RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 MALSU1Q96EH3 234 aa6.47□□□□□ -1.37
COL4A5-208ENST00000505728 RITA1Q96K30 269 aa6.47□□□□□ -1.37
COL4A5-208ENST00000505728 LINC00052Q96N35 136 aa6.47□□□□□ -1.37
COL4A5-208ENST00000505728 PBDC1Q9BVG4 233 aa6.47□□□□□ -1.37
COL4A5-208ENST00000505728 TMUB1Q9BVT8 246 aa6.47□□□□□ -1.37
COL4A5-208ENST00000505728 KRTAP3-3Q9BYR6 98 aa6.47□□□□□ -1.37
COL4A5-208ENST00000505728 KRTAP3-2Q9BYR7 98 aa6.47□□□□□ -1.37
COL4A5-208ENST00000505728 SMDT1Q9H4I9 107 aa6.47□□□□□ -1.37
COL4A5-208ENST00000505728 ZNF430Q9H8G1 570 aaPredicted RBP6.47□□□□□ -1.37
COL4A5-208ENST00000505728 LPAR2Q9HBW0 351 aa6.47□□□□□ -1.37
COL4A5-208ENST00000505728 TREM1Q9NP99 234 aa6.47□□□□□ -1.37
COL4A5-208ENST00000505728 SIGLEC9Q9Y336 463 aa6.47□□□□□ -1.37
COL4A5-208ENST00000505728 FAM157AC9JC47 383 aa6.46□□□□□ -1.38
COL4A5-208ENST00000505728 TIMM23O14925 209 aa6.46□□□□□ -1.38
COL4A5-208ENST00000505728 TSPAN9O75954 239 aa6.46□□□□□ -1.38
COL4A5-208ENST00000505728 ACTL6BO94805 426 aa6.46□□□□□ -1.38
COL4A5-208ENST00000505728 VENTXO95231 258 aa6.46□□□□□ -1.38
COL4A5-208ENST00000505728 MOSP00540 346 aa6.46□□□□□ -1.38
COL4A5-208ENST00000505728 OPN1MWP04001 364 aa6.46□□□□□ -1.38
COL4A5-208ENST00000505728 OPN1MW2P0DN77 364 aa6.46□□□□□ -1.38
COL4A5-208ENST00000505728 OPN1MW3P0DN78 364 aa6.46□□□□□ -1.38
COL4A5-208ENST00000505728 GPX4P36969 197 aaPredicted RBP6.46□□□□□ -1.38
COL4A5-208ENST00000505728 RPL27AP46776 148 aaKnown RBP6.46□□□□□ -1.38
COL4A5-208ENST00000505728 COMPP49747 757 aaPredicted RBP6.46□□□□□ -1.38
COL4A5-208ENST00000505728 FHITP49789 147 aa6.46□□□□□ -1.38
COL4A5-208ENST00000505728 PRB3Q04118 309 aaPredicted RBP6.46□□□□□ -1.38
COL4A5-208ENST00000505728 KLRD1Q13241 179 aa6.46□□□□□ -1.38
COL4A5-208ENST00000505728 EBI3Q14213 229 aa6.46□□□□□ -1.38
COL4A5-208ENST00000505728 GUK1Q16774 197 aa6.46□□□□□ -1.38
COL4A5-208ENST00000505728 MRGPRG-AS1Q2M3A8 158 aa6.46□□□□□ -1.38
COL4A5-208ENST00000505728 TUSC1Q2TAM9 212 aa6.46□□□□□ -1.38
COL4A5-208ENST00000505728 ACOT6Q3I5F7 207 aaPredicted RBP6.46□□□□□ -1.38
COL4A5-208ENST00000505728 LDLRAD2Q5SZI1 272 aa6.46□□□□□ -1.38
COL4A5-208ENST00000505728 SPSB3Q6PJ21 355 aa6.46□□□□□ -1.38
COL4A5-208ENST00000505728 TREML4Q6UXN2 200 aa6.46□□□□□ -1.38
COL4A5-208ENST00000505728 LHFPL4Q7Z7J7 247 aa6.46□□□□□ -1.38
COL4A5-208ENST00000505728 PPP1R27Q86WC6 154 aa6.46□□□□□ -1.38
COL4A5-208ENST00000505728 CCDC28AQ8IWP9 274 aa6.46□□□□□ -1.38
COL4A5-208ENST00000505728 NPBQ8NG41 125 aa6.46□□□□□ -1.38
COL4A5-208ENST00000505728 OR2T10Q8NGZ9 312 aa6.46□□□□□ -1.38
COL4A5-208ENST00000505728 CACNG8Q8WXS5 425 aa6.46□□□□□ -1.38
COL4A5-208ENST00000505728 CFHR4Q92496 578 aa6.46□□□□□ -1.38
COL4A5-208ENST00000505728 RBMXL1Q96E39 390 aaKnown RBP6.46□□□□□ -1.38
COL4A5-208ENST00000505728 TBX15Q96SF7 602 aa6.46□□□□□ -1.38
COL4A5-208ENST00000505728 SRSF8Q9BRL6 282 aaKnown RBP6.46□□□□□ -1.38
COL4A5-208ENST00000505728 NPCDR1Q9BY65 106 aa6.46□□□□□ -1.38
COL4A5-208ENST00000505728 KCNIP2Q9NS61 270 aa6.46□□□□□ -1.38
COL4A5-208ENST00000505728 RPRMQ9NS64 109 aa6.46□□□□□ -1.38
COL4A5-208ENST00000505728 KIAA1456Q9P272 454 aa6.46□□□□□ -1.38
COL4A5-208ENST00000505728 ABCA2Q9BZC7 2435 aa6.45□□□□□ -1.38
COL4A5-208ENST00000505728 IGHV4-61A0A0C4DH41 118 aa6.45□□□□□ -1.38
COL4A5-208ENST00000505728 SMCO3A2RU48 225 aa6.45□□□□□ -1.38
COL4A5-208ENST00000505728 CGB1A6NKQ9 187 aa6.45□□□□□ -1.38
COL4A5-208ENST00000505728 AGPAT2O15120 278 aa6.45□□□□□ -1.38
COL4A5-208ENST00000505728 NBR2O15453 112 aa6.45□□□□□ -1.38
COL4A5-208ENST00000505728 CYB5BO43169 146 aa6.45□□□□□ -1.38
COL4A5-208ENST00000505728 NDUFA3O95167 84 aa6.45□□□□□ -1.38
COL4A5-208ENST00000505728 SNRNP70P08621 437 aaKnown RBP6.45□□□□□ -1.38
COL4A5-208ENST00000505728 CD99P14209 185 aa6.45□□□□□ -1.38
COL4A5-208ENST00000505728 SLC25A16P16260 332 aa6.45□□□□□ -1.38
COL4A5-208ENST00000505728 CNTFRP26992 372 aa6.45□□□□□ -1.38
COL4A5-208ENST00000505728 OPRK1P41145 380 aa6.45□□□□□ -1.38
COL4A5-208ENST00000505728 RAB31Q13636 194 aa6.45□□□□□ -1.38
COL4A5-208ENST00000505728 PMS2P11Q13670 270 aa6.45□□□□□ -1.38
COL4A5-208ENST00000505728 FFAR4Q5NUL3 377 aa6.45□□□□□ -1.38
COL4A5-208ENST00000505728 C10orf91Q5T1B1 145 aa6.45□□□□□ -1.38
COL4A5-208ENST00000505728 PVRIGQ6DKI7 326 aa6.45□□□□□ -1.38
COL4A5-208ENST00000505728 TMEM144Q7Z5S9 345 aa6.45□□□□□ -1.38
COL4A5-208ENST00000505728 RNASEH2CQ8TDP1 164 aaKnown RBP6.45□□□□□ -1.38
COL4A5-208ENST00000505728 SFT2D1Q8WV19 159 aa6.45□□□□□ -1.38
COL4A5-208ENST00000505728 EAF1Q96JC9 268 aaPredicted RBP6.45□□□□□ -1.38
COL4A5-208ENST00000505728 FOXC2Q99958 501 aa6.45□□□□□ -1.38
COL4A5-208ENST00000505728 SCRT1Q9BWW7 348 aa6.45□□□□□ -1.38
COL4A5-208ENST00000505728 ACTR3CQ9C0K3 210 aaPredicted RBP6.45□□□□□ -1.38
COL4A5-208ENST00000505728 FBXL15Q9H469 300 aa6.45□□□□□ -1.38
COL4A5-208ENST00000505728 SLC39A9Q9NUM3 307 aa6.45□□□□□ -1.38
COL4A5-208ENST00000505728 METTL1Q9UBP6 276 aaKnown RBP6.45□□□□□ -1.38
COL4A5-208ENST00000505728 LSM4Q9Y4Z0 139 aaKnown RBP6.45□□□□□ -1.38
COL4A5-208ENST00000505728 HILPDAQ9Y5L2 63 aa6.45□□□□□ -1.38
COL4A5-208ENST00000505728 TLN2Q9Y4G6 2542 aa6.45□□□□□ -1.38
COL4A5-208ENST00000505728 IGHV4-30-2A0A087WSY4 118 aa6.44□□□□□ -1.38
COL4A5-208ENST00000505728 CTXND1A0A1B0GTU2 59 aa6.44□□□□□ -1.38
COL4A5-208ENST00000505728 A0A1W2PRD5 423 aa6.44□□□□□ -1.38
COL4A5-208ENST00000505728 A0A1W2PRF3 423 aa6.44□□□□□ -1.38
COL4A5-208ENST00000505728 A0A1W2PRM7 423 aa6.44□□□□□ -1.38
COL4A5-208ENST00000505728 E7EUB6 86 aa6.44□□□□□ -1.38
COL4A5-208ENST00000505728 IGKV1D-33P01593 117 aa6.44□□□□□ -1.38
COL4A5-208ENST00000505728 IGKV1-33P01594 117 aa6.44□□□□□ -1.38
COL4A5-208ENST00000505728 OR13C7P0DN81 318 aa6.44□□□□□ -1.38
COL4A5-208ENST00000505728 M6PRP20645 277 aa6.44□□□□□ -1.38
COL4A5-208ENST00000505728 BRS3P32247 399 aa6.44□□□□□ -1.38
COL4A5-208ENST00000505728 RPL29P47914 159 aaKnown RBP6.44□□□□□ -1.38
COL4A5-208ENST00000505728 ELLP55199 621 aaPredicted RBP6.44□□□□□ -1.38
COL4A5-208ENST00000505728 SRSF3P84103 164 aaKnown RBP6.44□□□□□ -1.38
COL4A5-208ENST00000505728 WT1-ASQ06250 92 aa6.44□□□□□ -1.38
COL4A5-208ENST00000505728 CD69Q07108 199 aa6.44□□□□□ -1.38
COL4A5-208ENST00000505728 SSX2Q16385 188 aa6.44□□□□□ -1.38
COL4A5-208ENST00000505728 TNXAQ16473 311 aa6.44□□□□□ -1.38
COL4A5-208ENST00000505728 ARSJQ5FYB0 599 aaPredicted RBP6.44□□□□□ -1.38
COL4A5-208ENST00000505728 ETFRF1Q6IPR1 90 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms