RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 OR8U8P0C7N1 319 aa9.61□□□□□ -0.87
HLA-DOB-209ENST00000488325 METTL15P1P0C7V9 234 aa9.61□□□□□ -0.87
HLA-DOB-209ENST00000488325 TMEM11P17152 192 aa9.61□□□□□ -0.87
HLA-DOB-209ENST00000488325 DYNLT3P51808 116 aa9.61□□□□□ -0.87
HLA-DOB-209ENST00000488325 ERHP84090 104 aaKnown RBP9.61□□□□□ -0.87
HLA-DOB-209ENST00000488325 EXOSC2Q13868 293 aaKnown RBP9.61□□□□□ -0.87
HLA-DOB-209ENST00000488325 ATP6V1FQ16864 119 aa9.61□□□□□ -0.87
HLA-DOB-209ENST00000488325 PPP1R27Q86WC6 154 aa9.61□□□□□ -0.87
HLA-DOB-209ENST00000488325 BAP18Q8IXM2 172 aa9.61□□□□□ -0.87
HLA-DOB-209ENST00000488325 DYNAPQ8N1N2 210 aa9.61□□□□□ -0.87
HLA-DOB-209ENST00000488325 TEX29Q8N6K0 151 aa9.61□□□□□ -0.87
HLA-DOB-209ENST00000488325 NPBQ8NG41 125 aa9.61□□□□□ -0.87
HLA-DOB-209ENST00000488325 OR5C1Q8NGR4 320 aa9.61□□□□□ -0.87
HLA-DOB-209ENST00000488325 SCARB1Q8WTV0 552 aa9.61□□□□□ -0.87
HLA-DOB-209ENST00000488325 PINX1Q96BK5 328 aaKnown RBP9.61□□□□□ -0.87
HLA-DOB-209ENST00000488325 OR4C12Q96R67 309 aa9.61□□□□□ -0.87
HLA-DOB-209ENST00000488325 NDUFA4L2Q9NRX3 87 aa9.61□□□□□ -0.87
HLA-DOB-209ENST00000488325 FAM96BQ9Y3D0 163 aa9.61□□□□□ -0.87
HLA-DOB-209ENST00000488325 IGHV3OR16-10A0A075B7F0 116 aa9.6□□□□□ -0.87
HLA-DOB-209ENST00000488325 C15orf62A8K5M9 175 aa9.6□□□□□ -0.87
HLA-DOB-209ENST00000488325 INS-IGF2F8WCM5 200 aa9.6□□□□□ -0.87
HLA-DOB-209ENST00000488325 IFNA5P01569 189 aa9.6□□□□□ -0.87
HLA-DOB-209ENST00000488325 CNTFRP26992 372 aa9.6□□□□□ -0.87
HLA-DOB-209ENST00000488325 HTR2BP41595 481 aa9.6□□□□□ -0.87
HLA-DOB-209ENST00000488325 RPL27AP46776 148 aaKnown RBP9.6□□□□□ -0.87
HLA-DOB-209ENST00000488325 RAB14P61106 215 aa9.6□□□□□ -0.87
HLA-DOB-209ENST00000488325 HNF4GQ14541 408 aa9.6□□□□□ -0.87
HLA-DOB-209ENST00000488325 TNXAQ16473 311 aa9.6□□□□□ -0.87
HLA-DOB-209ENST00000488325 RUSC1-AS1Q66K80 236 aa9.6□□□□□ -0.87
HLA-DOB-209ENST00000488325 RPL7L1Q6DKI1 246 aaKnown RBP9.6□□□□□ -0.87
HLA-DOB-209ENST00000488325 HSD17B13Q7Z5P4 300 aaPredicted RBP9.6□□□□□ -0.87
HLA-DOB-209ENST00000488325 C1QL4Q86Z23 238 aa9.6□□□□□ -0.87
HLA-DOB-209ENST00000488325 LILRB2Q8N423 598 aa9.6□□□□□ -0.87
HLA-DOB-209ENST00000488325 TMEM217Q8N7C4 229 aa9.6□□□□□ -0.87
HLA-DOB-209ENST00000488325 UBAC2Q8NBM4 344 aa9.6□□□□□ -0.87
HLA-DOB-209ENST00000488325 SLC24A4Q8NFF2 622 aa9.6□□□□□ -0.87
HLA-DOB-209ENST00000488325 OR10P1Q8NGE3 313 aa9.6□□□□□ -0.87
HLA-DOB-209ENST00000488325 C17orf50Q8WW18 174 aa9.6□□□□□ -0.87
HLA-DOB-209ENST00000488325 AJUBAQ96IF1 538 aa9.6□□□□□ -0.87
HLA-DOB-209ENST00000488325 RITA1Q96K30 269 aa9.6□□□□□ -0.87
HLA-DOB-209ENST00000488325 ATP5SQ99766 215 aa9.6□□□□□ -0.87
HLA-DOB-209ENST00000488325 MEGF9Q9H1U4 602 aa9.6□□□□□ -0.87
HLA-DOB-209ENST00000488325 CFDP00746 253 aaPredicted RBP9.59□□□□□ -0.87
HLA-DOB-209ENST00000488325 FBP1P09467 338 aa9.59□□□□□ -0.87
HLA-DOB-209ENST00000488325 IGHV4-38-2P0DP08 117 aa9.59□□□□□ -0.87
HLA-DOB-209ENST00000488325 NPY1RP25929 384 aa9.59□□□□□ -0.87
HLA-DOB-209ENST00000488325 SUB1P53999 127 aaKnown RBP eCLIP9.59□□□□□ -0.87
HLA-DOB-209ENST00000488325 SLC38A11Q08AI6 406 aa9.59□□□□□ -0.87
HLA-DOB-209ENST00000488325 CLINT1Q14677 625 aa9.59□□□□□ -0.87
HLA-DOB-209ENST00000488325 C5orf64Q2M2E5 130 aa9.59□□□□□ -0.87
HLA-DOB-209ENST00000488325 SLC25A24Q6NUK1 477 aa9.59□□□□□ -0.87
HLA-DOB-209ENST00000488325 Q8N6K4 173 aa9.59□□□□□ -0.87
HLA-DOB-209ENST00000488325 SCGB1C1Q8TD33 95 aa9.59□□□□□ -0.87
HLA-DOB-209ENST00000488325 RBMXL1Q96E39 390 aaKnown RBP9.59□□□□□ -0.87
HLA-DOB-209ENST00000488325 BSCL2Q96G97 398 aaPredicted RBP9.59□□□□□ -0.87
HLA-DOB-209ENST00000488325 SRSF8Q9BRL6 282 aaKnown RBP9.59□□□□□ -0.87
HLA-DOB-209ENST00000488325 FBXL15Q9H469 300 aa9.59□□□□□ -0.87
HLA-DOB-209ENST00000488325 TPSG1Q9NRR2 321 aa9.59□□□□□ -0.87
HLA-DOB-209ENST00000488325 WNK2Q9Y3S1 2297 aa9.59□□□□□ -0.87
HLA-DOB-209ENST00000488325 TENM3Q9P273 2699 aa9.58□□□□□ -0.88
HLA-DOB-209ENST00000488325 TSPAN9O75954 239 aa9.58□□□□□ -0.88
HLA-DOB-209ENST00000488325 OPN1MWP04001 364 aa9.58□□□□□ -0.88
HLA-DOB-209ENST00000488325 IFNA4P05014 189 aa9.58□□□□□ -0.88
HLA-DOB-209ENST00000488325 OPN1MW2P0DN77 364 aa9.58□□□□□ -0.88
HLA-DOB-209ENST00000488325 OPN1MW3P0DN78 364 aa9.58□□□□□ -0.88
HLA-DOB-209ENST00000488325 MYOD1P15172 320 aa9.58□□□□□ -0.88
HLA-DOB-209ENST00000488325 SNCAP37840 140 aa9.58□□□□□ -0.88
HLA-DOB-209ENST00000488325 NDUFA5Q16718 116 aa9.58□□□□□ -0.88
HLA-DOB-209ENST00000488325 LRRC75BQ2VPJ9 315 aa9.58□□□□□ -0.88
HLA-DOB-209ENST00000488325 OR8G2PQ6IF36 304 aa9.58□□□□□ -0.88
HLA-DOB-209ENST00000488325 BRD3OSQ6XYD6 125 aa9.58□□□□□ -0.88
HLA-DOB-209ENST00000488325 ETV3LQ6ZN32 361 aa9.58□□□□□ -0.88
HLA-DOB-209ENST00000488325 NANPQ8TBE9 248 aa9.58□□□□□ -0.88
HLA-DOB-209ENST00000488325 LRRC20Q8TCA0 184 aa9.58□□□□□ -0.88
HLA-DOB-209ENST00000488325 TMEM147Q9BVK8 224 aa9.58□□□□□ -0.88
HLA-DOB-209ENST00000488325 GGACTQ9BVM4 153 aa9.58□□□□□ -0.88
HLA-DOB-209ENST00000488325 ARV1Q9H2C2 271 aa9.58□□□□□ -0.88
HLA-DOB-209ENST00000488325 WFDC1Q9HC57 220 aa9.58□□□□□ -0.88
HLA-DOB-209ENST00000488325 A0A0U1RQK1 487 aa9.57□□□□□ -0.88
HLA-DOB-209ENST00000488325 NCBP2LA6PVI3 153 aaKnown RBP9.57□□□□□ -0.88
HLA-DOB-209ENST00000488325 PMS2P5A8MQ11 134 aa9.57□□□□□ -0.88
HLA-DOB-209ENST00000488325 CNIH1O95406 144 aa9.57□□□□□ -0.88
HLA-DOB-209ENST00000488325 CA2P00918 260 aa9.57□□□□□ -0.88
HLA-DOB-209ENST00000488325 CD24P25063 80 aa9.57□□□□□ -0.88
HLA-DOB-209ENST00000488325 PAX6P26367 422 aa9.57□□□□□ -0.88
HLA-DOB-209ENST00000488325 GNB1P62873 340 aa9.57□□□□□ -0.88
HLA-DOB-209ENST00000488325 AANATQ16613 207 aa9.57□□□□□ -0.88
HLA-DOB-209ENST00000488325 MRGPRG-AS1Q2M3A8 158 aa9.57□□□□□ -0.88
HLA-DOB-209ENST00000488325 C2orf83Q53S99 150 aa9.57□□□□□ -0.88
HLA-DOB-209ENST00000488325 KLF17Q5JT82 389 aaPredicted RBP9.57□□□□□ -0.88
HLA-DOB-209ENST00000488325 ALKAL2Q6UX46 152 aa9.57□□□□□ -0.88
HLA-DOB-209ENST00000488325 HAPLN4Q86UW8 402 aa9.57□□□□□ -0.88
HLA-DOB-209ENST00000488325 GNPNAT1Q96EK6 184 aaPredicted RBP9.57□□□□□ -0.88
HLA-DOB-209ENST00000488325 GINS3Q9BRX5 216 aa9.57□□□□□ -0.88
HLA-DOB-209ENST00000488325 PARD6GQ9BYG4 376 aaPredicted RBP9.57□□□□□ -0.88
HLA-DOB-209ENST00000488325 UQCC1Q9NVA1 299 aa9.57□□□□□ -0.88
HLA-DOB-209ENST00000488325 EPPK1P58107 5090 aaKnown RBP9.57□□□□□ -0.88
HLA-DOB-209ENST00000488325 AVPP01185 164 aa9.56□□□□□ -0.88
HLA-DOB-209ENST00000488325 SEC11BP0C7V7 166 aa9.56□□□□□ -0.88
HLA-DOB-209ENST00000488325 DLK1P80370 383 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms