RNA–Protein interactions for RNA: ENST00000526553.5

CD44-223, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-223ENST00000526553 IGF2BP2-AS1Q96M15 143 aa2.14□□□□□ -2.07
CD44-223ENST00000526553 NKX6-2Q9C056 277 aaPredicted RBP2.14□□□□□ -2.07
CD44-223ENST00000526553 OR51I2Q9H344 312 aa2.14□□□□□ -2.07
CD44-223ENST00000526553 PARVBQ9HBI1 364 aa2.14□□□□□ -2.07
CD44-223ENST00000526553 GUCA1BQ9UMX6 200 aa2.14□□□□□ -2.07
CD44-223ENST00000526553 PCYT1BQ9Y5K3 369 aaPredicted RBP2.14□□□□□ -2.07
CD44-223ENST00000526553 OR51B4Q9Y5P0 310 aa2.14□□□□□ -2.07
CD44-223ENST00000526553 LAMA4Q16363 1823 aa2.14□□□□□ -2.07
CD44-223ENST00000526553 IGF2RP11717 2491 aa2.13□□□□□ -2.07
CD44-223ENST00000526553 CEP192Q8TEP8 1941 aa2.13□□□□□ -2.07
CD44-223ENST00000526553 GOLGA4Q13439 2230 aaKnown RBP2.13□□□□□ -2.07
CD44-223ENST00000526553 ASXL3Q9C0F0 2248 aa2.13□□□□□ -2.07
CD44-223ENST00000526553 GCN1Q92616 2671 aaKnown RBP2.13□□□□□ -2.07
CD44-223ENST00000526553 DHRS12A0PJE2 317 aa2.13□□□□□ -2.07
CD44-223ENST00000526553 PCNX2A6NKB5 2137 aa2.13□□□□□ -2.07
CD44-223ENST00000526553 DISC1C4P0D8 188 aa2.13□□□□□ -2.07
CD44-223ENST00000526553 TP53I11O14683 189 aa2.13□□□□□ -2.07
CD44-223ENST00000526553 GSTZ1O43708 216 aaPredicted RBP2.13□□□□□ -2.07
CD44-223ENST00000526553 OR10J1P30954 320 aa2.13□□□□□ -2.07
CD44-223ENST00000526553 SLCO1A2P46721 670 aa2.13□□□□□ -2.07
CD44-223ENST00000526553 RAP1GDS1P52306 607 aa2.13□□□□□ -2.07
CD44-223ENST00000526553 HOXC5Q00444 222 aa2.13□□□□□ -2.07
CD44-223ENST00000526553 DEFA6Q01524 100 aa2.13□□□□□ -2.07
CD44-223ENST00000526553 NDUFA5Q16718 116 aa2.13□□□□□ -2.07
CD44-223ENST00000526553 TCF24Q7RTU0 167 aa2.13□□□□□ -2.07
CD44-223ENST00000526553 CROCCP2Q86T23 111 aa2.13□□□□□ -2.07
CD44-223ENST00000526553 LY6G5BQ8NDX9 201 aa2.13□□□□□ -2.07
CD44-223ENST00000526553 GPR32P1Q8NGA4 272 aa2.13□□□□□ -2.07
CD44-223ENST00000526553 MUC7Q8TAX7 377 aa2.13□□□□□ -2.07
CD44-223ENST00000526553 GPR119Q8TDV5 335 aa2.13□□□□□ -2.07
CD44-223ENST00000526553 C16orf78Q8WTQ4 265 aa2.13□□□□□ -2.07
CD44-223ENST00000526553 STACQ99469 402 aa2.13□□□□□ -2.07
CD44-223ENST00000526553 PKMYT1Q99640 499 aa2.13□□□□□ -2.07
CD44-223ENST00000526553 MND1Q9BWT6 205 aa2.13□□□□□ -2.07
CD44-223ENST00000526553 FKBP14Q9NWM8 211 aa2.13□□□□□ -2.07
CD44-223ENST00000526553 IL20Q9NYY1 176 aa2.13□□□□□ -2.07
CD44-223ENST00000526553 NAV2Q8IVL1 2488 aa2.13□□□□□ -2.07
CD44-223ENST00000526553 FLNBO75369 2602 aaKnown RBP2.13□□□□□ -2.07
CD44-223ENST00000526553 CEP295Q9C0D2 2601 aa2.13□□□□□ -2.07
CD44-223ENST00000526553 F5P12259 2224 aa2.13□□□□□ -2.07
CD44-223ENST00000526553 ASCC3Q8N3C0 2202 aaKnown RBP2.13□□□□□ -2.07
CD44-223ENST00000526553 FRYQ5TBA9 3013 aa2.12□□□□□ -2.07
CD44-223ENST00000526553 EML5Q05BV3 1969 aa2.12□□□□□ -2.07
CD44-223ENST00000526553 PLIN4Q96Q06 1357 aa2.12□□□□□ -2.07
CD44-223ENST00000526553 IGSF23A1L1A6 192 aa2.12□□□□□ -2.07
CD44-223ENST00000526553 KRT75O95678 551 aa2.12□□□□□ -2.07
CD44-223ENST00000526553 IDO1P14902 403 aa2.12□□□□□ -2.07
CD44-223ENST00000526553 CD36P16671 472 aa2.12□□□□□ -2.07
CD44-223ENST00000526553 S100A1P23297 94 aa2.12□□□□□ -2.07
CD44-223ENST00000526553 NPPCP23582 126 aa2.12□□□□□ -2.07
CD44-223ENST00000526553 COL8A2P25067 703 aa2.12□□□□□ -2.07
CD44-223ENST00000526553 TMEM33P57088 247 aa2.12□□□□□ -2.07
CD44-223ENST00000526553 HIST3H3Q16695 136 aa2.12□□□□□ -2.07
CD44-223ENST00000526553 PLPPR5Q32ZL2 321 aa2.12□□□□□ -2.07
CD44-223ENST00000526553 C1orf195Q5TG92 126 aa2.12□□□□□ -2.07
CD44-223ENST00000526553 NOXRED1Q6NXP6 359 aa2.12□□□□□ -2.07
CD44-223ENST00000526553 WDR59Q6PJI9 974 aa2.12□□□□□ -2.07
CD44-223ENST00000526553 SDIM1Q6ZPB5 146 aa2.12□□□□□ -2.07
CD44-223ENST00000526553 TMPPEQ6ZT21 453 aa2.12□□□□□ -2.07
CD44-223ENST00000526553 CCDC121Q6ZUS5 278 aa2.12□□□□□ -2.07
CD44-223ENST00000526553 ZNF567Q8N184 647 aa2.12□□□□□ -2.07
CD44-223ENST00000526553 OR10P1Q8NGE3 313 aa2.12□□□□□ -2.07
CD44-223ENST00000526553 ANKRD7Q92527 254 aa2.12□□□□□ -2.07
CD44-223ENST00000526553 OR8B2Q96RD0 313 aa2.12□□□□□ -2.07
CD44-223ENST00000526553 TSC22D3Q99576 134 aa2.12□□□□□ -2.07
CD44-223ENST00000526553 UPK3BQ9BT76 320 aa2.12□□□□□ -2.07
CD44-223ENST00000526553 TRIM4Q9C037 500 aa2.12□□□□□ -2.07
CD44-223ENST00000526553 SMDT1Q9H4I9 107 aa2.12□□□□□ -2.07
CD44-223ENST00000526553 LSM5Q9Y4Y9 91 aaKnown RBP2.12□□□□□ -2.07
CD44-223ENST00000526553 ZFHX4Q86UP3 3567 aa2.12□□□□□ -2.07
CD44-223ENST00000526553 PTPRJQ12913 1337 aa2.12□□□□□ -2.07
CD44-223ENST00000526553 ACACAQ13085 2346 aa2.12□□□□□ -2.07
CD44-223ENST00000526553 DSPP15924 2871 aaKnown RBP2.12□□□□□ -2.07
CD44-223ENST00000526553 NBEAQ8NFP9 2946 aa2.11□□□□□ -2.07
CD44-223ENST00000526553 BPTFQ12830 3046 aa2.11□□□□□ -2.07
CD44-223ENST00000526553 PRR14LQ5THK1 2151 aa2.11□□□□□ -2.07
CD44-223ENST00000526553 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.11□□□□□ -2.07
CD44-223ENST00000526553 GRIFINA4D1Z8 144 aa2.11□□□□□ -2.07
CD44-223ENST00000526553 M0R381 172 aa2.11□□□□□ -2.07
CD44-223ENST00000526553 PFDN1O60925 122 aa2.11□□□□□ -2.07
CD44-223ENST00000526553 RAB5BP61020 215 aa2.11□□□□□ -2.07
CD44-223ENST00000526553 EMX1Q04741 257 aaPredicted RBP2.11□□□□□ -2.07
CD44-223ENST00000526553 JOSD1Q15040 202 aaPredicted RBP2.11□□□□□ -2.07
CD44-223ENST00000526553 SNCBQ16143 134 aa2.11□□□□□ -2.07
CD44-223ENST00000526553 CCDC153Q494R4 210 aa2.11□□□□□ -2.07
CD44-223ENST00000526553 ACSM3Q53FZ2 586 aa2.11□□□□□ -2.07
CD44-223ENST00000526553 SCXQ7RTU7 201 aa2.11□□□□□ -2.07
CD44-223ENST00000526553 GID4Q8IVV7 300 aa2.11□□□□□ -2.07
CD44-223ENST00000526553 UBL4BQ8N7F7 174 aa2.11□□□□□ -2.07
CD44-223ENST00000526553 OR10A6Q8NH74 314 aa2.11□□□□□ -2.07
CD44-223ENST00000526553 FNDC9Q8TBE3 224 aa2.11□□□□□ -2.07
CD44-223ENST00000526553 PARD6GQ9BYG4 376 aaPredicted RBP2.11□□□□□ -2.07
CD44-223ENST00000526553 C11orf1Q9H5F2 150 aa2.11□□□□□ -2.07
CD44-223ENST00000526553 ASPMQ8IZT6 3477 aa2.11□□□□□ -2.07
CD44-223ENST00000526553 MYO18AQ92614 2054 aaKnown RBP2.11□□□□□ -2.07
CD44-223ENST00000526553 URB1O60287 2271 aaKnown RBP2.11□□□□□ -2.07
CD44-223ENST00000526553 AKAP13Q12802 2813 aa2.1□□□□□ -2.07
CD44-223ENST00000526553 CACNA1EQ15878 2313 aa2.1□□□□□ -2.07
CD44-223ENST00000526553 A0A1W2PNN7 141 aa2.1□□□□□ -2.07
CD44-223ENST00000526553 SLC17A3O00476 420 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms