RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 FXYD3Q14802 87 aa10.34□□□□□ -0.75
CPNE3-205ENST00000522240 BSXQ3C1V8 233 aa10.34□□□□□ -0.75
CPNE3-205ENST00000522240 INO80EQ8NBZ0 244 aaPredicted RBP10.34□□□□□ -0.75
CPNE3-205ENST00000522240 GRPEL2Q8TAA5 225 aa10.34□□□□□ -0.75
CPNE3-205ENST00000522240 SLC25A31Q9H0C2 315 aa10.34□□□□□ -0.75
CPNE3-205ENST00000522240 SONP18583 2426 aaKnown RBP10.34□□□□□ -0.75
CPNE3-205ENST00000522240 E7EUB6 86 aa10.33□□□□□ -0.76
CPNE3-205ENST00000522240 CLDN34H7C241 214 aa10.33□□□□□ -0.76
CPNE3-205ENST00000522240 KCNAB3O43448 404 aa10.33□□□□□ -0.76
CPNE3-205ENST00000522240 OPN1MWP04001 364 aa10.33□□□□□ -0.76
CPNE3-205ENST00000522240 OPN1MW2P0DN77 364 aa10.33□□□□□ -0.76
CPNE3-205ENST00000522240 OPN1MW3P0DN78 364 aa10.33□□□□□ -0.76
CPNE3-205ENST00000522240 NPY1RP25929 384 aa10.33□□□□□ -0.76
CPNE3-205ENST00000522240 RPL12P30050 165 aaKnown RBP10.33□□□□□ -0.76
CPNE3-205ENST00000522240 CAV2P51636 162 aa10.33□□□□□ -0.76
CPNE3-205ENST00000522240 ERHP84090 104 aaKnown RBP10.33□□□□□ -0.76
CPNE3-205ENST00000522240 BAXQ07812 192 aa10.33□□□□□ -0.76
CPNE3-205ENST00000522240 TMEM14EPQ6UXP3 125 aa10.33□□□□□ -0.76
CPNE3-205ENST00000522240 ACOT7LQ6ZUV0 252 aa10.33□□□□□ -0.76
CPNE3-205ENST00000522240 STPG2Q8N412 459 aa10.33□□□□□ -0.76
CPNE3-205ENST00000522240 C9orf62Q8N4C0 152 aa10.33□□□□□ -0.76
CPNE3-205ENST00000522240 TMEM252Q8N6L7 170 aa10.33□□□□□ -0.76
CPNE3-205ENST00000522240 ZNF114Q8NC26 417 aa10.33□□□□□ -0.76
CPNE3-205ENST00000522240 SLC24A4Q8NFF2 622 aa10.33□□□□□ -0.76
CPNE3-205ENST00000522240 ZNF418Q8TF45 676 aaPredicted RBP10.33□□□□□ -0.76
CPNE3-205ENST00000522240 HSPB9Q9BQS6 159 aa10.33□□□□□ -0.76
CPNE3-205ENST00000522240 MFFQ9GZY8 342 aa10.33□□□□□ -0.76
CPNE3-205ENST00000522240 STRAPQ9Y3F4 350 aaKnown RBP10.33□□□□□ -0.76
CPNE3-205ENST00000522240 U3KQ87 197 aa10.33□□□□□ -0.76
CPNE3-205ENST00000522240 ANK3Q12955 4377 aaKnown RBP10.33□□□□□ -0.76
CPNE3-205ENST00000522240 A0A0D9SG52 128 aa10.32□□□□□ -0.76
CPNE3-205ENST00000522240 IGSF23A1L1A6 192 aa10.32□□□□□ -0.76
CPNE3-205ENST00000522240 DNAJC9-AS1A6NH13 148 aa10.32□□□□□ -0.76
CPNE3-205ENST00000522240 MSGN1A6NI15 193 aa10.32□□□□□ -0.76
CPNE3-205ENST00000522240 C15orf62A8K5M9 175 aa10.32□□□□□ -0.76
CPNE3-205ENST00000522240 INAFM1C9JVW0 142 aa10.32□□□□□ -0.76
CPNE3-205ENST00000522240 H3BP45 60 aa10.32□□□□□ -0.76
CPNE3-205ENST00000522240 IGHG2P01859 326 aa10.32□□□□□ -0.76
CPNE3-205ENST00000522240 HKR1P10072 659 aa10.32□□□□□ -0.76
CPNE3-205ENST00000522240 HTR2BP41595 481 aa10.32□□□□□ -0.76
CPNE3-205ENST00000522240 NKX2-5P52952 324 aaPredicted RBP10.32□□□□□ -0.76
CPNE3-205ENST00000522240 EWSR1Q01844 656 aaKnown RBP eCLIP10.32□□□□□ -0.76
CPNE3-205ENST00000522240 WT1-ASQ06250 92 aa10.32□□□□□ -0.76
CPNE3-205ENST00000522240 C2orf83Q53S99 150 aa10.32□□□□□ -0.76
CPNE3-205ENST00000522240 SPANXN5Q5MJ07 72 aa10.32□□□□□ -0.76
CPNE3-205ENST00000522240 Q71RC1 249 aaPredicted RBP10.32□□□□□ -0.76
CPNE3-205ENST00000522240 STX12Q86Y82 276 aa10.32□□□□□ -0.76
CPNE3-205ENST00000522240 KCNRGQ8N5I3 272 aa10.32□□□□□ -0.76
CPNE3-205ENST00000522240 OR10W1Q8NGF6 305 aa10.32□□□□□ -0.76
CPNE3-205ENST00000522240 SGMS2Q8NHU3 365 aa10.32□□□□□ -0.76
CPNE3-205ENST00000522240 ABHD5Q8WTS1 349 aa10.32□□□□□ -0.76
CPNE3-205ENST00000522240 TMEM68Q96MH6 324 aa10.32□□□□□ -0.76
CPNE3-205ENST00000522240 OR4C12Q96R67 309 aa10.32□□□□□ -0.76
CPNE3-205ENST00000522240 ZNF580Q9UK33 172 aa10.32□□□□□ -0.76
CPNE3-205ENST00000522240 HSPB11Q9Y547 144 aa10.32□□□□□ -0.76
CPNE3-205ENST00000522240 FAM24AA6NFZ4 105 aa10.31□□□□□ -0.76
CPNE3-205ENST00000522240 NPIPB5A8MRT5 1133 aa10.31□□□□□ -0.76
CPNE3-205ENST00000522240 ATP6V0E1O15342 81 aa10.31□□□□□ -0.76
CPNE3-205ENST00000522240 IFNA10P01566 189 aa10.31□□□□□ -0.76
CPNE3-205ENST00000522240 OR8U8P0C7N1 319 aa10.31□□□□□ -0.76
CPNE3-205ENST00000522240 FAM157CP0CG43 387 aa10.31□□□□□ -0.76
CPNE3-205ENST00000522240 OR13C7P0DN81 318 aa10.31□□□□□ -0.76
CPNE3-205ENST00000522240 RNASE2P10153 161 aaKnown RBP10.31□□□□□ -0.76
CPNE3-205ENST00000522240 CXCL2P19875 107 aa10.31□□□□□ -0.76
CPNE3-205ENST00000522240 C4BPBP20851 252 aa10.31□□□□□ -0.76
CPNE3-205ENST00000522240 SULT1A1P50225 295 aa10.31□□□□□ -0.76
CPNE3-205ENST00000522240 RPL15P61313 204 aaKnown RBP10.31□□□□□ -0.76
CPNE3-205ENST00000522240 RAB11AP62491 216 aa10.31□□□□□ -0.76
CPNE3-205ENST00000522240 SPATA3Q8NHX4 192 aa10.31□□□□□ -0.76
CPNE3-205ENST00000522240 NPFFR1Q9GZQ6 430 aa10.31□□□□□ -0.76
CPNE3-205ENST00000522240 PARP11Q9NR21 331 aa10.31□□□□□ -0.76
CPNE3-205ENST00000522240 NBEAL1Q6ZS30 2694 aa10.3□□□□□ -0.76
CPNE3-205ENST00000522240 FBN1P35555 2871 aaKnown RBP10.3□□□□□ -0.76
CPNE3-205ENST00000522240 ELOA3CA0A087WX78 387 aaPredicted RBP10.3□□□□□ -0.76
CPNE3-205ENST00000522240 IGF1P05019 195 aa10.3□□□□□ -0.76
CPNE3-205ENST00000522240 METTL15P1P0C7V9 234 aa10.3□□□□□ -0.76
CPNE3-205ENST00000522240 AREGP15514 252 aa10.3□□□□□ -0.76
CPNE3-205ENST00000522240 CTRB1P17538 263 aa10.3□□□□□ -0.76
CPNE3-205ENST00000522240 SNCAP37840 140 aa10.3□□□□□ -0.76
CPNE3-205ENST00000522240 SUB1P53999 127 aaKnown RBP eCLIP10.3□□□□□ -0.76
CPNE3-205ENST00000522240 HILS1P60008 231 aa10.3□□□□□ -0.76
CPNE3-205ENST00000522240 TMEM267Q0VDI3 215 aaPredicted RBP10.3□□□□□ -0.76
CPNE3-205ENST00000522240 LGALSLQ3ZCW2 172 aaPredicted RBP10.3□□□□□ -0.76
CPNE3-205ENST00000522240 PVRIGQ6DKI7 326 aa10.3□□□□□ -0.76
CPNE3-205ENST00000522240 CTRB2Q6GPI1 263 aa10.3□□□□□ -0.76
CPNE3-205ENST00000522240 LAMTOR1Q6IAA8 161 aa10.3□□□□□ -0.76
CPNE3-205ENST00000522240 SLC35E3Q7Z769 313 aa10.3□□□□□ -0.76
CPNE3-205ENST00000522240 OR1L6Q8NGR2 347 aa10.3□□□□□ -0.76
CPNE3-205ENST00000522240 JMJD8Q96S16 334 aa10.3□□□□□ -0.76
CPNE3-205ENST00000522240 ZC4H2Q9NQZ6 224 aa10.3□□□□□ -0.76
CPNE3-205ENST00000522240 FBXO7Q9Y3I1 522 aa10.3□□□□□ -0.76
CPNE3-205ENST00000522240 F11RQ9Y624 299 aaKnown RBP10.3□□□□□ -0.76
CPNE3-205ENST00000522240 PMS2P5A8MQ11 134 aa10.29□□□□□ -0.76
CPNE3-205ENST00000522240 CRLF1O75462 422 aa10.29□□□□□ -0.76
CPNE3-205ENST00000522240 TSPAN9O75954 239 aa10.29□□□□□ -0.76
CPNE3-205ENST00000522240 CRYGCP07315 174 aa10.29□□□□□ -0.76
CPNE3-205ENST00000522240 RNASE1P07998 156 aaKnown RBP10.29□□□□□ -0.76
CPNE3-205ENST00000522240 EGR2P11161 476 aaPredicted RBP10.29□□□□□ -0.76
CPNE3-205ENST00000522240 S100A11P31949 105 aa10.29□□□□□ -0.76
CPNE3-205ENST00000522240 HBG1P69891 147 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms