RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 GIPP09681 153 aaPredicted RBP7.33□□□□□ -1.24
DDX55-208ENST00000541259 OR13C7P0DN81 318 aa7.33□□□□□ -1.24
DDX55-208ENST00000541259 PSMB6P28072 239 aa7.33□□□□□ -1.24
DDX55-208ENST00000541259 HOXA1P49639 335 aaPredicted RBP7.33□□□□□ -1.24
DDX55-208ENST00000541259 PAX9P55771 341 aa7.33□□□□□ -1.24
DDX55-208ENST00000541259 CYCSP99999 105 aaKnown RBP7.33□□□□□ -1.24
DDX55-208ENST00000541259 C19orf54Q5BKX5 351 aa7.33□□□□□ -1.24
DDX55-208ENST00000541259 UNQ5815/PRO19632Q6UWF5 114 aa7.33□□□□□ -1.24
DDX55-208ENST00000541259 C10orf99Q6UWK7 81 aa7.33□□□□□ -1.24
DDX55-208ENST00000541259 OR5T1Q8NG75 326 aa7.33□□□□□ -1.24
DDX55-208ENST00000541259 DTD1Q8TEA8 209 aa7.33□□□□□ -1.24
DDX55-208ENST00000541259 RNF126Q9BV68 326 aa7.33□□□□□ -1.24
DDX55-208ENST00000541259 C11orf1Q9H5F2 150 aa7.33□□□□□ -1.24
DDX55-208ENST00000541259 PLEKHA3Q9HB20 300 aa7.33□□□□□ -1.24
DDX55-208ENST00000541259 HEYLQ9NQ87 328 aaPredicted RBP7.33□□□□□ -1.24
DDX55-208ENST00000541259 SERTAD4Q9NUC0 356 aa7.33□□□□□ -1.24
DDX55-208ENST00000541259 OR5AC2Q9NZP5 309 aa7.33□□□□□ -1.24
DDX55-208ENST00000541259 TRAV41A0A0B4J266 112 aa7.32□□□□□ -1.24
DDX55-208ENST00000541259 KCNAB3O43448 404 aa7.32□□□□□ -1.24
DDX55-208ENST00000541259 MED6O75586 246 aa7.32□□□□□ -1.24
DDX55-208ENST00000541259 MPC2O95563 127 aa7.32□□□□□ -1.24
DDX55-208ENST00000541259 PRH1P02810 166 aa7.32□□□□□ -1.24
DDX55-208ENST00000541259 ATF4P18848 351 aaPredicted RBP7.32□□□□□ -1.24
DDX55-208ENST00000541259 CRIP2P52943 208 aaPredicted RBP7.32□□□□□ -1.24
DDX55-208ENST00000541259 MFAP2P55001 183 aa7.32□□□□□ -1.24
DDX55-208ENST00000541259 RAP2BP61225 183 aa7.32□□□□□ -1.24
DDX55-208ENST00000541259 RPL15P61313 204 aaKnown RBP7.32□□□□□ -1.24
DDX55-208ENST00000541259 AKIRIN2Q53H80 203 aa7.32□□□□□ -1.24
DDX55-208ENST00000541259 LURAP1LQ8IV03 231 aa7.32□□□□□ -1.24
DDX55-208ENST00000541259 MRPL41Q8IXM3 137 aaKnown RBP7.32□□□□□ -1.24
DDX55-208ENST00000541259 STPG2Q8N412 459 aa7.32□□□□□ -1.24
DDX55-208ENST00000541259 TTC9CQ8N5M4 171 aa7.32□□□□□ -1.24
DDX55-208ENST00000541259 OR2C3Q8N628 320 aa7.32□□□□□ -1.24
DDX55-208ENST00000541259 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.32□□□□□ -1.24
DDX55-208ENST00000541259 TMEM170AQ8WVE7 144 aa7.32□□□□□ -1.24
DDX55-208ENST00000541259 NEURL2Q9BR09 285 aa7.32□□□□□ -1.24
DDX55-208ENST00000541259 C16orf95Q9H693 158 aa7.32□□□□□ -1.24
DDX55-208ENST00000541259 ENY2Q9NPA8 101 aa7.32□□□□□ -1.24
DDX55-208ENST00000541259 DMRT1Q9Y5R6 373 aa7.32□□□□□ -1.24
DDX55-208ENST00000541259 A0A1W2PN81 502 aa7.31□□□□□ -1.24
DDX55-208ENST00000541259 INS-IGF2F8WCM5 200 aa7.31□□□□□ -1.24
DDX55-208ENST00000541259 H3BP45 60 aa7.31□□□□□ -1.24
DDX55-208ENST00000541259 AP4M1O00189 453 aa7.31□□□□□ -1.24
DDX55-208ENST00000541259 SOX15O60248 233 aa7.31□□□□□ -1.24
DDX55-208ENST00000541259 DEDDO75618 318 aa7.31□□□□□ -1.24
DDX55-208ENST00000541259 NDUFA7O95182 113 aa7.31□□□□□ -1.24
DDX55-208ENST00000541259 RNASE2P10153 161 aaKnown RBP7.31□□□□□ -1.24
DDX55-208ENST00000541259 CTRB1P17538 263 aa7.31□□□□□ -1.24
DDX55-208ENST00000541259 CHRNA7P36544 502 aa7.31□□□□□ -1.24
DDX55-208ENST00000541259 CTRB2Q6GPI1 263 aa7.31□□□□□ -1.24
DDX55-208ENST00000541259 ZNF329Q86UD4 541 aa7.31□□□□□ -1.24
DDX55-208ENST00000541259 AKAP14Q86UN6 197 aa7.31□□□□□ -1.24
DDX55-208ENST00000541259 OR2T35Q8NGX2 323 aa7.31□□□□□ -1.24
DDX55-208ENST00000541259 OR2T6Q8NHC8 308 aa7.31□□□□□ -1.24
DDX55-208ENST00000541259 LINC01006Q8NI28 216 aa7.31□□□□□ -1.24
DDX55-208ENST00000541259 SMIM8Q96KF7 97 aa7.31□□□□□ -1.24
DDX55-208ENST00000541259 OR4C12Q96R67 309 aa7.31□□□□□ -1.24
DDX55-208ENST00000541259 P2RX4Q99571 388 aa7.31□□□□□ -1.24
DDX55-208ENST00000541259 SRSF8Q9BRL6 282 aaKnown RBP7.31□□□□□ -1.24
DDX55-208ENST00000541259 PSENENQ9NZ42 101 aa7.31□□□□□ -1.24
DDX55-208ENST00000541259 MBD2Q9UBB5 411 aa7.31□□□□□ -1.24
DDX55-208ENST00000541259 ATRQ13535 2644 aa7.3□□□□□ -1.24
DDX55-208ENST00000541259 FAM24AA6NFZ4 105 aa7.3□□□□□ -1.24
DDX55-208ENST00000541259 C15orf62A8K5M9 175 aa7.3□□□□□ -1.24
DDX55-208ENST00000541259 NPIPB5A8MRT5 1133 aa7.3□□□□□ -1.24
DDX55-208ENST00000541259 L7N2F9 121 aa7.3□□□□□ -1.24
DDX55-208ENST00000541259 IFNA10P01566 189 aa7.3□□□□□ -1.24
DDX55-208ENST00000541259 IGLV1-40P01703 118 aa7.3□□□□□ -1.24
DDX55-208ENST00000541259 RLN2P04090 185 aa7.3□□□□□ -1.24
DDX55-208ENST00000541259 CRYGCP07315 174 aa7.3□□□□□ -1.24
DDX55-208ENST00000541259 MDKP21741 143 aaPredicted RBP7.3□□□□□ -1.24
DDX55-208ENST00000541259 PPIFP30405 207 aaKnown RBP7.3□□□□□ -1.24
DDX55-208ENST00000541259 VAMP2P63027 116 aa7.3□□□□□ -1.24
DDX55-208ENST00000541259 ERHP84090 104 aaKnown RBP7.3□□□□□ -1.24
DDX55-208ENST00000541259 DEFA5Q01523 94 aa7.3□□□□□ -1.24
DDX55-208ENST00000541259 CFHR3Q02985 330 aa7.3□□□□□ -1.24
DDX55-208ENST00000541259 TMEM267Q0VDI3 215 aaPredicted RBP7.3□□□□□ -1.24
DDX55-208ENST00000541259 BSXQ3C1V8 233 aa7.3□□□□□ -1.24
DDX55-208ENST00000541259 SPANXN5Q5MJ07 72 aa7.3□□□□□ -1.24
DDX55-208ENST00000541259 HIST2H2BDQ6DRA6 164 aa7.3□□□□□ -1.24
DDX55-208ENST00000541259 PRSS54Q6PEW0 395 aa7.3□□□□□ -1.24
DDX55-208ENST00000541259 LCNL1Q6ZST4 164 aa7.3□□□□□ -1.24
DDX55-208ENST00000541259 OR11H4Q8NGC9 324 aa7.3□□□□□ -1.24
DDX55-208ENST00000541259 FAM110DQ8TAY7 271 aaPredicted RBP7.3□□□□□ -1.24
DDX55-208ENST00000541259 ASB13Q8WXK3 278 aa7.3□□□□□ -1.24
DDX55-208ENST00000541259 MS4A10Q96PG2 267 aa7.3□□□□□ -1.24
DDX55-208ENST00000541259 RAB40CQ96S21 281 aa7.3□□□□□ -1.24
DDX55-208ENST00000541259 HIPK2Q9H2X6 1198 aa7.3□□□□□ -1.24
DDX55-208ENST00000541259 ZFP57Q9NU63 452 aa7.3□□□□□ -1.24
DDX55-208ENST00000541259 CACFD1Q9UGQ2 172 aa7.3□□□□□ -1.24
DDX55-208ENST00000541259 IGHV3-21A0A0B4J1V1 117 aa7.29□□□□□ -1.24
DDX55-208ENST00000541259 IGSF23A1L1A6 192 aa7.29□□□□□ -1.24
DDX55-208ENST00000541259 PSMB11A5LHX3 300 aa7.29□□□□□ -1.24
DDX55-208ENST00000541259 E5RGE8 158 aa7.29□□□□□ -1.24
DDX55-208ENST00000541259 HKR1P10072 659 aa7.29□□□□□ -1.24
DDX55-208ENST00000541259 LYL1P12980 280 aa7.29□□□□□ -1.24
DDX55-208ENST00000541259 SNCAP37840 140 aa7.29□□□□□ -1.24
DDX55-208ENST00000541259 RPL23AP62750 156 aaKnown RBP7.29□□□□□ -1.24
DDX55-208ENST00000541259 MLANAQ16655 118 aa7.29□□□□□ -1.24
DDX55-208ENST00000541259 KRTAP24-1Q3LI83 254 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms