RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 ZC4H2Q9NQZ6 224 aa9.08□□□□□ -0.96
SYNE2-226ENST00000557084 TMEM14BQ9NUH8 114 aa9.08□□□□□ -0.96
SYNE2-226ENST00000557084 U3KQK5 164 aa9.08□□□□□ -0.96
SYNE2-226ENST00000557084 NBEAL2Q6ZNJ1 2754 aa9.07□□□□□ -0.96
SYNE2-226ENST00000557084 TEX13DA0A0J9YY54 714 aaPredicted RBP9.07□□□□□ -0.96
SYNE2-226ENST00000557084 LGALS9O00182 355 aa9.07□□□□□ -0.96
SYNE2-226ENST00000557084 CTDSPLO15194 276 aa9.07□□□□□ -0.96
SYNE2-226ENST00000557084 B3GALNT1O75752 331 aa9.07□□□□□ -0.96
SYNE2-226ENST00000557084 CTSDP07339 412 aaPredicted RBP9.07□□□□□ -0.96
SYNE2-226ENST00000557084 FOLR2P14207 255 aa9.07□□□□□ -0.96
SYNE2-226ENST00000557084 KLK9Q2XQG4 91 aa9.07□□□□□ -0.96
SYNE2-226ENST00000557084 FAAP20Q6NZ36 180 aa9.07□□□□□ -0.96
SYNE2-226ENST00000557084 UBAC2Q8NBM4 344 aa9.07□□□□□ -0.96
SYNE2-226ENST00000557084 OR2K2Q8NGT1 345 aa9.07□□□□□ -0.96
SYNE2-226ENST00000557084 ZNF502Q8TBZ5 544 aa9.07□□□□□ -0.96
SYNE2-226ENST00000557084 VN1R17PQ8TDU5 208 aa9.07□□□□□ -0.96
SYNE2-226ENST00000557084 PRRT1Q99946 306 aa9.07□□□□□ -0.96
SYNE2-226ENST00000557084 PDCD10Q9BUL8 212 aa9.07□□□□□ -0.96
SYNE2-226ENST00000557084 SLIRPQ9GZT3 109 aaKnown RBP9.07□□□□□ -0.96
SYNE2-226ENST00000557084 TUBA4BQ9H853 241 aa9.07□□□□□ -0.96
SYNE2-226ENST00000557084 PLEKHA3Q9HB20 300 aa9.07□□□□□ -0.96
SYNE2-226ENST00000557084 PALMDQ9NP74 551 aa9.07□□□□□ -0.96
SYNE2-226ENST00000557084 KLK9Q9UKQ9 250 aa9.07□□□□□ -0.96
SYNE2-226ENST00000557084 F11RQ9Y624 299 aaKnown RBP9.07□□□□□ -0.96
SYNE2-226ENST00000557084 IGHV3-21A0A0B4J1V1 117 aa9.06□□□□□ -0.96
SYNE2-226ENST00000557084 OR2T8A6NH00 312 aa9.06□□□□□ -0.96
SYNE2-226ENST00000557084 C2orf70A6NJV1 201 aa9.06□□□□□ -0.96
SYNE2-226ENST00000557084 DBX1A6NMT0 343 aa9.06□□□□□ -0.96
SYNE2-226ENST00000557084 IFNA17P01571 189 aa9.06□□□□□ -0.96
SYNE2-226ENST00000557084 IGKV1-39P01597 117 aa9.06□□□□□ -0.96
SYNE2-226ENST00000557084 IGKV1D-39P04432 117 aa9.06□□□□□ -0.96
SYNE2-226ENST00000557084 FRMD6-AS1P0C7T7 363 aa9.06□□□□□ -0.96
SYNE2-226ENST00000557084 TNFSF8P32971 234 aa9.06□□□□□ -0.96
SYNE2-226ENST00000557084 S100A5P33763 92 aa9.06□□□□□ -0.96
SYNE2-226ENST00000557084 HSPE1P61604 102 aaKnown RBP9.06□□□□□ -0.96
SYNE2-226ENST00000557084 ERHP84090 104 aaKnown RBP9.06□□□□□ -0.96
SYNE2-226ENST00000557084 GUCA2BQ16661 112 aa9.06□□□□□ -0.96
SYNE2-226ENST00000557084 SP6Q3SY56 376 aa9.06□□□□□ -0.96
SYNE2-226ENST00000557084 CD300EQ496F6 205 aaPredicted RBP9.06□□□□□ -0.96
SYNE2-226ENST00000557084 Q56UQ5 140 aa9.06□□□□□ -0.96
SYNE2-226ENST00000557084 SLC35G3Q8N808 338 aa9.06□□□□□ -0.96
SYNE2-226ENST00000557084 OR1P1Q8NH06 330 aa9.06□□□□□ -0.96
SYNE2-226ENST00000557084 MISP3Q96FF7 219 aa9.06□□□□□ -0.96
SYNE2-226ENST00000557084 TP53RKQ96S44 253 aa9.06□□□□□ -0.96
SYNE2-226ENST00000557084 ENY2Q9NPA8 101 aa9.06□□□□□ -0.96
SYNE2-226ENST00000557084 MCUBQ9NWR8 336 aa9.06□□□□□ -0.96
SYNE2-226ENST00000557084 C21orf62Q9NYP8 219 aa9.06□□□□□ -0.96
SYNE2-226ENST00000557084 TECRQ9NZ01 308 aaKnown RBP9.06□□□□□ -0.96
SYNE2-226ENST00000557084 SCP2D1Q9UJQ7 156 aa9.06□□□□□ -0.96
SYNE2-226ENST00000557084 CEPT1Q9Y6K0 416 aa9.06□□□□□ -0.96
SYNE2-226ENST00000557084 IGHV3-35A0A0C4DH35 117 aa9.05□□□□□ -0.96
SYNE2-226ENST00000557084 TGOLN2O43493 480 aa9.05□□□□□ -0.96
SYNE2-226ENST00000557084 GSTZ1O43708 216 aaPredicted RBP9.05□□□□□ -0.96
SYNE2-226ENST00000557084 IGHV4-30-4P0DP06 118 aa9.05□□□□□ -0.96
SYNE2-226ENST00000557084 CBLN1P23435 193 aa9.05□□□□□ -0.96
SYNE2-226ENST00000557084 SNCAP37840 140 aa9.05□□□□□ -0.96
SYNE2-226ENST00000557084 PRCDQ00LT1 54 aa9.05□□□□□ -0.96
SYNE2-226ENST00000557084 SURF2Q15527 256 aaPredicted RBP9.05□□□□□ -0.96
SYNE2-226ENST00000557084 PYDC2Q56P42 97 aa9.05□□□□□ -0.96
SYNE2-226ENST00000557084 OR51S1Q8NGJ8 323 aa9.05□□□□□ -0.96
SYNE2-226ENST00000557084 OR4C16Q8NGL9 310 aa9.05□□□□□ -0.96
SYNE2-226ENST00000557084 BSCL2Q96G97 398 aaPredicted RBP9.05□□□□□ -0.96
SYNE2-226ENST00000557084 WWC2-AS2Q96NR7 200 aa9.05□□□□□ -0.96
SYNE2-226ENST00000557084 SCGB3A2Q96PL1 93 aa9.05□□□□□ -0.96
SYNE2-226ENST00000557084 ZMAT4Q9H898 229 aa9.05□□□□□ -0.96
SYNE2-226ENST00000557084 GAR1Q9NY12 217 aaKnown RBP9.05□□□□□ -0.96
SYNE2-226ENST00000557084 SLC2A8Q9NY64 477 aa9.05□□□□□ -0.96
SYNE2-226ENST00000557084 UFC1Q9Y3C8 167 aa9.05□□□□□ -0.96
SYNE2-226ENST00000557084 DMRT1Q9Y5R6 373 aa9.05□□□□□ -0.96
SYNE2-226ENST00000557084 ANKRD20A5PA0PJZ0 165 aa9.04□□□□□ -0.96
SYNE2-226ENST00000557084 IZUMO1RA6ND01 250 aa9.04□□□□□ -0.96
SYNE2-226ENST00000557084 IGKV1-5P01602 117 aa9.04□□□□□ -0.96
SYNE2-226ENST00000557084 FAUP35544 74 aaKnown RBP9.04□□□□□ -0.96
SYNE2-226ENST00000557084 HOXA1P49639 335 aaPredicted RBP9.04□□□□□ -0.96
SYNE2-226ENST00000557084 AP3S2P59780 193 aa9.04□□□□□ -0.96
SYNE2-226ENST00000557084 CD81P60033 236 aa9.04□□□□□ -0.96
SYNE2-226ENST00000557084 IZUMO4Q1ZYL8 232 aa9.04□□□□□ -0.96
SYNE2-226ENST00000557084 DEFB114Q30KQ6 69 aa9.04□□□□□ -0.96
SYNE2-226ENST00000557084 SPINK9Q5DT21 86 aa9.04□□□□□ -0.96
SYNE2-226ENST00000557084 ZNF57Q68EA5 555 aaPredicted RBP9.04□□□□□ -0.96
SYNE2-226ENST00000557084 SPSB3Q6PJ21 355 aa9.04□□□□□ -0.96
SYNE2-226ENST00000557084 SBSPONQ8IVN8 264 aa9.04□□□□□ -0.96
SYNE2-226ENST00000557084 OR2C3Q8N628 320 aa9.04□□□□□ -0.96
SYNE2-226ENST00000557084 UXS1Q8NBZ7 420 aa9.04□□□□□ -0.96
SYNE2-226ENST00000557084 SCARB1Q8WTV0 552 aa9.04□□□□□ -0.96
SYNE2-226ENST00000557084 MARC2Q969Z3 335 aa9.04□□□□□ -0.96
SYNE2-226ENST00000557084 PINX1Q96BK5 328 aaKnown RBP9.04□□□□□ -0.96
SYNE2-226ENST00000557084 THAP7Q9BT49 309 aaPredicted RBP9.04□□□□□ -0.96
SYNE2-226ENST00000557084 TMEM222Q9H0R3 208 aa9.04□□□□□ -0.96
SYNE2-226ENST00000557084 A8MWP6 167 aa9.03□□□□□ -0.96
SYNE2-226ENST00000557084 NUPL2O15504 423 aaKnown RBP9.03□□□□□ -0.96
SYNE2-226ENST00000557084 OR5AC1P0C628 307 aa9.03□□□□□ -0.96
SYNE2-226ENST00000557084 UCP1P25874 307 aa9.03□□□□□ -0.96
SYNE2-226ENST00000557084 SUB1P53999 127 aaKnown RBP eCLIP9.03□□□□□ -0.96
SYNE2-226ENST00000557084 MFAP2P55001 183 aa9.03□□□□□ -0.96
SYNE2-226ENST00000557084 MFAP4P55083 255 aa9.03□□□□□ -0.96
SYNE2-226ENST00000557084 DHODHQ02127 395 aa9.03□□□□□ -0.96
SYNE2-226ENST00000557084 TM4SF20Q53R12 229 aa9.03□□□□□ -0.96
SYNE2-226ENST00000557084 LCE2CQ5TA81 110 aa9.03□□□□□ -0.96
SYNE2-226ENST00000557084 ADAMTSL5Q6ZMM2 481 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms