RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 TGFBR1P36897 503 aa9.82□□□□□ -0.84
RTN3-212ENST00000543123 RELQ04864 619 aaPredicted RBP9.82□□□□□ -0.84
RTN3-212ENST00000543123 PHLDA2Q53GA4 152 aa9.82□□□□□ -0.84
RTN3-212ENST00000543123 UBAC2Q8NBM4 344 aa9.82□□□□□ -0.84
RTN3-212ENST00000543123 GPX8Q8TED1 209 aa9.82□□□□□ -0.84
RTN3-212ENST00000543123 TMEM14BQ9NUH8 114 aa9.82□□□□□ -0.84
RTN3-212ENST00000543123 COMMD3Q9UBI1 195 aa9.82□□□□□ -0.84
RTN3-212ENST00000543123 OR4C46A6NHA9 309 aa9.81□□□□□ -0.84
RTN3-212ENST00000543123 TSPAN4O14817 238 aa9.81□□□□□ -0.84
RTN3-212ENST00000543123 Q56UQ5 140 aa9.81□□□□□ -0.84
RTN3-212ENST00000543123 H2BFWTQ7Z2G1 175 aa9.81□□□□□ -0.84
RTN3-212ENST00000543123 OR1P1Q8NH06 330 aa9.81□□□□□ -0.84
RTN3-212ENST00000543123 OR4A16Q8NH70 328 aa9.81□□□□□ -0.84
RTN3-212ENST00000543123 SCARB1Q8WTV0 552 aa9.81□□□□□ -0.84
RTN3-212ENST00000543123 C20orf24Q9BUV8 137 aa9.81□□□□□ -0.84
RTN3-212ENST00000543123 NSG2Q9Y328 171 aa9.81□□□□□ -0.84
RTN3-212ENST00000543123 SELENOKQ9Y6D0 94 aa9.81□□□□□ -0.84
RTN3-212ENST00000543123 C15orf62A8K5M9 175 aa9.8□□□□□ -0.84
RTN3-212ENST00000543123 K7EMT4 169 aa9.8□□□□□ -0.84
RTN3-212ENST00000543123 UBE2CO00762 179 aa9.8□□□□□ -0.84
RTN3-212ENST00000543123 NUPL2O15504 423 aaKnown RBP9.8□□□□□ -0.84
RTN3-212ENST00000543123 EIF4EP06730 217 aaKnown RBP9.8□□□□□ -0.84
RTN3-212ENST00000543123 UCP3P55916 312 aa9.8□□□□□ -0.84
RTN3-212ENST00000543123 TBC1D26Q86UD7 250 aa9.8□□□□□ -0.84
RTN3-212ENST00000543123 SNX29P2Q8IUI4 249 aa9.8□□□□□ -0.84
RTN3-212ENST00000543123 LYSMD2Q8IV50 215 aa9.8□□□□□ -0.84
RTN3-212ENST00000543123 AP3S1Q92572 193 aa9.8□□□□□ -0.84
RTN3-212ENST00000543123 C6orf62Q9GZU0 229 aaPredicted RBP9.8□□□□□ -0.84
RTN3-212ENST00000543123 TP53TG1Q9Y2A0 90 aa9.8□□□□□ -0.84
RTN3-212ENST00000543123 K7EIM0 57 aa9.79□□□□□ -0.84
RTN3-212ENST00000543123 ATG12O94817 140 aa9.79□□□□□ -0.84
RTN3-212ENST00000543123 BMI1P35226 326 aa9.79□□□□□ -0.84
RTN3-212ENST00000543123 MFAP4P55083 255 aa9.79□□□□□ -0.84
RTN3-212ENST00000543123 MZT2AQ6P582 158 aa9.79□□□□□ -0.84
RTN3-212ENST00000543123 Q6ZWC4 215 aa9.79□□□□□ -0.84
RTN3-212ENST00000543123 TXN2Q99757 166 aa9.79□□□□□ -0.84
RTN3-212ENST00000543123 FUNDC2Q9BWH2 189 aa9.79□□□□□ -0.84
RTN3-212ENST00000543123 IGHV3-21A0A0B4J1V1 117 aa9.78□□□□□ -0.84
RTN3-212ENST00000543123 KIR2DL5BA0A0G2JN68 375 aa9.78□□□□□ -0.84
RTN3-212ENST00000543123 KIR2DL5BA0A0G2JPC4 375 aa9.78□□□□□ -0.84
RTN3-212ENST00000543123 FCGR2BP31994 310 aaPredicted RBP9.78□□□□□ -0.84
RTN3-212ENST00000543123 RORCP51449 518 aa9.78□□□□□ -0.84
RTN3-212ENST00000543123 MFAP2P55001 183 aa9.78□□□□□ -0.84
RTN3-212ENST00000543123 CMC4P56277 68 aaPredicted RBP9.78□□□□□ -0.84
RTN3-212ENST00000543123 NCS1P62166 190 aa9.78□□□□□ -0.84
RTN3-212ENST00000543123 ERHP84090 104 aaKnown RBP9.78□□□□□ -0.84
RTN3-212ENST00000543123 PRCDQ00LT1 54 aa9.78□□□□□ -0.84
RTN3-212ENST00000543123 KIR2DL5AQ8N109 375 aa9.78□□□□□ -0.84
RTN3-212ENST00000543123 ZNF114Q8NC26 417 aa9.78□□□□□ -0.84
RTN3-212ENST00000543123 KIR2DL5BQ8NHK3 375 aa9.78□□□□□ -0.84
RTN3-212ENST00000543123 MISP3Q96FF7 219 aa9.78□□□□□ -0.84
RTN3-212ENST00000543123 ZNF486Q96H40 463 aaPredicted RBP9.78□□□□□ -0.84
RTN3-212ENST00000543123 SEC22AQ96IW7 307 aa9.78□□□□□ -0.84
RTN3-212ENST00000543123 OVOL2Q9BRP0 275 aa9.78□□□□□ -0.84
RTN3-212ENST00000543123 CHRDL1Q9BU40 450 aa9.78□□□□□ -0.84
RTN3-212ENST00000543123 FAM25AB3EWG3 89 aa9.77□□□□□ -0.85
RTN3-212ENST00000543123 FAM25CB3EWG5 89 aa9.77□□□□□ -0.85
RTN3-212ENST00000543123 FAM25GB3EWG6 89 aa9.77□□□□□ -0.85
RTN3-212ENST00000543123 YIF1AO95070 293 aa9.77□□□□□ -0.85
RTN3-212ENST00000543123 CD5P06127 495 aa9.77□□□□□ -0.85
RTN3-212ENST00000543123 TBPP20226 339 aa9.77□□□□□ -0.85
RTN3-212ENST00000543123 ADMP35318 185 aa9.77□□□□□ -0.85
RTN3-212ENST00000543123 VBP1P61758 197 aa9.77□□□□□ -0.85
RTN3-212ENST00000543123 RNASE10Q5GAN6 216 aaKnown RBP9.77□□□□□ -0.85
RTN3-212ENST00000543123 WFDC3Q8IUB2 231 aa9.77□□□□□ -0.85
RTN3-212ENST00000543123 TMEM217Q8N7C4 229 aa9.77□□□□□ -0.85
RTN3-212ENST00000543123 STPG3Q8N7X2 389 aa9.77□□□□□ -0.85
RTN3-212ENST00000543123 C15orf40Q8WUR7 153 aa9.77□□□□□ -0.85
RTN3-212ENST00000543123 MRGPRFQ96AM1 343 aa9.77□□□□□ -0.85
RTN3-212ENST00000543123 GINS3Q9BRX5 216 aa9.77□□□□□ -0.85
RTN3-212ENST00000543123 DBX1A6NMT0 343 aa9.76□□□□□ -0.85
RTN3-212ENST00000543123 F8W735 103 aaPredicted RBP9.76□□□□□ -0.85
RTN3-212ENST00000543123 SPRY2O43597 315 aa9.76□□□□□ -0.85
RTN3-212ENST00000543123 GNG7O60262 68 aa9.76□□□□□ -0.85
RTN3-212ENST00000543123 HPGDSO60760 199 aa9.76□□□□□ -0.85
RTN3-212ENST00000543123 CTSGP08311 255 aa9.76□□□□□ -0.85
RTN3-212ENST00000543123 PGAM2P15259 253 aa9.76□□□□□ -0.85
RTN3-212ENST00000543123 ELK1P19419 428 aa9.76□□□□□ -0.85
RTN3-212ENST00000543123 AKR1C2P52895 323 aa9.76□□□□□ -0.85
RTN3-212ENST00000543123 RND3P61587 244 aa9.76□□□□□ -0.85
RTN3-212ENST00000543123 HSPE1P61604 102 aaKnown RBP9.76□□□□□ -0.85
RTN3-212ENST00000543123 DMRTA1Q5VZB9 504 aa9.76□□□□□ -0.85
RTN3-212ENST00000543123 ARRDC1Q8N5I2 433 aa9.76□□□□□ -0.85
RTN3-212ENST00000543123 TMEM116Q8NCL8 245 aa9.76□□□□□ -0.85
RTN3-212ENST00000543123 GALNT14Q96FL9 552 aa9.76□□□□□ -0.85
RTN3-212ENST00000543123 PDCD10Q9BUL8 212 aa9.76□□□□□ -0.85
RTN3-212ENST00000543123 UBQLN2Q9UHD9 624 aa9.76□□□□□ -0.85
RTN3-212ENST00000543123 SMPXQ9UHP9 88 aa9.76□□□□□ -0.85
RTN3-212ENST00000543123 ALMS1Q8TCU4 4167 aa9.75□□□□□ -0.85
RTN3-212ENST00000543123 IGHV3OR16-8A0A075B7F1 116 aa9.75□□□□□ -0.85
RTN3-212ENST00000543123 IGHV7-4-1A0A0J9YVY3 117 aa9.75□□□□□ -0.85
RTN3-212ENST00000543123 CXorf65A6NEN9 183 aa9.75□□□□□ -0.85
RTN3-212ENST00000543123 NUPR2A6NF83 97 aa9.75□□□□□ -0.85
RTN3-212ENST00000543123 I3L2K1 104 aa9.75□□□□□ -0.85
RTN3-212ENST00000543123 M0QYG6 137 aa9.75□□□□□ -0.85
RTN3-212ENST00000543123 CORTO00230 105 aa9.75□□□□□ -0.85
RTN3-212ENST00000543123 ZNF207O43670 478 aaKnown RBP9.75□□□□□ -0.85
RTN3-212ENST00000543123 SCGB2A1O75556 95 aa9.75□□□□□ -0.85
RTN3-212ENST00000543123 MT-CO2P00403 227 aa9.75□□□□□ -0.85
RTN3-212ENST00000543123 CTSDP07339 412 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms