RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 SNX12Q9UMY4 172 aa0.69□□□□□ -2.3
YBX3-214ENST00000544501 POFUT2Q9Y2G5 429 aa0.69□□□□□ -2.3
YBX3-214ENST00000544501 ABCA1O95477 2261 aa0.69□□□□□ -2.3
YBX3-214ENST00000544501 POLEQ07864 2286 aa0.69□□□□□ -2.3
YBX3-214ENST00000544501 DIDO1Q9BTC0 2240 aaKnown RBP0.69□□□□□ -2.3
YBX3-214ENST00000544501 ROS1P08922 2347 aa0.69□□□□□ -2.3
YBX3-214ENST00000544501 HELZP42694 1942 aaKnown RBP0.68□□□□□ -2.3
YBX3-214ENST00000544501 DNAH17Q9UFH2 4485 aa0.68□□□□□ -2.3
YBX3-214ENST00000544501 C2orf74A8MZ97 194 aa0.68□□□□□ -2.3
YBX3-214ENST00000544501 C9J4A7 227 aa0.68□□□□□ -2.3
YBX3-214ENST00000544501 F5H5K5 113 aa0.68□□□□□ -2.3
YBX3-214ENST00000544501 STK16O75716 305 aa0.68□□□□□ -2.3
YBX3-214ENST00000544501 IGLV3-27P01718 113 aa0.68□□□□□ -2.3
YBX3-214ENST00000544501 RD3LP0DJH9 198 aa0.68□□□□□ -2.3
YBX3-214ENST00000544501 ORM2P19652 201 aa0.68□□□□□ -2.3
YBX3-214ENST00000544501 ALOX5APP20292 161 aa0.68□□□□□ -2.3
YBX3-214ENST00000544501 CRHBPP24387 322 aa0.68□□□□□ -2.3
YBX3-214ENST00000544501 OR1E2P47887 323 aa0.68□□□□□ -2.3
YBX3-214ENST00000544501 PSMD7P51665 324 aa0.68□□□□□ -2.3
YBX3-214ENST00000544501 RAB8AP61006 207 aa0.68□□□□□ -2.3
YBX3-214ENST00000544501 SYCP1Q15431 976 aa0.68□□□□□ -2.3
YBX3-214ENST00000544501 USF2Q15853 346 aaPredicted RBP0.68□□□□□ -2.3
YBX3-214ENST00000544501 TPRXLQ17RH7 258 aa0.68□□□□□ -2.3
YBX3-214ENST00000544501 RBM48Q5RL73 367 aaKnown RBP0.68□□□□□ -2.3
YBX3-214ENST00000544501 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.68□□□□□ -2.3
YBX3-214ENST00000544501 AADACL4Q5VUY2 407 aa0.68□□□□□ -2.3
YBX3-214ENST00000544501 AGTRAPQ6RW13 159 aa0.68□□□□□ -2.3
YBX3-214ENST00000544501 COPS6Q7L5N1 327 aa0.68□□□□□ -2.3
YBX3-214ENST00000544501 SLC13A5Q86YT5 568 aaPredicted RBP0.68□□□□□ -2.3
YBX3-214ENST00000544501 AHNAK2Q8IVF2 5795 aa0.68□□□□□ -2.3
YBX3-214ENST00000544501 TMEM75Q8N9X5 138 aa0.68□□□□□ -2.3
YBX3-214ENST00000544501 LHFPL5Q8TAF8 219 aa0.68□□□□□ -2.3
YBX3-214ENST00000544501 CCDC12Q8WUD4 166 aaPredicted RBP0.68□□□□□ -2.3
YBX3-214ENST00000544501 TMIGD2Q96BF3 282 aa0.68□□□□□ -2.3
YBX3-214ENST00000544501 ABHD14BQ96IU4 210 aa0.68□□□□□ -2.3
YBX3-214ENST00000544501 TRNT1Q96Q11 434 aaKnown RBP0.68□□□□□ -2.3
YBX3-214ENST00000544501 CYTH2Q99418 400 aa0.68□□□□□ -2.3
YBX3-214ENST00000544501 TRPM6Q9BX84 2022 aa0.68□□□□□ -2.3
YBX3-214ENST00000544501 MED28Q9H204 178 aa0.68□□□□□ -2.3
YBX3-214ENST00000544501 ASCL3Q9NQ33 180 aa0.68□□□□□ -2.3
YBX3-214ENST00000544501 DNAH2Q9P225 4427 aa0.68□□□□□ -2.3
YBX3-214ENST00000544501 BAZ2BQ9UIF8 2168 aaKnown RBP0.68□□□□□ -2.3
YBX3-214ENST00000544501 DNAJC12Q9UKB3 198 aa0.68□□□□□ -2.3
YBX3-214ENST00000544501 SNX10Q9Y5X0 201 aa0.68□□□□□ -2.3
YBX3-214ENST00000544501 PUS1Q9Y606 427 aaKnown RBP eCLIP0.68□□□□□ -2.3
YBX3-214ENST00000544501 MCM3APO60318 1980 aa0.68□□□□□ -2.3
YBX3-214ENST00000544501 FOCADQ5VW36 1801 aa0.68□□□□□ -2.3
YBX3-214ENST00000544501 MACF1Q9UPN3 7388 aaKnown RBP0.68□□□□□ -2.3
YBX3-214ENST00000544501 MYLKQ15746 1914 aa0.68□□□□□ -2.3
YBX3-214ENST00000544501 PLXND1Q9Y4D7 1925 aa0.68□□□□□ -2.3
YBX3-214ENST00000544501 MUC12Q9UKN1 5478 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 VPS13BQ7Z7G8 4022 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 GOLGA8QA0A0J9YX86 632 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 LCE6AA0A183 80 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 C11orf86A6NJI1 115 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 SLC17A3O00476 420 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 PIN1P1O15428 100 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 GNRH2O43555 120 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 ASS1P00966 412 aaKnown RBP0.67□□□□□ -2.3
YBX3-214ENST00000544501 ANGP03950 147 aaKnown RBP0.67□□□□□ -2.3
YBX3-214ENST00000544501 ADORA1P30542 326 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 HINT1P49773 126 aaPredicted RBP0.67□□□□□ -2.3
YBX3-214ENST00000544501 DLX6P56179 175 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 TAS2R45P59539 299 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 ACTBP60709 375 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 ACTG1P63261 375 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 ZNF90Q03938 601 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 RELAQ04206 551 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 DMTNQ08495 405 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 TBC1D28Q2M2D7 210 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 SCGB1D4Q6XE38 83 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 Q6ZRN7 208 aaPredicted RBP0.67□□□□□ -2.3
YBX3-214ENST00000544501 Q6ZTI0 123 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 GLT6D1Q7Z4J2 308 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 PLCZ1Q86YW0 608 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 SLC35F6Q8N357 371 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 C17orf78Q8N4C9 275 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 C10orf126Q8N4M7 172 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 NATD1Q8N6N6 113 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 WFDC11Q8NEX6 87 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 OR4X2Q8NGF9 303 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 DYNC2LI1Q8TCX1 351 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 TNFAIP8L1Q8WVP5 186 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 ACY3Q96HD9 319 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 FAM210AQ96ND0 272 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 GNB1LQ9BYB4 327 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 EIF5A2Q9GZV4 153 aaKnown RBP0.67□□□□□ -2.3
YBX3-214ENST00000544501 GLS2Q9UI32 602 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 AMMECR1Q9Y4X0 333 aaPredicted RBP0.67□□□□□ -2.3
YBX3-214ENST00000544501 FAM215AQ9Y5M1 114 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 MYH7BA7E2Y1 1941 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 MUC5BQ9HC84 5762 aaPredicted RBP0.67□□□□□ -2.3
YBX3-214ENST00000544501 MUC4Q99102 2169 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 MDN1Q9NU22 5596 aa0.67□□□□□ -2.3
YBX3-214ENST00000544501 LRP1Q07954 4544 aaKnown RBP0.67□□□□□ -2.3
YBX3-214ENST00000544501 PDCD11Q14690 1871 aaKnown RBP0.67□□□□□ -2.3
YBX3-214ENST00000544501 FLG2Q5D862 2391 aaPredicted RBP0.67□□□□□ -2.3
YBX3-214ENST00000544501 PKD1P98161 4303 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 SMLR1H3BR10 107 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 J3QQQ9 107 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms