RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 WFDC1Q9HC57 220 aa7.58□□□□□ -1.2
TPM3-222ENST00000515609 PARP11Q9NR21 331 aa7.58□□□□□ -1.2
TPM3-222ENST00000515609 WDR83OSQ9Y284 106 aa7.58□□□□□ -1.2
TPM3-222ENST00000515609 AKAP6Q13023 2319 aa7.58□□□□□ -1.2
TPM3-222ENST00000515609 COL12A1Q99715 3063 aa7.58□□□□□ -1.2
TPM3-222ENST00000515609 IGLC7A0M8Q6 106 aa7.57□□□□□ -1.2
TPM3-222ENST00000515609 PMS2P5A8MQ11 134 aa7.57□□□□□ -1.2
TPM3-222ENST00000515609 MT-CO2P00403 227 aa7.57□□□□□ -1.2
TPM3-222ENST00000515609 OPN1MWP04001 364 aa7.57□□□□□ -1.2
TPM3-222ENST00000515609 NMBP08949 121 aa7.57□□□□□ -1.2
TPM3-222ENST00000515609 OPN1MW2P0DN77 364 aa7.57□□□□□ -1.2
TPM3-222ENST00000515609 OPN1MW3P0DN78 364 aa7.57□□□□□ -1.2
TPM3-222ENST00000515609 RNASE2P10153 161 aaKnown RBP7.57□□□□□ -1.2
TPM3-222ENST00000515609 OPRK1P41145 380 aa7.57□□□□□ -1.2
TPM3-222ENST00000515609 SELENOTP62341 195 aa7.57□□□□□ -1.2
TPM3-222ENST00000515609 CD69Q07108 199 aa7.57□□□□□ -1.2
TPM3-222ENST00000515609 ACOT6Q3I5F7 207 aaPredicted RBP7.57□□□□□ -1.2
TPM3-222ENST00000515609 BTNL8Q6UX41 500 aa7.57□□□□□ -1.2
TPM3-222ENST00000515609 CLEC9AQ6UXN8 241 aa7.57□□□□□ -1.2
TPM3-222ENST00000515609 IL34Q6ZMJ4 242 aa7.57□□□□□ -1.2
TPM3-222ENST00000515609 TMEM144Q7Z5S9 345 aa7.57□□□□□ -1.2
TPM3-222ENST00000515609 SLC25A33Q9BSK2 321 aa7.57□□□□□ -1.2
TPM3-222ENST00000515609 GAR1Q9NY12 217 aaKnown RBP7.57□□□□□ -1.2
TPM3-222ENST00000515609 F11RQ9Y624 299 aaKnown RBP7.57□□□□□ -1.2
TPM3-222ENST00000515609 A0A0U1RQK1 487 aa7.56□□□□□ -1.2
TPM3-222ENST00000515609 RAB19A4D1S5 217 aa7.56□□□□□ -1.2
TPM3-222ENST00000515609 NPIPB5A8MRT5 1133 aa7.56□□□□□ -1.2
TPM3-222ENST00000515609 TSPAN15O95858 294 aa7.56□□□□□ -1.2
TPM3-222ENST00000515609 IGHV4-38-2P0DP08 117 aa7.56□□□□□ -1.2
TPM3-222ENST00000515609 CNTFRP26992 372 aa7.56□□□□□ -1.2
TPM3-222ENST00000515609 S100A7P31151 101 aa7.56□□□□□ -1.2
TPM3-222ENST00000515609 TAGLN2P37802 199 aaKnown RBP7.56□□□□□ -1.2
TPM3-222ENST00000515609 CX3CL1P78423 397 aa7.56□□□□□ -1.2
TPM3-222ENST00000515609 WT1-ASQ06250 92 aa7.56□□□□□ -1.2
TPM3-222ENST00000515609 ARL16Q0P5N6 197 aa7.56□□□□□ -1.2
TPM3-222ENST00000515609 PJVKQ0ZLH3 352 aa7.56□□□□□ -1.2
TPM3-222ENST00000515609 TUSC1Q2TAM9 212 aa7.56□□□□□ -1.2
TPM3-222ENST00000515609 UQCC3Q6UW78 93 aa7.56□□□□□ -1.2
TPM3-222ENST00000515609 RBMS3Q6XE24 437 aaKnown RBP7.56□□□□□ -1.2
TPM3-222ENST00000515609 BRD3OSQ6XYD6 125 aa7.56□□□□□ -1.2
TPM3-222ENST00000515609 HAPLN4Q86UW8 402 aa7.56□□□□□ -1.2
TPM3-222ENST00000515609 DYNAPQ8N1N2 210 aa7.56□□□□□ -1.2
TPM3-222ENST00000515609 Q8N9W7 124 aa7.56□□□□□ -1.2
TPM3-222ENST00000515609 OR10W1Q8NGF6 305 aa7.56□□□□□ -1.2
TPM3-222ENST00000515609 SSMEM1Q8WWF3 244 aa7.56□□□□□ -1.2
TPM3-222ENST00000515609 RBMXL1Q96E39 390 aaKnown RBP7.56□□□□□ -1.2
TPM3-222ENST00000515609 RITA1Q96K30 269 aa7.56□□□□□ -1.2
TPM3-222ENST00000515609 P2RX4Q99571 388 aa7.56□□□□□ -1.2
TPM3-222ENST00000515609 PBDC1Q9BVG4 233 aa7.56□□□□□ -1.2
TPM3-222ENST00000515609 RNF24Q9Y225 148 aa7.56□□□□□ -1.2
TPM3-222ENST00000515609 SPG11Q96JI7 2443 aa7.56□□□□□ -1.2
TPM3-222ENST00000515609 TRAV30A0A087WSZ9 112 aa7.55□□□□□ -1.2
TPM3-222ENST00000515609 PRSS46E5RG02 174 aa7.55□□□□□ -1.2
TPM3-222ENST00000515609 H2AFB1P0C5Y9 115 aa7.55□□□□□ -1.2
TPM3-222ENST00000515609 FAM157CP0CG43 387 aa7.55□□□□□ -1.2
TPM3-222ENST00000515609 RPL29P47914 159 aaKnown RBP7.55□□□□□ -1.2
TPM3-222ENST00000515609 ZNF616Q08AN1 781 aa7.55□□□□□ -1.2
TPM3-222ENST00000515609 AKIRIN2Q53H80 203 aa7.55□□□□□ -1.2
TPM3-222ENST00000515609 TMEM41BQ5BJD5 291 aa7.55□□□□□ -1.2
TPM3-222ENST00000515609 FAM74A1Q5RGS3 127 aa7.55□□□□□ -1.2
TPM3-222ENST00000515609 RUSC1-AS1Q66K80 236 aa7.55□□□□□ -1.2
TPM3-222ENST00000515609 PVRIGQ6DKI7 326 aa7.55□□□□□ -1.2
TPM3-222ENST00000515609 TREML4Q6UXN2 200 aa7.55□□□□□ -1.2
TPM3-222ENST00000515609 TMEM182Q6ZP80 229 aaPredicted RBP7.55□□□□□ -1.2
TPM3-222ENST00000515609 Q6ZRG5 221 aa7.55□□□□□ -1.2
TPM3-222ENST00000515609 SLC16A13Q7RTY0 426 aa7.55□□□□□ -1.2
TPM3-222ENST00000515609 TTC9CQ8N5M4 171 aa7.55□□□□□ -1.2
TPM3-222ENST00000515609 FAM213BQ8TBF2 198 aa7.55□□□□□ -1.2
TPM3-222ENST00000515609 MARC2Q969Z3 335 aa7.55□□□□□ -1.2
TPM3-222ENST00000515609 BSCL2Q96G97 398 aaPredicted RBP7.55□□□□□ -1.2
TPM3-222ENST00000515609 RNF2Q99496 336 aa7.55□□□□□ -1.2
TPM3-222ENST00000515609 NPCDR1Q9BY65 106 aa7.55□□□□□ -1.2
TPM3-222ENST00000515609 ACTR3CQ9C0K3 210 aaPredicted RBP7.55□□□□□ -1.2
TPM3-222ENST00000515609 SMDT1Q9H4I9 107 aa7.55□□□□□ -1.2
TPM3-222ENST00000515609 TPSG1Q9NRR2 321 aa7.55□□□□□ -1.2
TPM3-222ENST00000515609 ANKRD17O75179 2603 aaKnown RBP7.55□□□□□ -1.2
TPM3-222ENST00000515609 DOPEY2Q9Y3R5 2298 aa7.54□□□□□ -1.2
TPM3-222ENST00000515609 NAV2Q8IVL1 2488 aa7.54□□□□□ -1.2
TPM3-222ENST00000515609 IGHV3OR16-10A0A075B7F0 116 aa7.54□□□□□ -1.2
TPM3-222ENST00000515609 TRAV1-1A0A0B4J248 108 aa7.54□□□□□ -1.2
TPM3-222ENST00000515609 A0A1W2PPV4 95 aa7.54□□□□□ -1.2
TPM3-222ENST00000515609 TEX22C9J3V5 150 aa7.54□□□□□ -1.2
TPM3-222ENST00000515609 H3BUX3 64 aa7.54□□□□□ -1.2
TPM3-222ENST00000515609 FCN1O00602 326 aa7.54□□□□□ -1.2
TPM3-222ENST00000515609 IFNA1P01562 189 aa7.54□□□□□ -1.2
TPM3-222ENST00000515609 CRYGCP07315 174 aa7.54□□□□□ -1.2
TPM3-222ENST00000515609 CTRB1P17538 263 aa7.54□□□□□ -1.2
TPM3-222ENST00000515609 M6PRP20645 277 aa7.54□□□□□ -1.2
TPM3-222ENST00000515609 MDKP21741 143 aaPredicted RBP7.54□□□□□ -1.2
TPM3-222ENST00000515609 CD24P25063 80 aa7.54□□□□□ -1.2
TPM3-222ENST00000515609 NPBWR1P48145 328 aa7.54□□□□□ -1.2
TPM3-222ENST00000515609 PPT1P50897 306 aa7.54□□□□□ -1.2
TPM3-222ENST00000515609 KLF17Q5JT82 389 aaPredicted RBP7.54□□□□□ -1.2
TPM3-222ENST00000515609 FAM209BQ5JX69 171 aa7.54□□□□□ -1.2
TPM3-222ENST00000515609 C10orf55Q5SWW7 151 aa7.54□□□□□ -1.2
TPM3-222ENST00000515609 CTRB2Q6GPI1 263 aa7.54□□□□□ -1.2
TPM3-222ENST00000515609 KRTAP1-3Q8IUG1 177 aa7.54□□□□□ -1.2
TPM3-222ENST00000515609 EIF4E3Q8N5X7 224 aaKnown RBP7.54□□□□□ -1.2
TPM3-222ENST00000515609 C5orf56Q8N8D9 126 aa7.54□□□□□ -1.2
TPM3-222ENST00000515609 WFDC11Q8NEX6 87 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms