RNA–Protein interactions for RNA: ENST00000529500.1

PSMC3-206, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 563 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-206	ENST00000529500	LIPF	P07098	398 aa		11.22	□□□□□ -0.61
PSMC3-206	ENST00000529500	HOXB4	P17483	251 aa	Predicted RBP	11.22	□□□□□ -0.61
PSMC3-206	ENST00000529500	CHRNA7	P36544	502 aa		11.22	□□□□□ -0.61
PSMC3-206	ENST00000529500	OPRK1	P41145	380 aa		11.22	□□□□□ -0.61
PSMC3-206	ENST00000529500	NPBWR1	P48145	328 aa		11.22	□□□□□ -0.61
PSMC3-206	ENST00000529500	ELL	P55199	621 aa	Predicted RBP	11.22	□□□□□ -0.61
PSMC3-206	ENST00000529500	RPL8	P62917	257 aa	Known RBP	11.22	□□□□□ -0.61
PSMC3-206	ENST00000529500	HLA-DRB5	Q30154	266 aa		11.22	□□□□□ -0.61
PSMC3-206	ENST00000529500	BSX	Q3C1V8	233 aa		11.22	□□□□□ -0.61
PSMC3-206	ENST00000529500	FAM74A3	Q4VXF1	159 aa		11.22	□□□□□ -0.61
PSMC3-206	ENST00000529500	C2orf83	Q53S99	150 aa		11.22	□□□□□ -0.61
PSMC3-206	ENST00000529500	SOHLH1	Q5JUK2	328 aa		11.22	□□□□□ -0.61
PSMC3-206	ENST00000529500	FFAR4	Q5NUL3	377 aa		11.22	□□□□□ -0.61
PSMC3-206	ENST00000529500	AVPI1	Q5T686	147 aa		11.22	□□□□□ -0.61
PSMC3-206	ENST00000529500	ACSM6	Q6P461	480 aa		11.22	□□□□□ -0.61
PSMC3-206	ENST00000529500	RBMS3	Q6XE24	437 aa	Known RBP	11.22	□□□□□ -0.61
PSMC3-206	ENST00000529500	NAV3	Q8IVL0	2385 aa		11.22	□□□□□ -0.61
PSMC3-206	ENST00000529500	OR10G9	Q8NGN4	311 aa		11.22	□□□□□ -0.61
PSMC3-206	ENST00000529500	OR10G7	Q8NGN6	311 aa		11.22	□□□□□ -0.61
PSMC3-206	ENST00000529500	OR1L8	Q8NGR8	309 aa		11.22	□□□□□ -0.61
PSMC3-206	ENST00000529500	TMEM170A	Q8WVE7	144 aa		11.22	□□□□□ -0.61
PSMC3-206	ENST00000529500	P2RX4	Q99571	388 aa		11.22	□□□□□ -0.61
PSMC3-206	ENST00000529500	BPESC1	Q9GZL8	116 aa		11.22	□□□□□ -0.61
PSMC3-206	ENST00000529500	MAP1LC3B	Q9GZQ8	125 aa		11.22	□□□□□ -0.61
PSMC3-206	ENST00000529500	VSIR	Q9H7M9	311 aa		11.22	□□□□□ -0.61
PSMC3-206	ENST00000529500	PATZ1	Q9HBE1	687 aa	Known RBP	11.22	□□□□□ -0.61
PSMC3-206	ENST00000529500	NPVF	Q9HCQ7	196 aa		11.22	□□□□□ -0.61
PSMC3-206	ENST00000529500		A0A1B0GV50	99 aa		11.21	□□□□□ -0.61
PSMC3-206	ENST00000529500	SEC14L6	B5MCN3	397 aa		11.21	□□□□□ -0.61
PSMC3-206	ENST00000529500		M0R1W7	72 aa		11.21	□□□□□ -0.61
PSMC3-206	ENST00000529500	BCL2	P10415	239 aa		11.21	□□□□□ -0.61
PSMC3-206	ENST00000529500	PAX6	P26367	422 aa		11.21	□□□□□ -0.61
PSMC3-206	ENST00000529500	RPS16	P62249	146 aa	Known RBP	11.21	□□□□□ -0.61
PSMC3-206	ENST00000529500	KRTAP1-1	Q07627	177 aa		11.21	□□□□□ -0.61
PSMC3-206	ENST00000529500	RAB31	Q13636	194 aa		11.21	□□□□□ -0.61
PSMC3-206	ENST00000529500	KRTAP21-3	Q3LHN1	58 aa		11.21	□□□□□ -0.61
PSMC3-206	ENST00000529500	VMA21	Q3ZAQ7	101 aa		11.21	□□□□□ -0.61
PSMC3-206	ENST00000529500	LCN15	Q6UWW0	184 aa		11.21	□□□□□ -0.61
PSMC3-206	ENST00000529500	RPP25L	Q8N5L8	163 aa	Known RBP	11.21	□□□□□ -0.61
PSMC3-206	ENST00000529500	RARRES2	Q99969	163 aa		11.21	□□□□□ -0.61
PSMC3-206	ENST00000529500	COMMD5	Q9GZQ3	224 aa		11.21	□□□□□ -0.61
PSMC3-206	ENST00000529500	SMCO4	Q9NRQ5	59 aa		11.21	□□□□□ -0.61
PSMC3-206	ENST00000529500	VAX2	Q9UIW0	290 aa		11.21	□□□□□ -0.61
PSMC3-206	ENST00000529500	LSM4	Q9Y4Z0	139 aa	Known RBP	11.21	□□□□□ -0.61
PSMC3-206	ENST00000529500	ZAN	Q9Y493	2812 aa		11.2	□□□□□ -0.62
PSMC3-206	ENST00000529500	TSPAN4	O14817	238 aa		11.2	□□□□□ -0.62
PSMC3-206	ENST00000529500	CA2	P00918	260 aa		11.2	□□□□□ -0.62
PSMC3-206	ENST00000529500	GPR6	P46095	362 aa	Predicted RBP	11.2	□□□□□ -0.62
PSMC3-206	ENST00000529500	RHEB	Q15382	184 aa		11.2	□□□□□ -0.62
PSMC3-206	ENST00000529500	HAGH	Q16775	308 aa		11.2	□□□□□ -0.62
PSMC3-206	ENST00000529500	TREML4	Q6UXN2	200 aa		11.2	□□□□□ -0.62
PSMC3-206	ENST00000529500	MRPL41	Q8IXM3	137 aa	Known RBP	11.2	□□□□□ -0.62
PSMC3-206	ENST00000529500		Q8N7P7	452 aa		11.2	□□□□□ -0.62
PSMC3-206	ENST00000529500	TEX45	Q8NA69	505 aa		11.2	□□□□□ -0.62
PSMC3-206	ENST00000529500	RNF5	Q99942	180 aa		11.2	□□□□□ -0.62
PSMC3-206	ENST00000529500	TUBA4B	Q9H853	241 aa		11.2	□□□□□ -0.62
PSMC3-206	ENST00000529500	NDUFA4L2	Q9NRX3	87 aa		11.2	□□□□□ -0.62
PSMC3-206	ENST00000529500	GNG13	Q9P2W3	67 aa		11.2	□□□□□ -0.62
PSMC3-206	ENST00000529500	NF1	P21359	2839 aa		11.19	□□□□□ -0.62
PSMC3-206	ENST00000529500	IGHV4-61	A0A0C4DH41	118 aa		11.19	□□□□□ -0.62
PSMC3-206	ENST00000529500	BUB1B-PAK6	H3BSN5	160 aa		11.19	□□□□□ -0.62
PSMC3-206	ENST00000529500	CRLF1	O75462	422 aa		11.19	□□□□□ -0.62
PSMC3-206	ENST00000529500	IGKV1D-33	P01593	117 aa		11.19	□□□□□ -0.62
PSMC3-206	ENST00000529500	IGKV1-33	P01594	117 aa		11.19	□□□□□ -0.62
PSMC3-206	ENST00000529500	IGLV2-23	P01705	113 aa		11.19	□□□□□ -0.62
PSMC3-206	ENST00000529500	IGHV4-31	P0DP07	118 aa		11.19	□□□□□ -0.62
PSMC3-206	ENST00000529500	MAS1L	P35410	378 aa		11.19	□□□□□ -0.62
PSMC3-206	ENST00000529500	REG1B	P48304	166 aa		11.19	□□□□□ -0.62
PSMC3-206	ENST00000529500	ERH	P84090	104 aa	Known RBP	11.19	□□□□□ -0.62
PSMC3-206	ENST00000529500	C1orf122	Q6ZSJ8	110 aa		11.19	□□□□□ -0.62
PSMC3-206	ENST00000529500	RXFP4	Q8TDU9	374 aa		11.19	□□□□□ -0.62
PSMC3-206	ENST00000529500	HINT2	Q9BX68	163 aa		11.19	□□□□□ -0.62
PSMC3-206	ENST00000529500	MANBAL	Q9NQG1	85 aa		11.19	□□□□□ -0.62
PSMC3-206	ENST00000529500	DSCAML1	Q8TD84	2053 aa		11.19	□□□□□ -0.62
PSMC3-206	ENST00000529500	DNHD1	Q96M86	4753 aa		11.19	□□□□□ -0.62
PSMC3-206	ENST00000529500	SMCO3	A2RU48	225 aa		11.18	□□□□□ -0.62
PSMC3-206	ENST00000529500	LY6L	H3BQJ8	138 aa		11.18	□□□□□ -0.62
PSMC3-206	ENST00000529500	OR13C7	P0DN81	318 aa		11.18	□□□□□ -0.62
PSMC3-206	ENST00000529500	RNASE2	P10153	161 aa	Known RBP	11.18	□□□□□ -0.62
PSMC3-206	ENST00000529500	GPX4	P36969	197 aa	Predicted RBP	11.18	□□□□□ -0.62
PSMC3-206	ENST00000529500	TEPP	Q6URK8	271 aa		11.18	□□□□□ -0.62
PSMC3-206	ENST00000529500	SSX7	Q7RTT5	188 aa		11.18	□□□□□ -0.62
PSMC3-206	ENST00000529500	KIR3DL3	Q8N743	410 aa		11.18	□□□□□ -0.62
PSMC3-206	ENST00000529500	OR11H6	Q8NGC7	330 aa		11.18	□□□□□ -0.62
PSMC3-206	ENST00000529500	C17orf50	Q8WW18	174 aa		11.18	□□□□□ -0.62
PSMC3-206	ENST00000529500	CACNG8	Q8WXS5	425 aa		11.18	□□□□□ -0.62
PSMC3-206	ENST00000529500	RAB24	Q969Q5	203 aa		11.18	□□□□□ -0.62
PSMC3-206	ENST00000529500	MGST2	Q99735	147 aa		11.18	□□□□□ -0.62
PSMC3-206	ENST00000529500	GGTLC1	Q9BX51	225 aa		11.18	□□□□□ -0.62
PSMC3-206	ENST00000529500	TMEM160	Q9NX00	188 aa		11.18	□□□□□ -0.62
PSMC3-206	ENST00000529500	FN1	P02751	2386 aa	Known RBP	11.18	□□□□□ -0.62
PSMC3-206	ENST00000529500	LOC105371242	A0A075B767	164 aa		11.17	□□□□□ -0.62
PSMC3-206	ENST00000529500	C7orf77	A4D0Y5	90 aa		11.17	□□□□□ -0.62
PSMC3-206	ENST00000529500	C22orf46	C9J442	243 aa		11.17	□□□□□ -0.62
PSMC3-206	ENST00000529500	NUPL2	O15504	423 aa	Known RBP	11.17	□□□□□ -0.62
PSMC3-206	ENST00000529500	TGFA	P01135	160 aa		11.17	□□□□□ -0.62
PSMC3-206	ENST00000529500	RPL29	P47914	159 aa	Known RBP	11.17	□□□□□ -0.62
PSMC3-206	ENST00000529500	CDC34	P49427	236 aa	Predicted RBP	11.17	□□□□□ -0.62
PSMC3-206	ENST00000529500	PSMB3	P49720	205 aa		11.17	□□□□□ -0.62
PSMC3-206	ENST00000529500	SUB1	P53999	127 aa	Known RBP eCLIP	11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms