RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 TTTY13Q9BZ97 58 aa2.81□□□□□ -1.96
SNX13-211ENST00000496855 PBOV1Q9GZY1 135 aa2.81□□□□□ -1.96
SNX13-211ENST00000496855 TVP23BQ9NYZ1 205 aa2.81□□□□□ -1.96
SNX13-211ENST00000496855 MED11Q9P086 117 aa2.81□□□□□ -1.96
SNX13-211ENST00000496855 ICOSQ9Y6W8 199 aa2.81□□□□□ -1.96
SNX13-211ENST00000496855 DICER1Q9UPY3 1922 aaKnown RBP2.81□□□□□ -1.96
SNX13-211ENST00000496855 BCORL1Q5H9F3 1711 aa2.8□□□□□ -1.96
SNX13-211ENST00000496855 URB2Q14146 1524 aaKnown RBP2.8□□□□□ -1.96
SNX13-211ENST00000496855 CACNA1SQ13698 1873 aa2.8□□□□□ -1.96
SNX13-211ENST00000496855 NHSL1Q5SYE7 1610 aa2.8□□□□□ -1.96
SNX13-211ENST00000496855 TRAV9-1A0A075B6T8 112 aa2.8□□□□□ -1.96
SNX13-211ENST00000496855 LOC102725191A0A1B0GVB3 256 aa2.8□□□□□ -1.96
SNX13-211ENST00000496855 LEUTXA8MZ59 168 aa2.8□□□□□ -1.96
SNX13-211ENST00000496855 BUB1B-PAK6H3BSN5 160 aa2.8□□□□□ -1.96
SNX13-211ENST00000496855 H7BYZ3 331 aa2.8□□□□□ -1.96
SNX13-211ENST00000496855 SH2D1AO60880 128 aa2.8□□□□□ -1.96
SNX13-211ENST00000496855 BANF1O75531 89 aa2.8□□□□□ -1.96
SNX13-211ENST00000496855 NPPCP23582 126 aa2.8□□□□□ -1.96
SNX13-211ENST00000496855 GABRA2P47869 451 aa2.8□□□□□ -1.96
SNX13-211ENST00000496855 POLR2HP52434 150 aaKnown RBP2.8□□□□□ -1.96
SNX13-211ENST00000496855 EMP1P54849 157 aa2.8□□□□□ -1.96
SNX13-211ENST00000496855 RPL30P62888 115 aaKnown RBP2.8□□□□□ -1.96
SNX13-211ENST00000496855 UBE2SQ16763 222 aa2.8□□□□□ -1.96
SNX13-211ENST00000496855 OR4D11Q8NGI4 311 aa2.8□□□□□ -1.96
SNX13-211ENST00000496855 DCANP1Q8TF63 244 aa2.8□□□□□ -1.96
SNX13-211ENST00000496855 SCRT1Q9BWW7 348 aa2.8□□□□□ -1.96
SNX13-211ENST00000496855 NUBP2Q9Y5Y2 271 aa2.8□□□□□ -1.96
SNX13-211ENST00000496855 UNC79Q9P2D8 2635 aa2.8□□□□□ -1.96
SNX13-211ENST00000496855 SCN1AP35498 2009 aa2.8□□□□□ -1.96
SNX13-211ENST00000496855 PREX1Q8TCU6 1659 aa2.8□□□□□ -1.96
SNX13-211ENST00000496855 IFT140Q96RY7 1462 aa2.79□□□□□ -1.96
SNX13-211ENST00000496855 SPRR5A0A1B0GTR4 108 aa2.79□□□□□ -1.96
SNX13-211ENST00000496855 MDFIC2A0A1B0GVS7 189 aa2.79□□□□□ -1.96
SNX13-211ENST00000496855 TMEM269A0A1B0GVZ9 245 aa2.79□□□□□ -1.96
SNX13-211ENST00000496855 LRCOL1A6NCL2 159 aa2.79□□□□□ -1.96
SNX13-211ENST00000496855 C16orf90A8MZG2 172 aa2.79□□□□□ -1.96
SNX13-211ENST00000496855 AIPO00170 330 aa2.79□□□□□ -1.96
SNX13-211ENST00000496855 SLC17A3O00476 420 aa2.79□□□□□ -1.96
SNX13-211ENST00000496855 DEGS1O15121 323 aa2.79□□□□□ -1.96
SNX13-211ENST00000496855 SLC25A20O43772 301 aa2.79□□□□□ -1.96
SNX13-211ENST00000496855 ZNF73O43830 326 aaPredicted RBP2.79□□□□□ -1.96
SNX13-211ENST00000496855 SRP9P49458 86 aaKnown RBP2.79□□□□□ -1.96
SNX13-211ENST00000496855 RAB13P51153 203 aa2.79□□□□□ -1.96
SNX13-211ENST00000496855 KRTAP10-10P60014 251 aa2.79□□□□□ -1.96
SNX13-211ENST00000496855 AP1S1P61966 158 aa2.79□□□□□ -1.96
SNX13-211ENST00000496855 OR8B8Q15620 311 aa2.79□□□□□ -1.96
SNX13-211ENST00000496855 AMTNQ6UX39 209 aa2.79□□□□□ -1.96
SNX13-211ENST00000496855 ADAT3Q96EY9 351 aaPredicted RBP2.79□□□□□ -1.96
SNX13-211ENST00000496855 HSPB9Q9BQS6 159 aa2.79□□□□□ -1.96
SNX13-211ENST00000496855 DERL1Q9BUN8 251 aa2.79□□□□□ -1.96
SNX13-211ENST00000496855 PCTPQ9UKL6 214 aa2.79□□□□□ -1.96
SNX13-211ENST00000496855 BRWD3Q6RI45 1802 aa2.79□□□□□ -1.96
SNX13-211ENST00000496855 UTRNP46939 3433 aa2.79□□□□□ -1.96
SNX13-211ENST00000496855 NID2Q14112 1375 aa2.79□□□□□ -1.96
SNX13-211ENST00000496855 DOCK9Q9BZ29 2069 aa2.79□□□□□ -1.96
SNX13-211ENST00000496855 EP400Q96L91 3159 aa2.79□□□□□ -1.96
SNX13-211ENST00000496855 ZNF106Q9H2Y7 1883 aaKnown RBP2.79□□□□□ -1.96
SNX13-211ENST00000496855 REREQ9P2R6 1566 aa2.79□□□□□ -1.96
SNX13-211ENST00000496855 A0A0B4J2C4 111 aa2.78□□□□□ -1.96
SNX13-211ENST00000496855 LINC00587B1AMM8 73 aa2.78□□□□□ -1.96
SNX13-211ENST00000496855 PGLYRP1O75594 196 aaPredicted RBP2.78□□□□□ -1.96
SNX13-211ENST00000496855 INSL3P51460 131 aa2.78□□□□□ -1.96
SNX13-211ENST00000496855 CCL20P78556 96 aa2.78□□□□□ -1.96
SNX13-211ENST00000496855 HTR4Q13639 388 aa2.78□□□□□ -1.96
SNX13-211ENST00000496855 FAM229BQ4G0N7 80 aa2.78□□□□□ -1.96
SNX13-211ENST00000496855 AADACL3Q5VUY0 350 aa2.78□□□□□ -1.96
SNX13-211ENST00000496855 ZFAND6Q6FIF0 208 aa2.78□□□□□ -1.96
SNX13-211ENST00000496855 KTN1-AS1Q86SY8 53 aa2.78□□□□□ -1.96
SNX13-211ENST00000496855 CLVS1Q8IUQ0 354 aaPredicted RBP2.78□□□□□ -1.96
SNX13-211ENST00000496855 OR9Q1Q8NGQ5 310 aa2.78□□□□□ -1.96
SNX13-211ENST00000496855 UBALD1Q8TB05 177 aa2.78□□□□□ -1.96
SNX13-211ENST00000496855 LZICQ8WZA0 190 aa2.78□□□□□ -1.96
SNX13-211ENST00000496855 HIST1H2BAQ96A08 127 aa2.78□□□□□ -1.96
SNX13-211ENST00000496855 MALSU1Q96EH3 234 aa2.78□□□□□ -1.96
SNX13-211ENST00000496855 CGREF1Q99674 301 aa2.78□□□□□ -1.96
SNX13-211ENST00000496855 SEC22CQ9BRL7 303 aa2.78□□□□□ -1.96
SNX13-211ENST00000496855 DOHHQ9BU89 302 aa2.78□□□□□ -1.96
SNX13-211ENST00000496855 CCDC32Q9BV29 185 aa2.78□□□□□ -1.96
SNX13-211ENST00000496855 OR8D2Q9GZM6 311 aa2.78□□□□□ -1.96
SNX13-211ENST00000496855 IL36BQ9NZH7 164 aa2.78□□□□□ -1.96
SNX13-211ENST00000496855 FUT9Q9Y231 359 aa2.78□□□□□ -1.96
SNX13-211ENST00000496855 PCM1Q15154 2024 aa2.78□□□□□ -1.96
SNX13-211ENST00000496855 TECPR2O15040 1411 aa2.78□□□□□ -1.96
SNX13-211ENST00000496855 COL18A1P39060 1754 aa2.78□□□□□ -1.97
SNX13-211ENST00000496855 TRBV24-1A0A075B6N3 115 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 A0A0D9SEW6 157 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 J3QRK9 145 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 IFNA7P01567 189 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 PRM2P04554 102 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 ZNF286BP0CG31 522 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 CCL5P13501 91 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 ATP6V0CP27449 155 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 PSMB8P28062 276 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 LPAR6P43657 344 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 EVX1P49640 407 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 GTF2A1P52655 376 aaPredicted RBP2.77□□□□□ -1.97
SNX13-211ENST00000496855 RPS28P62857 69 aaKnown RBP2.77□□□□□ -1.97
SNX13-211ENST00000496855 ZNF816Q0VGE8 651 aaPredicted RBP2.77□□□□□ -1.97
SNX13-211ENST00000496855 KISS1Q15726 138 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 LDLRAD2Q5SZI1 272 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms