RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 OR13C7P0DN81 318 aa10.14□□□□□ -0.79
USP3-213ENST00000559711 PAX6P26367 422 aa10.14□□□□□ -0.79
USP3-213ENST00000559711 SUB1P53999 127 aaKnown RBP eCLIP10.14□□□□□ -0.79
USP3-213ENST00000559711 SSBP2P81877 361 aaPredicted RBP10.14□□□□□ -0.79
USP3-213ENST00000559711 MMDQ15546 238 aa10.14□□□□□ -0.79
USP3-213ENST00000559711 TNXAQ16473 311 aa10.14□□□□□ -0.79
USP3-213ENST00000559711 CLEC12BQ2HXU8 276 aa10.14□□□□□ -0.79
USP3-213ENST00000559711 ACSM6Q6P461 480 aa10.14□□□□□ -0.79
USP3-213ENST00000559711 MRPL41Q8IXM3 137 aaKnown RBP10.14□□□□□ -0.79
USP3-213ENST00000559711 Q8N6K4 173 aa10.14□□□□□ -0.79
USP3-213ENST00000559711 SFT2D1Q8WV19 159 aa10.14□□□□□ -0.79
USP3-213ENST00000559711 CACNG8Q8WXS5 425 aa10.14□□□□□ -0.79
USP3-213ENST00000559711 P2RX4Q99571 388 aa10.14□□□□□ -0.79
USP3-213ENST00000559711 CENPEQ02224 2701 aa10.13□□□□□ -0.79
USP3-213ENST00000559711 J3QKU1 62 aa10.13□□□□□ -0.79
USP3-213ENST00000559711 GPX4P36969 197 aaPredicted RBP10.13□□□□□ -0.79
USP3-213ENST00000559711 OPRK1P41145 380 aa10.13□□□□□ -0.79
USP3-213ENST00000559711 KRTAP10-9P60411 292 aa10.13□□□□□ -0.79
USP3-213ENST00000559711 CCL20P78556 96 aa10.13□□□□□ -0.79
USP3-213ENST00000559711 AKR1C1Q04828 323 aa10.13□□□□□ -0.79
USP3-213ENST00000559711 HNF4GQ14541 408 aa10.13□□□□□ -0.79
USP3-213ENST00000559711 ZNF726P1Q15940 193 aa10.13□□□□□ -0.79
USP3-213ENST00000559711 FFAR4Q5NUL3 377 aa10.13□□□□□ -0.79
USP3-213ENST00000559711 RPP25LQ8N5L8 163 aaKnown RBP10.13□□□□□ -0.79
USP3-213ENST00000559711 ZNF114Q8NC26 417 aa10.13□□□□□ -0.79
USP3-213ENST00000559711 RNASEH2CQ8TDP1 164 aaKnown RBP10.13□□□□□ -0.79
USP3-213ENST00000559711 RCC1LQ96I51 464 aaKnown RBP10.13□□□□□ -0.79
USP3-213ENST00000559711 MGST2Q99735 147 aa10.13□□□□□ -0.79
USP3-213ENST00000559711 SRSF8Q9BRL6 282 aaKnown RBP10.13□□□□□ -0.79
USP3-213ENST00000559711 PTPN13Q12923 2485 aa10.12□□□□□ -0.79
USP3-213ENST00000559711 TEX22C9J3V5 150 aa10.12□□□□□ -0.79
USP3-213ENST00000559711 NPFFO15130 113 aa10.12□□□□□ -0.79
USP3-213ENST00000559711 MSMBP08118 114 aa10.12□□□□□ -0.79
USP3-213ENST00000559711 CD24P25063 80 aa10.12□□□□□ -0.79
USP3-213ENST00000559711 SAA4P35542 130 aa10.12□□□□□ -0.79
USP3-213ENST00000559711 ELLP55199 621 aaPredicted RBP10.12□□□□□ -0.79
USP3-213ENST00000559711 RAB2AP61019 212 aa10.12□□□□□ -0.79
USP3-213ENST00000559711 CD69Q07108 199 aa10.12□□□□□ -0.79
USP3-213ENST00000559711 GUK1Q16774 197 aa10.12□□□□□ -0.79
USP3-213ENST00000559711 TEPPQ6URK8 271 aa10.12□□□□□ -0.79
USP3-213ENST00000559711 TMEM144Q7Z5S9 345 aa10.12□□□□□ -0.79
USP3-213ENST00000559711 GGTLC1Q9BX51 225 aa10.12□□□□□ -0.79
USP3-213ENST00000559711 TREM1Q9NP99 234 aa10.12□□□□□ -0.79
USP3-213ENST00000559711 BEX4Q9NWD9 120 aaPredicted RBP10.12□□□□□ -0.79
USP3-213ENST00000559711 KIAA1456Q9P272 454 aa10.12□□□□□ -0.79
USP3-213ENST00000559711 FAM96BQ9Y3D0 163 aa10.12□□□□□ -0.79
USP3-213ENST00000559711 CELSR2Q9HCU4 2923 aa10.12□□□□□ -0.79
USP3-213ENST00000559711 A0A096LNT2 108 aa10.12□□□□□ -0.79
USP3-213ENST00000559711 M6PRP20645 277 aa10.12□□□□□ -0.79
USP3-213ENST00000559711 GAMTQ14353 236 aa10.12□□□□□ -0.79
USP3-213ENST00000559711 HES1Q14469 280 aa10.12□□□□□ -0.79
USP3-213ENST00000559711 PLGLAQ15195 96 aa10.12□□□□□ -0.79
USP3-213ENST00000559711 C5orf64Q2M2E5 130 aa10.12□□□□□ -0.79
USP3-213ENST00000559711 FBLN7Q53RD9 439 aa10.12□□□□□ -0.79
USP3-213ENST00000559711 C10orf91Q5T1B1 145 aa10.12□□□□□ -0.79
USP3-213ENST00000559711 CCDC28AQ8IWP9 274 aa10.12□□□□□ -0.79
USP3-213ENST00000559711 PIP4P2Q8N4L2 257 aa10.12□□□□□ -0.79
USP3-213ENST00000559711 SRSF12Q8WXF0 261 aaKnown RBP10.12□□□□□ -0.79
USP3-213ENST00000559711 NARS2Q96I59 477 aaKnown RBP10.12□□□□□ -0.79
USP3-213ENST00000559711 PBDC1Q9BVG4 233 aa10.12□□□□□ -0.79
USP3-213ENST00000559711 TMEM231Q9H6L2 316 aa10.12□□□□□ -0.79
USP3-213ENST00000559711 B4DSR2 109 aa10.11□□□□□ -0.79
USP3-213ENST00000559711 C9JQL5 133 aa10.11□□□□□ -0.79
USP3-213ENST00000559711 GNB1P62873 340 aa10.11□□□□□ -0.79
USP3-213ENST00000559711 RAB31Q13636 194 aa10.11□□□□□ -0.79
USP3-213ENST00000559711 PMS2P11Q13670 270 aa10.11□□□□□ -0.79
USP3-213ENST00000559711 PEA15Q15121 130 aa10.11□□□□□ -0.79
USP3-213ENST00000559711 ACOT6Q3I5F7 207 aaPredicted RBP10.11□□□□□ -0.79
USP3-213ENST00000559711 SSX7Q7RTT5 188 aa10.11□□□□□ -0.79
USP3-213ENST00000559711 LRRC75A-AS1Q8N1F1 130 aa10.11□□□□□ -0.79
USP3-213ENST00000559711 OR10G4Q8NGN3 311 aa10.11□□□□□ -0.79
USP3-213ENST00000559711 OR10G9Q8NGN4 311 aa10.11□□□□□ -0.79
USP3-213ENST00000559711 OR10G7Q8NGN6 311 aa10.11□□□□□ -0.79
USP3-213ENST00000559711 SMDT1Q9H4I9 107 aa10.11□□□□□ -0.79
USP3-213ENST00000559711 KCNIP2Q9NS61 270 aa10.11□□□□□ -0.79
USP3-213ENST00000559711 TENM4Q6N022 2769 aa10.11□□□□□ -0.79
USP3-213ENST00000559711 IGHV1-69DA0A0B4J2H0 117 aa10.1□□□□□ -0.79
USP3-213ENST00000559711 A0A1B0GV50 99 aa10.1□□□□□ -0.79
USP3-213ENST00000559711 IGHV1-69P01742 117 aa10.1□□□□□ -0.79
USP3-213ENST00000559711 FAM106CPP0CH98 169 aa10.1□□□□□ -0.79
USP3-213ENST00000559711 AREGP15514 252 aa10.1□□□□□ -0.79
USP3-213ENST00000559711 BRS3P32247 399 aa10.1□□□□□ -0.79
USP3-213ENST00000559711 RPL29P47914 159 aaKnown RBP10.1□□□□□ -0.79
USP3-213ENST00000559711 MLANAQ16655 118 aa10.1□□□□□ -0.79
USP3-213ENST00000559711 SLC16A13Q7RTY0 426 aa10.1□□□□□ -0.79
USP3-213ENST00000559711 OR1P1Q8NH06 330 aa10.1□□□□□ -0.79
USP3-213ENST00000559711 ACTR3CQ9C0K3 210 aaPredicted RBP10.1□□□□□ -0.79
USP3-213ENST00000559711 SLC39A9Q9NUM3 307 aa10.1□□□□□ -0.79
USP3-213ENST00000559711 PXMP4Q9Y6I8 212 aa10.1□□□□□ -0.79
USP3-213ENST00000559711 WNK2Q9Y3S1 2297 aa10.1□□□□□ -0.79
USP3-213ENST00000559711 TRAV20A0A0B4J274 112 aa10.09□□□□□ -0.79
USP3-213ENST00000559711 CTXND1A0A1B0GTU2 59 aa10.09□□□□□ -0.79
USP3-213ENST00000559711 RBFOX3A6NFN3 312 aa10.09□□□□□ -0.79
USP3-213ENST00000559711 SEC14L6B5MCN3 397 aa10.09□□□□□ -0.79
USP3-213ENST00000559711 CYB5BO43169 146 aa10.09□□□□□ -0.79
USP3-213ENST00000559711 YIF1AO95070 293 aa10.09□□□□□ -0.79
USP3-213ENST00000559711 REG1AP05451 166 aa10.09□□□□□ -0.79
USP3-213ENST00000559711 TMEM11P17152 192 aa10.09□□□□□ -0.79
USP3-213ENST00000559711 ADCYAP1P18509 176 aa10.09□□□□□ -0.79
USP3-213ENST00000559711 GATA3P23771 443 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms