RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 C5orf66Q9H5L9 145 aa10.04□□□□□ -0.8
CTDSP1-212ENST00000494067 SCPEP1Q9HB40 452 aa10.04□□□□□ -0.8
CTDSP1-212ENST00000494067 DAZ1Q9NQZ3 744 aaKnown RBP10.04□□□□□ -0.8
CTDSP1-212ENST00000494067 NDUFA4L2Q9NRX3 87 aa10.04□□□□□ -0.8
CTDSP1-212ENST00000494067 C21orf62Q9NYP8 219 aa10.04□□□□□ -0.8
CTDSP1-212ENST00000494067 DNAH1Q9P2D7 4330 aa10.03□□□□□ -0.8
CTDSP1-212ENST00000494067 F8W735 103 aaPredicted RBP10.03□□□□□ -0.8
CTDSP1-212ENST00000494067 NDUFA4O00483 81 aa10.03□□□□□ -0.8
CTDSP1-212ENST00000494067 HPGDSO60760 199 aa10.03□□□□□ -0.8
CTDSP1-212ENST00000494067 IGKV1-39P01597 117 aa10.03□□□□□ -0.8
CTDSP1-212ENST00000494067 IGKV1D-39P04432 117 aa10.03□□□□□ -0.8
CTDSP1-212ENST00000494067 C8orf88P0DMB2 117 aa10.03□□□□□ -0.8
CTDSP1-212ENST00000494067 ELK1P19419 428 aa10.03□□□□□ -0.8
CTDSP1-212ENST00000494067 RCVRNP35243 200 aa10.03□□□□□ -0.8
CTDSP1-212ENST00000494067 RELQ04864 619 aaPredicted RBP10.03□□□□□ -0.8
CTDSP1-212ENST00000494067 PHLDA2Q53GA4 152 aa10.03□□□□□ -0.8
CTDSP1-212ENST00000494067 MZT2AQ6P582 158 aa10.03□□□□□ -0.8
CTDSP1-212ENST00000494067 H2BFWTQ7Z2G1 175 aa10.03□□□□□ -0.8
CTDSP1-212ENST00000494067 OR4A16Q8NH70 328 aa10.03□□□□□ -0.8
CTDSP1-212ENST00000494067 C20orf24Q9BUV8 137 aa10.03□□□□□ -0.8
CTDSP1-212ENST00000494067 FAM212BQ9NTI7 297 aaPredicted RBP10.03□□□□□ -0.8
CTDSP1-212ENST00000494067 IGHV3-21A0A0B4J1V1 117 aa10.02□□□□□ -0.81
CTDSP1-212ENST00000494067 NUPL2O15504 423 aaKnown RBP10.02□□□□□ -0.81
CTDSP1-212ENST00000494067 RORCP51449 518 aa10.02□□□□□ -0.81
CTDSP1-212ENST00000494067 APOC4P55056 127 aa10.02□□□□□ -0.81
CTDSP1-212ENST00000494067 SNX29P2Q8IUI4 249 aa10.02□□□□□ -0.81
CTDSP1-212ENST00000494067 SCARB1Q8WTV0 552 aa10.02□□□□□ -0.81
CTDSP1-212ENST00000494067 TMEM190Q8WZ59 177 aa10.02□□□□□ -0.81
CTDSP1-212ENST00000494067 HYDINQ4G0P3 5121 aa10.01□□□□□ -0.81
CTDSP1-212ENST00000494067 FAM25AB3EWG3 89 aa10.01□□□□□ -0.81
CTDSP1-212ENST00000494067 FAM25CB3EWG5 89 aa10.01□□□□□ -0.81
CTDSP1-212ENST00000494067 FAM25GB3EWG6 89 aa10.01□□□□□ -0.81
CTDSP1-212ENST00000494067 K7EMT4 169 aa10.01□□□□□ -0.81
CTDSP1-212ENST00000494067 UCP3P55916 312 aa10.01□□□□□ -0.81
CTDSP1-212ENST00000494067 ERHP84090 104 aaKnown RBP10.01□□□□□ -0.81
CTDSP1-212ENST00000494067 RNASE12Q5GAN4 147 aaKnown RBP10.01□□□□□ -0.81
CTDSP1-212ENST00000494067 TBC1D26Q86UD7 250 aa10.01□□□□□ -0.81
CTDSP1-212ENST00000494067 OR1P1Q8NH06 330 aa10.01□□□□□ -0.81
CTDSP1-212ENST00000494067 AP3S1Q92572 193 aa10.01□□□□□ -0.81
CTDSP1-212ENST00000494067 OR4C46A6NHA9 309 aa10□□□□□ -0.81
CTDSP1-212ENST00000494067 C15orf61A6NNL5 157 aa10□□□□□ -0.81
CTDSP1-212ENST00000494067 M0QYG6 137 aa10□□□□□ -0.81
CTDSP1-212ENST00000494067 UBE2CO00762 179 aa10□□□□□ -0.81
CTDSP1-212ENST00000494067 TSPAN4O14817 238 aa10□□□□□ -0.81
CTDSP1-212ENST00000494067 ATG12O94817 140 aa10□□□□□ -0.81
CTDSP1-212ENST00000494067 MFAP4P55083 255 aa10□□□□□ -0.81
CTDSP1-212ENST00000494067 CMC4P56277 68 aaPredicted RBP10□□□□□ -0.81
CTDSP1-212ENST00000494067 CTF1Q16619 201 aa10□□□□□ -0.81
CTDSP1-212ENST00000494067 C15orf40Q8WUR7 153 aa10□□□□□ -0.81
CTDSP1-212ENST00000494067 MISP3Q96FF7 219 aa10□□□□□ -0.81
CTDSP1-212ENST00000494067 TXN2Q99757 166 aa10□□□□□ -0.81
CTDSP1-212ENST00000494067 CHRDL1Q9BU40 450 aa10□□□□□ -0.81
CTDSP1-212ENST00000494067 C6orf62Q9GZU0 229 aaPredicted RBP10□□□□□ -0.81
CTDSP1-212ENST00000494067 TMEM14BQ9NUH8 114 aa10□□□□□ -0.81
CTDSP1-212ENST00000494067 IGHV3OR16-8A0A075B7F1 116 aa9.99□□□□□ -0.81
CTDSP1-212ENST00000494067 C15orf62A8K5M9 175 aa9.99□□□□□ -0.81
CTDSP1-212ENST00000494067 K7EIM0 57 aa9.99□□□□□ -0.81
CTDSP1-212ENST00000494067 YIF1AO95070 293 aa9.99□□□□□ -0.81
CTDSP1-212ENST00000494067 PGAM2P15259 253 aa9.99□□□□□ -0.81
CTDSP1-212ENST00000494067 BMI1P35226 326 aa9.99□□□□□ -0.81
CTDSP1-212ENST00000494067 ADMP35318 185 aa9.99□□□□□ -0.81
CTDSP1-212ENST00000494067 IZUMO4Q1ZYL8 232 aa9.99□□□□□ -0.81
CTDSP1-212ENST00000494067 ZNF486Q96H40 463 aaPredicted RBP9.99□□□□□ -0.81
CTDSP1-212ENST00000494067 SEC22AQ96IW7 307 aa9.99□□□□□ -0.81
CTDSP1-212ENST00000494067 PDCD10Q9BUL8 212 aa9.99□□□□□ -0.81
CTDSP1-212ENST00000494067 UBQLN2Q9UHD9 624 aa9.99□□□□□ -0.81
CTDSP1-212ENST00000494067 GNG7O60262 68 aa9.98□□□□□ -0.81
CTDSP1-212ENST00000494067 GABARAPO95166 117 aa9.98□□□□□ -0.81
CTDSP1-212ENST00000494067 HSPE1P61604 102 aaKnown RBP9.98□□□□□ -0.81
CTDSP1-212ENST00000494067 PRCDQ00LT1 54 aa9.98□□□□□ -0.81
CTDSP1-212ENST00000494067 RNASE10Q5GAN6 216 aaKnown RBP9.98□□□□□ -0.81
CTDSP1-212ENST00000494067 Q6ZWC4 215 aa9.98□□□□□ -0.81
CTDSP1-212ENST00000494067 STPG3Q8N7X2 389 aa9.98□□□□□ -0.81
CTDSP1-212ENST00000494067 MRGPRFQ96AM1 343 aa9.98□□□□□ -0.81
CTDSP1-212ENST00000494067 KLK11Q9UBX7 282 aa9.98□□□□□ -0.81
CTDSP1-212ENST00000494067 TP53TG1Q9Y2A0 90 aa9.98□□□□□ -0.81
CTDSP1-212ENST00000494067 EPPK1P58107 5090 aaKnown RBP9.97□□□□□ -0.81
CTDSP1-212ENST00000494067 SPRY2O43597 315 aa9.97□□□□□ -0.81
CTDSP1-212ENST00000494067 ZNF207O43670 478 aaKnown RBP9.97□□□□□ -0.81
CTDSP1-212ENST00000494067 CTSDP07339 412 aaPredicted RBP9.97□□□□□ -0.81
CTDSP1-212ENST00000494067 PI3P19957 117 aa9.97□□□□□ -0.81
CTDSP1-212ENST00000494067 SNCAP37840 140 aa9.97□□□□□ -0.81
CTDSP1-212ENST00000494067 SUB1P53999 127 aaKnown RBP eCLIP9.97□□□□□ -0.81
CTDSP1-212ENST00000494067 PAFAH1B2P68402 229 aa9.97□□□□□ -0.81
CTDSP1-212ENST00000494067 ARRDC1Q8N5I2 433 aa9.97□□□□□ -0.81
CTDSP1-212ENST00000494067 TMEM116Q8NCL8 245 aa9.97□□□□□ -0.81
CTDSP1-212ENST00000494067 OR4D10Q8NGI6 311 aa9.97□□□□□ -0.81
CTDSP1-212ENST00000494067 OR52I2Q8NH67 350 aa9.97□□□□□ -0.81
CTDSP1-212ENST00000494067 ZFAND1Q8TCF1 268 aa9.97□□□□□ -0.81
CTDSP1-212ENST00000494067 PINX1Q96BK5 328 aaKnown RBP9.97□□□□□ -0.81
CTDSP1-212ENST00000494067 ABHD1Q96SE0 405 aa9.97□□□□□ -0.81
CTDSP1-212ENST00000494067 OVOL2Q9BRP0 275 aa9.97□□□□□ -0.81
CTDSP1-212ENST00000494067 GINS3Q9BRX5 216 aa9.97□□□□□ -0.81
CTDSP1-212ENST00000494067 MIXL1Q9H2W2 232 aa9.97□□□□□ -0.81
CTDSP1-212ENST00000494067 TRAV14DV4A0A0A6YYC5 116 aa9.96□□□□□ -0.82
CTDSP1-212ENST00000494067 KIR2DL5BA0A0G2JN68 375 aa9.96□□□□□ -0.82
CTDSP1-212ENST00000494067 KIR2DL5BA0A0G2JPC4 375 aa9.96□□□□□ -0.82
CTDSP1-212ENST00000494067 CORTO00230 105 aa9.96□□□□□ -0.82
CTDSP1-212ENST00000494067 SCGB2A1O75556 95 aa9.96□□□□□ -0.82
CTDSP1-212ENST00000494067 MT-CO2P00403 227 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms