RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 SRSF12Q8WXF0 261 aaKnown RBP8.65□□□□□ -1.02
PABPN1-203ENST00000553960 WDR83OSQ9Y284 106 aa8.65□□□□□ -1.02
PABPN1-203ENST00000553960 CSMD2Q7Z408 3487 aa8.65□□□□□ -1.03
PABPN1-203ENST00000553960 NOTCH2Q04721 2471 aa8.64□□□□□ -1.03
PABPN1-203ENST00000553960 LINC00862A6NCI5 91 aa8.64□□□□□ -1.03
PABPN1-203ENST00000553960 NUDT19A8MXV4 375 aa8.64□□□□□ -1.03
PABPN1-203ENST00000553960 E7EUB6 86 aa8.64□□□□□ -1.03
PABPN1-203ENST00000553960 CST7O76096 145 aa8.64□□□□□ -1.03
PABPN1-203ENST00000553960 IFNA5P01569 189 aa8.64□□□□□ -1.03
PABPN1-203ENST00000553960 METTL15P1P0C7V9 234 aa8.64□□□□□ -1.03
PABPN1-203ENST00000553960 IAPPP10997 89 aa8.64□□□□□ -1.03
PABPN1-203ENST00000553960 TMEM11P17152 192 aa8.64□□□□□ -1.03
PABPN1-203ENST00000553960 CTRB1P17538 263 aa8.64□□□□□ -1.03
PABPN1-203ENST00000553960 FCGR2BP31994 310 aaPredicted RBP8.64□□□□□ -1.03
PABPN1-203ENST00000553960 HOXA1P49639 335 aaPredicted RBP8.64□□□□□ -1.03
PABPN1-203ENST00000553960 SLC38A11Q08AI6 406 aa8.64□□□□□ -1.03
PABPN1-203ENST00000553960 PJVKQ0ZLH3 352 aa8.64□□□□□ -1.03
PABPN1-203ENST00000553960 AKIRIN2Q53H80 203 aa8.64□□□□□ -1.03
PABPN1-203ENST00000553960 C19orf54Q5BKX5 351 aa8.64□□□□□ -1.03
PABPN1-203ENST00000553960 CTRB2Q6GPI1 263 aa8.64□□□□□ -1.03
PABPN1-203ENST00000553960 ETV3LQ6ZN32 361 aa8.64□□□□□ -1.03
PABPN1-203ENST00000553960 TTC9CQ8N5M4 171 aa8.64□□□□□ -1.03
PABPN1-203ENST00000553960 C5orf56Q8N8D9 126 aa8.64□□□□□ -1.03
PABPN1-203ENST00000553960 RNF141Q8WVD5 230 aa8.64□□□□□ -1.03
PABPN1-203ENST00000553960 ZNF48Q96MX3 618 aaPredicted RBP8.64□□□□□ -1.03
PABPN1-203ENST00000553960 WDR61Q9GZS3 305 aaKnown RBP8.64□□□□□ -1.03
PABPN1-203ENST00000553960 FBXL15Q9H469 300 aa8.64□□□□□ -1.03
PABPN1-203ENST00000553960 NPVFQ9HCQ7 196 aa8.64□□□□□ -1.03
PABPN1-203ENST00000553960 ZC4H2Q9NQZ6 224 aa8.64□□□□□ -1.03
PABPN1-203ENST00000553960 UQCC1Q9NVA1 299 aa8.64□□□□□ -1.03
PABPN1-203ENST00000553960 MOB4Q9Y3A3 225 aa8.64□□□□□ -1.03
PABPN1-203ENST00000553960 FAM96BQ9Y3D0 163 aa8.64□□□□□ -1.03
PABPN1-203ENST00000553960 F11RQ9Y624 299 aaKnown RBP8.64□□□□□ -1.03
PABPN1-203ENST00000553960 TLN2Q9Y4G6 2542 aa8.63□□□□□ -1.03
PABPN1-203ENST00000553960 TRAV1-1A0A0B4J248 108 aa8.63□□□□□ -1.03
PABPN1-203ENST00000553960 A0A0U1RQK1 487 aa8.63□□□□□ -1.03
PABPN1-203ENST00000553960 KCNAB3O43448 404 aa8.63□□□□□ -1.03
PABPN1-203ENST00000553960 NDUFS6O75380 124 aaKnown RBP8.63□□□□□ -1.03
PABPN1-203ENST00000553960 CA2P00918 260 aa8.63□□□□□ -1.03
PABPN1-203ENST00000553960 IFNA10P01566 189 aa8.63□□□□□ -1.03
PABPN1-203ENST00000553960 IGF1P05019 195 aa8.63□□□□□ -1.03
PABPN1-203ENST00000553960 NMBP08949 121 aa8.63□□□□□ -1.03
PABPN1-203ENST00000553960 CNTFRP26992 372 aa8.63□□□□□ -1.03
PABPN1-203ENST00000553960 SNCAP37840 140 aa8.63□□□□□ -1.03
PABPN1-203ENST00000553960 CX3CL1P78423 397 aa8.63□□□□□ -1.03
PABPN1-203ENST00000553960 CD69Q07108 199 aa8.63□□□□□ -1.03
PABPN1-203ENST00000553960 HIST2H2BCQ6DN03 193 aa8.63□□□□□ -1.03
PABPN1-203ENST00000553960 ETFRF1Q6IPR1 90 aa8.63□□□□□ -1.03
PABPN1-203ENST00000553960 TMEM144Q7Z5S9 345 aa8.63□□□□□ -1.03
PABPN1-203ENST00000553960 EIF4E3Q8N5X7 224 aaKnown RBP8.63□□□□□ -1.03
PABPN1-203ENST00000553960 TMEM116Q8NCL8 245 aa8.63□□□□□ -1.03
PABPN1-203ENST00000553960 SGMS2Q8NHU3 365 aa8.63□□□□□ -1.03
PABPN1-203ENST00000553960 TAF15Q92804 592 aaKnown RBP eCLIP8.63□□□□□ -1.03
PABPN1-203ENST00000553960 BSCL2Q96G97 398 aaPredicted RBP8.63□□□□□ -1.03
PABPN1-203ENST00000553960 P2RX4Q99571 388 aa8.63□□□□□ -1.03
PABPN1-203ENST00000553960 TPSG1Q9NRR2 321 aa8.63□□□□□ -1.03
PABPN1-203ENST00000553960 KCNIP2Q9NS61 270 aa8.63□□□□□ -1.03
PABPN1-203ENST00000553960 IGHV7-81A0A0B4J1V7 117 aa8.62□□□□□ -1.03
PABPN1-203ENST00000553960 FCN1O00602 326 aa8.62□□□□□ -1.03
PABPN1-203ENST00000553960 CYB5BO43169 146 aa8.62□□□□□ -1.03
PABPN1-203ENST00000553960 IGHG2P01859 326 aa8.62□□□□□ -1.03
PABPN1-203ENST00000553960 AMY1AP04745 511 aa8.62□□□□□ -1.03
PABPN1-203ENST00000553960 EGR2P11161 476 aaPredicted RBP8.62□□□□□ -1.03
PABPN1-203ENST00000553960 IER3P46695 156 aa8.62□□□□□ -1.03
PABPN1-203ENST00000553960 RPL15P61313 204 aaKnown RBP8.62□□□□□ -1.03
PABPN1-203ENST00000553960 PRB3Q04118 309 aaPredicted RBP8.62□□□□□ -1.03
PABPN1-203ENST00000553960 SCGB2A2Q13296 93 aa8.62□□□□□ -1.03
PABPN1-203ENST00000553960 FXYD3Q14802 87 aa8.62□□□□□ -1.03
PABPN1-203ENST00000553960 Q6YL49 198 aa8.62□□□□□ -1.03
PABPN1-203ENST00000553960 SSX3Q99909 188 aa8.62□□□□□ -1.03
PABPN1-203ENST00000553960 NBPF19A0A087WUL8 3843 aa8.62□□□□□ -1.03
PABPN1-203ENST00000553960 MXRA5Q9NR99 2828 aa8.62□□□□□ -1.03
PABPN1-203ENST00000553960 H3BP45 60 aa8.61□□□□□ -1.03
PABPN1-203ENST00000553960 H3BUA1 57 aa8.61□□□□□ -1.03
PABPN1-203ENST00000553960 CLDN34H7C241 214 aa8.61□□□□□ -1.03
PABPN1-203ENST00000553960 MBP02144 154 aa8.61□□□□□ -1.03
PABPN1-203ENST00000553960 OR13C7P0DN81 318 aa8.61□□□□□ -1.03
PABPN1-203ENST00000553960 HIST1H1BP16401 226 aaKnown RBP8.61□□□□□ -1.03
PABPN1-203ENST00000553960 ATP6V0CP27449 155 aa8.61□□□□□ -1.03
PABPN1-203ENST00000553960 RPL29P47914 159 aaKnown RBP8.61□□□□□ -1.03
PABPN1-203ENST00000553960 RAB14P61106 215 aa8.61□□□□□ -1.03
PABPN1-203ENST00000553960 BLOC1S1P78537 153 aa8.61□□□□□ -1.03
PABPN1-203ENST00000553960 HES1Q14469 280 aa8.61□□□□□ -1.03
PABPN1-203ENST00000553960 TNXAQ16473 311 aa8.61□□□□□ -1.03
PABPN1-203ENST00000553960 TREML4Q6UXN2 200 aa8.61□□□□□ -1.03
PABPN1-203ENST00000553960 COMMD1Q8N668 190 aa8.61□□□□□ -1.03
PABPN1-203ENST00000553960 TMEM217Q8N7C4 229 aa8.61□□□□□ -1.03
PABPN1-203ENST00000553960 THAP8Q8NA92 274 aa8.61□□□□□ -1.03
PABPN1-203ENST00000553960 OR10W1Q8NGF6 305 aa8.61□□□□□ -1.03
PABPN1-203ENST00000553960 SSMEM1Q8WWF3 244 aa8.61□□□□□ -1.03
PABPN1-203ENST00000553960 ARPC1AQ92747 370 aa8.61□□□□□ -1.03
PABPN1-203ENST00000553960 RASL11BQ9BPW5 248 aa8.61□□□□□ -1.03
PABPN1-203ENST00000553960 C19orf24Q9BVV8 132 aa8.61□□□□□ -1.03
PABPN1-203ENST00000553960 PARP11Q9NR21 331 aa8.61□□□□□ -1.03
PABPN1-203ENST00000553960 VPS13CQ709C8 3753 aa8.6□□□□□ -1.03
PABPN1-203ENST00000553960 TRBV9A0A0B4J1U6 114 aa8.6□□□□□ -1.03
PABPN1-203ENST00000553960 TMEM89A2RUT3 159 aa8.6□□□□□ -1.03
PABPN1-203ENST00000553960 BTBD17A6NE02 478 aa8.6□□□□□ -1.03
PABPN1-203ENST00000553960 FBXO24O75426 580 aa8.6□□□□□ -1.03
PABPN1-203ENST00000553960 IFNA4P05014 189 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms