□□□□□ -2.17
CHD9-215ENST00000565442 S100A7P31151 101 aa1.49□□□□□ -2.17
CHD9-215ENST00000565442 MAGEA12P43365 314 aa1.49□□□□□ -2.17
CHD9-215ENST00000565442 MARCKSL1P49006 195 aa1.49□□□□□ -2.17
CHD9-215ENST00000565442 ACSM3Q53FZ2 586 aa1.49□□□□□ -2.17
CHD9-215ENST00000565442 COQ5Q5HYK3 327 aa1.49□□□□□ -2.17
CHD9-215ENST00000565442 SFXN4Q6P4A7 337 aa1.49□□□□□ -2.17
CHD9-215ENST00000565442 SLC36A1Q7Z2H8 476 aa1.49□□□□□ -2.17
CHD9-215ENST00000565442 GPR32P1Q8NGA4 272 aa1.49□□□□□ -2.17
CHD9-215ENST00000565442 OR5B17Q8NGF7 314 aa1.49□□□□□ -2.17
CHD9-215ENST00000565442 RNF133Q8WVZ7 376 aa1.49□□□□□ -2.17
CHD9-215ENST00000565442 ACOT12Q8WYK0 555 aa1.49□□□□□ -2.17
CHD9-215ENST00000565442 PTH2Q96A98 100 aa1.49□□□□□ -2.17
CHD9-215ENST00000565442 ERMAPQ96PL5 475 aaPredicted RBP1.49□□□□□ -2.17
CHD9-215ENST00000565442 FAM96AQ9H5X1 160 aa1.49□□□□□ -2.17
CHD9-215ENST00000565442 ANGPT4Q9Y264 503 aa1.49□□□□□ -2.17
CHD9-215ENST00000565442 PRRC2BQ5JSZ5 2229 aaKnown RBP1.49□□□□□ -2.17
CHD9-215ENST00000565442 RGPD5Q99666 1765 aa1.49□□□□□ -2.17
CHD9-215ENST00000565442 NEO1Q92859 1461 aa1.49□□□□□ -2.17
CHD9-215ENST00000565442 PEAK1Q9H792 1746 aa1.49□□□□□ -2.17
CHD9-215ENST00000565442 NCOA1Q15788 1441 aa1.49□□□□□ -2.17
CHD9-215ENST00000565442 ERBINQ96RT1 1412 aa1.49□□□□□ -2.17
CHD9-215ENST00000565442 SETD5Q9C0A6 1442 aa1.49□□□□□ -2.17
CHD9-215ENST00000565442 ANKRD50Q9ULJ7 1429 aa1.49□□□□□ -2.17
CHD9-215ENST00000565442 PHRF1Q9P1Y6 1649 aaKnown RBP1.48□□□□□ -2.17
CHD9-215ENST00000565442 CPAMD8Q8IZJ3 1885 aa1.48□□□□□ -2.17
CHD9-215ENST00000565442 VIRMAQ69YN4 1812 aaKnown RBP1.48□□□□□ -2.17
CHD9-215ENST00000565442 WNK3Q9BYP7 1800 aa1.48□□□□□ -2.17
CHD9-215ENST00000565442 A0A0D9SEW6 157 aa1.48□□□□□ -2.17
CHD9-215ENST00000565442 IGKV2-29A2NJV5 120 aaPredicted RBP1.48□□□□□ -2.17
CHD9-215ENST00000565442 SERPINA7P05543 415 aa1.48□□□□□ -2.17
CHD9-215ENST00000565442 CALB1P05937 261 aa1.48□□□□□ -2.17
CHD9-215ENST00000565442 KRT7P08729 469 aa1.48□□□□□ -2.17
CHD9-215ENST00000565442 FAM228BP0C875 321 aa1.48□□□□□ -2.17
CHD9-215ENST00000565442 POLR2GP62487 172 aaKnown RBP eCLIP1.48□□□□□ -2.17
CHD9-215ENST00000565442 C9orf64Q5T6V5 341 aa1.48□□□□□ -2.17
CHD9-215ENST00000565442 RPP25LQ8N5L8 163 aaKnown RBP1.48□□□□□ -2.17
CHD9-215ENST00000565442 ZNF676Q8N7Q3 588 aa1.48□□□□□ -2.17
CHD9-215ENST00000565442 ANKRD7Q92527 254 aa1.48□□□□□ -2.17
CHD9-215ENST00000565442 OR8D2Q9GZM6 311 aa1.48□□□□□ -2.17
CHD9-215ENST00000565442 CST9LQ9H4G1 147 aa1.48□□□□□ -2.17
CHD9-215ENST00000565442 XAGE1AQ9HD64 81 aa1.48□□□□□ -2.17
CHD9-215ENST00000565442 LTN1O94822 1766 aa1.48□□□□□ -2.17
CHD9-215ENST00000565442 SDK1Q7Z5N4 2213 aa1.48□□□□□ -2.17
CHD9-215ENST00000565442 RGPD1P0DJD0 1748 aa1.48□□□□□ -2.17
CHD9-215ENST00000565442 MON2Q7Z3U7 1717 aa1.48□□□□□ -2.17
CHD9-215ENST00000565442 ANKRD26Q9UPS8 1709 aa1.48□□□□□ -2.17
CHD9-215ENST00000565442 PIK3C2AO00443 1686 aa1.48□□□□□ -2.17
CHD9-215ENST00000565442 ADGRB1O14514 1584 aa1.47□□□□□ -2.17
CHD9-215ENST00000565442 DIP2AQ14689 1571 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms