RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 GINS4Q9BRT9 223 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 ZNF2Q9BSG1 426 aaPredicted RBP2.27□□□□□ -2.05
CSDE1-208ENST00000524652 RTBDNQ9BSG5 229 aaPredicted RBP2.27□□□□□ -2.05
CSDE1-208ENST00000524652 BEX2Q9BXY8 128 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 CHIAQ9BZP6 476 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 C5orf66Q9H5L9 145 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 HEXA-AS1Q9H8Q6 139 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 PLSCR3Q9NRY6 295 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 NECAP2Q9NVZ3 263 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 KCNIP1Q9NZI2 227 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 DPM3Q9P2X0 92 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 ZNF221Q9UK13 617 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 MGAT4AQ9UM21 535 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 FLVCR2Q9UPI3 526 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 VSIG4Q9Y279 399 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 MINOS1-NBL1R4GNA1 71 aa2.27□□□□□ -2.05
CSDE1-208ENST00000524652 MUC2Q02817 5179 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 A0A0G2JRQ6 117 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 hCG_1809904A0A1W2PP81 198 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 A0A1W2PPE2 198 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 A0A1W2PR64 198 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 A0A1W2PRV1 198 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 A6NDX4 124 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 SRRM4A7MD48 611 aaKnown RBP2.26□□□□□ -2.05
CSDE1-208ENST00000524652 LEUTXA8MZ59 168 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 H0YJW9 148 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 M0R1X1 148 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 RAB29O14966 203 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 RAMP3O60896 148 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 UPK1BO75841 260 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 S1PR2O95136 353 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 NDUFA3O95167 84 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 IGKV1D-33P01593 117 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 IGKV1-33P01594 117 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 RLN1P04808 185 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 CRYGBP07316 175 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 FBP1P09467 338 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 CTXN2P0C2S0 81 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 AKAIN1P0CW23 69 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 SPNP16150 400 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 DYNLT3P51808 116 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 PRRX1P54821 245 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 TAS2R46P59540 309 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 BPIFB3P59826 476 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 KRTAP10-8P60410 259 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 ACTBP60709 375 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 BLCAPP62952 87 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 UBA52P62987 128 aaKnown RBP2.26□□□□□ -2.05
CSDE1-208ENST00000524652 ACTG1P63261 375 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 SUPT4H1P63272 117 aaKnown RBP2.26□□□□□ -2.05
CSDE1-208ENST00000524652 CX3CL1P78423 397 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 MRPS10P82664 201 aaKnown RBP2.26□□□□□ -2.05
CSDE1-208ENST00000524652 NDPQ00604 133 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 SSBP1Q04837 148 aaKnown RBP2.26□□□□□ -2.05
CSDE1-208ENST00000524652 ZNF846Q147U1 533 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 LRRC75BQ2VPJ9 315 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 TMEM95Q3KNT9 176 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 SCGB2B2Q4G0G5 96 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 PHLDA2Q53GA4 152 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 RNASE10Q5GAN6 216 aaKnown RBP2.26□□□□□ -2.05
CSDE1-208ENST00000524652 OR2B11Q5JQS5 317 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 SPANXN2Q5MJ10 180 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 ZNF57Q68EA5 555 aaPredicted RBP2.26□□□□□ -2.05
CSDE1-208ENST00000524652 FAM71F2Q6NXP2 309 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 C10orf99Q6UWK7 81 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 MOB3BQ86TA1 216 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 TGIF2LXQ8IUE1 241 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 VKORC1L1Q8N0U8 176 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 TOMM5Q8N4H5 51 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 ARRDC1Q8N5I2 433 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 FAM71E2Q8N5Q1 922 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.26□□□□□ -2.05
CSDE1-208ENST00000524652 GDPD1Q8N9F7 314 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 Q8N9W7 124 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 OR10G8Q8NGN5 311 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 OR10X1Q8NGY0 326 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 LHFPL5Q8TAF8 219 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 CAPSLQ8WWF8 208 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 RASL10AQ92737 203 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 TOMM40LQ969M1 308 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 RPEQ96AT9 228 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 TP53RKQ96S44 253 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 HSPB9Q9BQS6 159 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 RAB9BQ9NP90 201 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 ABCB10Q9NRK6 738 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 SLC2A8Q9NY64 477 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 TAS2R8Q9NYW2 309 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 PIPOXQ9P0Z9 390 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 RABL2AQ9UBK7 228 aaPredicted RBP2.26□□□□□ -2.05
CSDE1-208ENST00000524652 ZNF107Q9UII5 783 aaPredicted RBP2.26□□□□□ -2.05
CSDE1-208ENST00000524652 VPREB3Q9UKI3 123 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 RABL2BQ9UNT1 228 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 GPR132Q9UNW8 380 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 SIGLEC9Q9Y336 463 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 FBXO7Q9Y3I1 522 aa2.26□□□□□ -2.05
CSDE1-208ENST00000524652 AMMECR1Q9Y4X0 333 aaPredicted RBP2.26□□□□□ -2.05
CSDE1-208ENST00000524652 TRAV3A0A0B4J244 114 aa2.25□□□□□ -2.05
CSDE1-208ENST00000524652 A0A1B0GW64 132 aa2.25□□□□□ -2.05
CSDE1-208ENST00000524652 CRYM-AS1A6NIL9 109 aa2.25□□□□□ -2.05
CSDE1-208ENST00000524652 OOSP1A8MZH6 123 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms