RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 SCARB1Q8WTV0 552 aa5.01□□□□□ -1.61
PRPF40B-214ENST00000551320 TMEM190Q8WZ59 177 aa5.01□□□□□ -1.61
PRPF40B-214ENST00000551320 SLC25A38Q96DW6 304 aa5.01□□□□□ -1.61
PRPF40B-214ENST00000551320 HSD17B10Q99714 261 aaKnown RBP5.01□□□□□ -1.61
PRPF40B-214ENST00000551320 MAP6D1Q9H9H5 199 aa5.01□□□□□ -1.61
PRPF40B-214ENST00000551320 TMEM140Q9NV12 185 aa5.01□□□□□ -1.61
PRPF40B-214ENST00000551320 TXNL4BQ9NX01 149 aaKnown RBP5.01□□□□□ -1.61
PRPF40B-214ENST00000551320 NDUFB11Q9NX14 153 aa5.01□□□□□ -1.61
PRPF40B-214ENST00000551320 TRBV7-1A0A0A6YYK4 115 aa5□□□□□ -1.61
PRPF40B-214ENST00000551320 TRDV1A0A1B0GX56 115 aa5□□□□□ -1.61
PRPF40B-214ENST00000551320 IGLL5B9A064 214 aa5□□□□□ -1.61
PRPF40B-214ENST00000551320 K7EIM0 57 aa5□□□□□ -1.61
PRPF40B-214ENST00000551320 M0R2N4 97 aa5□□□□□ -1.61
PRPF40B-214ENST00000551320 YIF1AO95070 293 aa5□□□□□ -1.61
PRPF40B-214ENST00000551320 KRASP01116 189 aa5□□□□□ -1.61
PRPF40B-214ENST00000551320 PPYP01298 95 aa5□□□□□ -1.61
PRPF40B-214ENST00000551320 PMP2P02689 132 aa5□□□□□ -1.61
PRPF40B-214ENST00000551320 RLN1P04808 185 aa5□□□□□ -1.61
PRPF40B-214ENST00000551320 DTYMKP23919 212 aa5□□□□□ -1.61
PRPF40B-214ENST00000551320 SDC2P34741 201 aa5□□□□□ -1.61
PRPF40B-214ENST00000551320 BMI1P35226 326 aa5□□□□□ -1.61
PRPF40B-214ENST00000551320 LPAR6P43657 344 aa5□□□□□ -1.61
PRPF40B-214ENST00000551320 HSPA13P48723 471 aa5□□□□□ -1.61
PRPF40B-214ENST00000551320 TRAM1Q15629 374 aa5□□□□□ -1.61
PRPF40B-214ENST00000551320 Q56UQ5 140 aa5□□□□□ -1.61
PRPF40B-214ENST00000551320 FAM209BQ5JX69 171 aa5□□□□□ -1.61
PRPF40B-214ENST00000551320 IDNKQ5T6J7 187 aa5□□□□□ -1.61
PRPF40B-214ENST00000551320 AADACL3Q5VUY0 350 aa5□□□□□ -1.61
PRPF40B-214ENST00000551320 IZUMO2Q6UXV1 221 aa5□□□□□ -1.61
PRPF40B-214ENST00000551320 Q6ZS49 121 aa5□□□□□ -1.61
PRPF40B-214ENST00000551320 ZNF367Q7RTV3 350 aa5□□□□□ -1.61
PRPF40B-214ENST00000551320 OR11H2Q8NH07 326 aa5□□□□□ -1.61
PRPF40B-214ENST00000551320 C20orf173Q96LM9 149 aa5□□□□□ -1.61
PRPF40B-214ENST00000551320 RARRES2Q99969 163 aa5□□□□□ -1.61
PRPF40B-214ENST00000551320 KRTAP9-2Q9BYQ4 174 aa5□□□□□ -1.61
PRPF40B-214ENST00000551320 KRTAP4-5Q9BYR2 181 aa5□□□□□ -1.61
PRPF40B-214ENST00000551320 ZNF436Q9C0F3 470 aaPredicted RBP5□□□□□ -1.61
PRPF40B-214ENST00000551320 COMMD5Q9GZQ3 224 aa5□□□□□ -1.61
PRPF40B-214ENST00000551320 C8orf4Q9NR00 106 aa5□□□□□ -1.61
PRPF40B-214ENST00000551320 RHBDL2Q9NX52 303 aa5□□□□□ -1.61
PRPF40B-214ENST00000551320 CLEC5AQ9NY25 188 aa5□□□□□ -1.61
PRPF40B-214ENST00000551320 MRPL27Q9P0M9 148 aaKnown RBP5□□□□□ -1.61
PRPF40B-214ENST00000551320 UFC1Q9Y3C8 167 aa5□□□□□ -1.61
PRPF40B-214ENST00000551320 LOC100506127A0A0U1RQW1 187 aa4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 KNCNA6PVL3 124 aa4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 CHEK1O14757 476 aa4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 TSPAN4O14817 238 aa4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 CREBL2O60519 120 aaPredicted RBP4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 CA1P00915 261 aaPredicted RBP4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 HRASP01112 189 aa4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 SERPINE2P07093 398 aa4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 CTSGP08311 255 aa4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 TRAPPC2P0DI81 140 aa4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 TRAPPC2BP0DI82 140 aa4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 PSMA1P25786 263 aaKnown RBP4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 PTBP1P26599 531 aaKnown RBP eCLIP4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 GNRHRP30968 328 aa4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 APOC4P55056 127 aa4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 TBCEQ15813 527 aaPredicted RBP4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 ANKRD55Q3KP44 614 aa4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 PHLDA2Q53GA4 152 aa4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 SFXN4Q6P4A7 337 aa4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 ZNF66Q6ZN08 573 aa4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 Q6ZWC4 215 aa4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 SLC38A6Q8IZM9 456 aa4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 GDPD1Q8N9F7 314 aa4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 FCAMRQ8WWV6 532 aa4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 ST8SIA2Q92186 375 aa4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 SLC25A46Q96AG3 418 aa4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 PINX1Q96BK5 328 aaKnown RBP4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 SPAG8Q99932 426 aaPredicted RBP4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 RHPN1-AS1Q9BWJ2 59 aa4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 QTRT1Q9BXR0 403 aaKnown RBP4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 VCXQ9H320 206 aa4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 C5orf66Q9H5L9 145 aa4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 BET1LQ9NYM9 111 aa4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 C21orf62Q9NYP8 219 aa4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 SMPXQ9UHP9 88 aa4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 KLK5Q9Y337 293 aaPredicted RBP4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 OR51B2Q9Y5P1 312 aa4.99□□□□□ -1.61
PRPF40B-214ENST00000551320 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.98□□□□□ -1.61
PRPF40B-214ENST00000551320 NUPL2O15504 423 aaKnown RBP4.98□□□□□ -1.61
PRPF40B-214ENST00000551320 PGLYRP1O75594 196 aaPredicted RBP4.98□□□□□ -1.61
PRPF40B-214ENST00000551320 DIRAS3O95661 229 aa4.98□□□□□ -1.61
PRPF40B-214ENST00000551320 DHFRP00374 187 aa4.98□□□□□ -1.61
PRPF40B-214ENST00000551320 RBMY1A1P0DJD3 496 aaKnown RBP4.98□□□□□ -1.61
PRPF40B-214ENST00000551320 RBMY1CP0DJD4 496 aa4.98□□□□□ -1.61
PRPF40B-214ENST00000551320 NQO2P16083 231 aa4.98□□□□□ -1.61
PRPF40B-214ENST00000551320 HIST1H1BP16401 226 aaKnown RBP4.98□□□□□ -1.61
PRPF40B-214ENST00000551320 MAS1LP35410 378 aa4.98□□□□□ -1.61
PRPF40B-214ENST00000551320 DEFB131AP59861 70 aa4.98□□□□□ -1.61
PRPF40B-214ENST00000551320 DEFB1P60022 68 aa4.98□□□□□ -1.61
PRPF40B-214ENST00000551320 RBMY1FQ15415 496 aaKnown RBP4.98□□□□□ -1.61
PRPF40B-214ENST00000551320 RBMS2Q15434 407 aaKnown RBP4.98□□□□□ -1.61
PRPF40B-214ENST00000551320 RNASE12Q5GAN4 147 aaKnown RBP4.98□□□□□ -1.61
PRPF40B-214ENST00000551320 HOGA1Q86XE5 327 aa4.98□□□□□ -1.61
PRPF40B-214ENST00000551320 SPARTQ8N0X7 666 aa4.98□□□□□ -1.61
PRPF40B-214ENST00000551320 VSTM2AQ8TAG5 236 aa4.98□□□□□ -1.61
PRPF40B-214ENST00000551320 C11orf45Q8TAV5 145 aa4.98□□□□□ -1.61
PRPF40B-214ENST00000551320 CXorf58Q96LI9 332 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms