RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 RPL23AP62750 156 aaKnown RBP17.1■□□□□ 0.33
VCPKMT-204ENST00000491402 TMEM95Q3KNT9 176 aa17.1■□□□□ 0.33
VCPKMT-204ENST00000491402 SPANXN5Q5MJ07 72 aa17.1■□□□□ 0.33
VCPKMT-204ENST00000491402 Q8N2B8 174 aa17.1■□□□□ 0.33
VCPKMT-204ENST00000491402 SLC24A4Q8NFF2 622 aa17.1■□□□□ 0.33
VCPKMT-204ENST00000491402 TAF15Q92804 592 aaKnown RBP eCLIP17.1■□□□□ 0.33
VCPKMT-204ENST00000491402 LYRM2Q9NU23 88 aaPredicted RBP17.1■□□□□ 0.33
VCPKMT-204ENST00000491402 LINC00527Q9UJ94 153 aa17.1■□□□□ 0.33
VCPKMT-204ENST00000491402 U3KQ87 197 aa17.1■□□□□ 0.33
VCPKMT-204ENST00000491402 FBN1P35555 2871 aaKnown RBP17.1■□□□□ 0.33
VCPKMT-204ENST00000491402 G3V318 75 aa17.1■□□□□ 0.33
VCPKMT-204ENST00000491402 TSC22D2O75157 780 aa17.1■□□□□ 0.33
VCPKMT-204ENST00000491402 SNCAP37840 140 aa17.1■□□□□ 0.33
VCPKMT-204ENST00000491402 P2RY1P47900 373 aa17.1■□□□□ 0.33
VCPKMT-204ENST00000491402 RIPPLY3P57055 190 aa17.1■□□□□ 0.33
VCPKMT-204ENST00000491402 BSXQ3C1V8 233 aa17.1■□□□□ 0.33
VCPKMT-204ENST00000491402 ZFP69Q49AA0 526 aa17.1■□□□□ 0.33
VCPKMT-204ENST00000491402 AKIRIN2Q53H80 203 aa17.1■□□□□ 0.33
VCPKMT-204ENST00000491402 UNQ5815/PRO19632Q6UWF5 114 aa17.1■□□□□ 0.33
VCPKMT-204ENST00000491402 NOL4LQ96MY1 436 aaPredicted RBP17.1■□□□□ 0.33
VCPKMT-204ENST00000491402 IFNA10P01566 189 aa17.09■□□□□ 0.33
VCPKMT-204ENST00000491402 CRYBA1P05813 215 aa17.09■□□□□ 0.33
VCPKMT-204ENST00000491402 HTR2BP41595 481 aa17.09■□□□□ 0.33
VCPKMT-204ENST00000491402 TMEM267Q0VDI3 215 aaPredicted RBP17.09■□□□□ 0.33
VCPKMT-204ENST00000491402 TRAV41A0A0B4J266 112 aa17.08■□□□□ 0.33
VCPKMT-204ENST00000491402 CTRB1P17538 263 aa17.08■□□□□ 0.33
VCPKMT-204ENST00000491402 ARSJQ5FYB0 599 aaPredicted RBP17.08■□□□□ 0.33
VCPKMT-204ENST00000491402 CTRB2Q6GPI1 263 aa17.08■□□□□ 0.33
VCPKMT-204ENST00000491402 C19orf35Q6ZS72 473 aa17.08■□□□□ 0.33
VCPKMT-204ENST00000491402 Q6ZSV7 163 aa17.08■□□□□ 0.33
VCPKMT-204ENST00000491402 ZNF546Q86UE3 836 aa17.08■□□□□ 0.33
VCPKMT-204ENST00000491402 ZNF114Q8NC26 417 aa17.08■□□□□ 0.33
VCPKMT-204ENST00000491402 TMEM68Q96MH6 324 aa17.08■□□□□ 0.33
VCPKMT-204ENST00000491402 OR4C12Q96R67 309 aa17.08■□□□□ 0.33
VCPKMT-204ENST00000491402 STRAPQ9Y3F4 350 aaKnown RBP17.08■□□□□ 0.33
VCPKMT-204ENST00000491402 FAM24AA6NFZ4 105 aa17.07■□□□□ 0.32
VCPKMT-204ENST00000491402 C15orf62A8K5M9 175 aa17.07■□□□□ 0.32
VCPKMT-204ENST00000491402 NPIPB5A8MRT5 1133 aa17.07■□□□□ 0.32
VCPKMT-204ENST00000491402 RNASE2P10153 161 aaKnown RBP17.07■□□□□ 0.32
VCPKMT-204ENST00000491402 NPY1RP25929 384 aa17.07■□□□□ 0.32
VCPKMT-204ENST00000491402 RPP30P78346 268 aaKnown RBP17.07■□□□□ 0.32
VCPKMT-204ENST00000491402 C19orf54Q5BKX5 351 aa17.07■□□□□ 0.32
VCPKMT-204ENST00000491402 TMEM65Q6PI78 240 aa17.07■□□□□ 0.32
VCPKMT-204ENST00000491402 TTC9CQ8N5M4 171 aa17.07■□□□□ 0.32
VCPKMT-204ENST00000491402 TMEM170AQ8WVE7 144 aa17.07■□□□□ 0.32
VCPKMT-204ENST00000491402 P2RX4Q99571 388 aa17.07■□□□□ 0.32
VCPKMT-204ENST00000491402 ZNF580Q9UK33 172 aa17.07■□□□□ 0.32
VCPKMT-204ENST00000491402 ARPC5O15511 151 aa17.07■□□□□ 0.32
VCPKMT-204ENST00000491402 FBXO24O75426 580 aa17.07■□□□□ 0.32
VCPKMT-204ENST00000491402 TSPAN9O75954 239 aa17.07■□□□□ 0.32
VCPKMT-204ENST00000491402 CRYGCP07315 174 aa17.07■□□□□ 0.32
VCPKMT-204ENST00000491402 STPG2Q8N412 459 aa17.07■□□□□ 0.32
VCPKMT-204ENST00000491402 HYLS1Q96M11 299 aa17.07■□□□□ 0.32
VCPKMT-204ENST00000491402 TNFSF18Q9UNG2 199 aa17.07■□□□□ 0.32
VCPKMT-204ENST00000491402 C2orf83Q53S99 150 aa17.06■□□□□ 0.32
VCPKMT-204ENST00000491402 TMEM14EPQ6UXP3 125 aa17.06■□□□□ 0.32
VCPKMT-204ENST00000491402 NOXA1Q86UR1 476 aa17.06■□□□□ 0.32
VCPKMT-204ENST00000491402 TMEM252Q8N6L7 170 aa17.06■□□□□ 0.32
VCPKMT-204ENST00000491402 OR5T1Q8NG75 326 aa17.06■□□□□ 0.32
VCPKMT-204ENST00000491402 OR2T6Q8NHC8 308 aa17.06■□□□□ 0.32
VCPKMT-204ENST00000491402 PAIP2BQ9ULR5 123 aaKnown RBP17.06■□□□□ 0.32
VCPKMT-204ENST00000491402 F11RQ9Y624 299 aaKnown RBP17.06■□□□□ 0.32
VCPKMT-204ENST00000491402 IGSF23A1L1A6 192 aa17.05■□□□□ 0.32
VCPKMT-204ENST00000491402 HMSDA8MTL9 139 aa17.05■□□□□ 0.32
VCPKMT-204ENST00000491402 KRTAP24-1Q3LI83 254 aa17.05■□□□□ 0.32
VCPKMT-204ENST00000491402 OR1P1Q8NH06 330 aa17.05■□□□□ 0.32
VCPKMT-204ENST00000491402 FAM110DQ8TAY7 271 aaPredicted RBP17.05■□□□□ 0.32
VCPKMT-204ENST00000491402 WNT10AQ9GZT5 417 aa17.05■□□□□ 0.32
VCPKMT-204ENST00000491402 COL6A5A8TX70 2615 aa17.05■□□□□ 0.32
VCPKMT-204ENST00000491402 METTL15P1P0C7V9 234 aa17.05■□□□□ 0.32
VCPKMT-204ENST00000491402 HKR1P10072 659 aa17.05■□□□□ 0.32
VCPKMT-204ENST00000491402 DEFA4P12838 97 aa17.05■□□□□ 0.32
VCPKMT-204ENST00000491402 RPL12P30050 165 aaKnown RBP17.05■□□□□ 0.32
VCPKMT-204ENST00000491402 SUB1P53999 127 aaKnown RBP eCLIP17.05■□□□□ 0.32
VCPKMT-204ENST00000491402 ATP5IP56385 69 aaPredicted RBP17.05■□□□□ 0.32
VCPKMT-204ENST00000491402 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.05■□□□□ 0.32
VCPKMT-204ENST00000491402 INO80EQ8NBZ0 244 aaPredicted RBP17.05■□□□□ 0.32
VCPKMT-204ENST00000491402 RNF222A6NCQ9 220 aa17.04■□□□□ 0.32
VCPKMT-204ENST00000491402 BOLA2-SMG1P6H3BVE0 249 aa17.04■□□□□ 0.32
VCPKMT-204ENST00000491402 SOX15O60248 233 aa17.04■□□□□ 0.32
VCPKMT-204ENST00000491402 PPIFP30405 207 aaKnown RBP17.04■□□□□ 0.32
VCPKMT-204ENST00000491402 MFAP2P55001 183 aa17.04■□□□□ 0.32
VCPKMT-204ENST00000491402 AQP10Q96PS8 301 aa17.04■□□□□ 0.32
VCPKMT-204ENST00000491402 SLC25A31Q9H0C2 315 aa17.04■□□□□ 0.32
VCPKMT-204ENST00000491402 SERTAD4Q9NUC0 356 aa17.04■□□□□ 0.32
VCPKMT-204ENST00000491402 DMRT1Q9Y5R6 373 aa17.04■□□□□ 0.32
VCPKMT-204ENST00000491402 CST7O76096 145 aa17.03■□□□□ 0.32
VCPKMT-204ENST00000491402 PRH1P02810 166 aa17.03■□□□□ 0.32
VCPKMT-204ENST00000491402 OR8U8P0C7N1 319 aa17.03■□□□□ 0.32
VCPKMT-204ENST00000491402 RAB11AP62491 216 aa17.03■□□□□ 0.32
VCPKMT-204ENST00000491402 EWSR1Q01844 656 aaKnown RBP eCLIP17.03■□□□□ 0.32
VCPKMT-204ENST00000491402 CFHR3Q02985 330 aa17.03■□□□□ 0.32
VCPKMT-204ENST00000491402 STX12Q86Y82 276 aa17.03■□□□□ 0.32
VCPKMT-204ENST00000491402 PMS2P5A8MQ11 134 aa17.02■□□□□ 0.32
VCPKMT-204ENST00000491402 IFNA4P05014 189 aa17.02■□□□□ 0.32
VCPKMT-204ENST00000491402 NUP62P37198 522 aaPredicted RBP17.02■□□□□ 0.32
VCPKMT-204ENST00000491402 SULT1A1P50225 295 aa17.02■□□□□ 0.32
VCPKMT-204ENST00000491402 PVRIGQ6DKI7 326 aa17.02■□□□□ 0.32
VCPKMT-204ENST00000491402 MFFQ9GZY8 342 aa17.02■□□□□ 0.32
VCPKMT-204ENST00000491402 HNRNPCP07910 306 aaKnown RBP eCLIP17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms