RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 CD69Q07108 199 aa10.64□□□□□ -0.71
CPNE1-225ENST00000483495 C10orf55Q5SWW7 151 aa10.64□□□□□ -0.71
CPNE1-225ENST00000483495 MIC13Q5XKP0 118 aa10.64□□□□□ -0.71
CPNE1-225ENST00000483495 TMEM88Q6PEY1 159 aa10.64□□□□□ -0.71
CPNE1-225ENST00000483495 CBLN2Q8IUK8 224 aa10.64□□□□□ -0.71
CPNE1-225ENST00000483495 CYB561D1Q8N8Q1 229 aa10.64□□□□□ -0.71
CPNE1-225ENST00000483495 FBP1P09467 338 aa10.63□□□□□ -0.71
CPNE1-225ENST00000483495 CNTFRP26992 372 aa10.63□□□□□ -0.71
CPNE1-225ENST00000483495 CEACAM3P40198 252 aa10.63□□□□□ -0.71
CPNE1-225ENST00000483495 PRR20EP86478 221 aa10.63□□□□□ -0.71
CPNE1-225ENST00000483495 PRR20CP86479 221 aa10.63□□□□□ -0.71
CPNE1-225ENST00000483495 PRR20DP86480 221 aa10.63□□□□□ -0.71
CPNE1-225ENST00000483495 PRR20BP86481 221 aa10.63□□□□□ -0.71
CPNE1-225ENST00000483495 PRR20AP86496 221 aa10.63□□□□□ -0.71
CPNE1-225ENST00000483495 AWAT1Q58HT5 328 aa10.63□□□□□ -0.71
CPNE1-225ENST00000483495 GCSAMLQ5JQS6 135 aa10.63□□□□□ -0.71
CPNE1-225ENST00000483495 PVRIGQ6DKI7 326 aa10.63□□□□□ -0.71
CPNE1-225ENST00000483495 RNASEH2CQ8TDP1 164 aaKnown RBP10.63□□□□□ -0.71
CPNE1-225ENST00000483495 KLF2Q9Y5W3 355 aaPredicted RBP10.63□□□□□ -0.71
CPNE1-225ENST00000483495 TIMM23O14925 209 aa10.62□□□□□ -0.71
CPNE1-225ENST00000483495 EIF3GO75821 320 aaKnown RBP eCLIP10.62□□□□□ -0.71
CPNE1-225ENST00000483495 VENTXO95231 258 aa10.62□□□□□ -0.71
CPNE1-225ENST00000483495 SUB1P53999 127 aaKnown RBP eCLIP10.62□□□□□ -0.711e-12■■■■□ 22.8
CPNE1-225ENST00000483495 B2MP61769 119 aa10.62□□□□□ -0.71
CPNE1-225ENST00000483495 LMO4P61968 165 aa10.62□□□□□ -0.71
CPNE1-225ENST00000483495 GAMTQ14353 236 aa10.62□□□□□ -0.71
CPNE1-225ENST00000483495 RHEBQ15382 184 aa10.62□□□□□ -0.71
CPNE1-225ENST00000483495 STPG3Q8N7X2 389 aa10.62□□□□□ -0.71
CPNE1-225ENST00000483495 ZNF114Q8NC26 417 aa10.62□□□□□ -0.71
CPNE1-225ENST00000483495 CFHR4Q92496 578 aa10.62□□□□□ -0.71
CPNE1-225ENST00000483495 SPOCK3Q9BQ16 436 aa10.62□□□□□ -0.71
CPNE1-225ENST00000483495 MANBALQ9NQG1 85 aa10.62□□□□□ -0.71
CPNE1-225ENST00000483495 SLC45A2Q9UMX9 530 aa10.62□□□□□ -0.71
CPNE1-225ENST00000483495 IGLC7A0M8Q6 106 aa10.61□□□□□ -0.71
CPNE1-225ENST00000483495 C7orf77A4D0Y5 90 aa10.61□□□□□ -0.71
CPNE1-225ENST00000483495 HMGB3O15347 200 aaKnown RBP10.61□□□□□ -0.71
CPNE1-225ENST00000483495 IGHV4-39P01824 125 aa10.61□□□□□ -0.71
CPNE1-225ENST00000483495 COMPP49747 757 aaPredicted RBP10.61□□□□□ -0.71
CPNE1-225ENST00000483495 KLRD1Q13241 179 aa10.61□□□□□ -0.71
CPNE1-225ENST00000483495 FAM90A2PQ658T7 463 aa10.61□□□□□ -0.71
CPNE1-225ENST00000483495 VMO1Q7Z5L0 202 aa10.61□□□□□ -0.71
CPNE1-225ENST00000483495 SLC35E3Q7Z769 313 aa10.61□□□□□ -0.71
CPNE1-225ENST00000483495 PPP1R27Q86WC6 154 aa10.61□□□□□ -0.71
CPNE1-225ENST00000483495 MRPL41Q8IXM3 137 aaKnown RBP10.61□□□□□ -0.71
CPNE1-225ENST00000483495 SSMEM1Q8WWF3 244 aa10.61□□□□□ -0.71
CPNE1-225ENST00000483495 BPESC1Q9GZL8 116 aa10.61□□□□□ -0.71
CPNE1-225ENST00000483495 SIRPDQ9H106 197 aa10.61□□□□□ -0.71
CPNE1-225ENST00000483495 TMPRSS5Q9H3S3 457 aa10.61□□□□□ -0.71
CPNE1-225ENST00000483495 USP24Q9UPU5 2620 aa10.61□□□□□ -0.71
CPNE1-225ENST00000483495 IGKV1OR2-108A0A075B7D4 117 aa10.61□□□□□ -0.71
CPNE1-225ENST00000483495 IGHV2-70DA0A0C4DH43 119 aa10.61□□□□□ -0.71
CPNE1-225ENST00000483495 A0A1W2PPV4 95 aa10.61□□□□□ -0.71
CPNE1-225ENST00000483495 OOSP1A8MZH6 123 aa10.61□□□□□ -0.71
CPNE1-225ENST00000483495 LINC00869P0C866 280 aa10.61□□□□□ -0.71
CPNE1-225ENST00000483495 RNF224P0DH78 156 aa10.61□□□□□ -0.71
CPNE1-225ENST00000483495 DEFA4P12838 97 aa10.61□□□□□ -0.71
CPNE1-225ENST00000483495 RPL27AP46776 148 aaKnown RBP10.61□□□□□ -0.71
CPNE1-225ENST00000483495 PSMB3P49720 205 aa10.61□□□□□ -0.71
CPNE1-225ENST00000483495 MEF2BQ02080 365 aaPredicted RBP10.61□□□□□ -0.71
CPNE1-225ENST00000483495 SLC16A13Q7RTY0 426 aa10.61□□□□□ -0.71
CPNE1-225ENST00000483495 BBC3Q96PG8 261 aaPredicted RBP10.61□□□□□ -0.71
CPNE1-225ENST00000483495 SMCO4Q9NRQ5 59 aa10.61□□□□□ -0.71
CPNE1-225ENST00000483495 METTL1Q9UBP6 276 aaKnown RBP10.61□□□□□ -0.71
CPNE1-225ENST00000483495 H3BQ15 152 aa10.6□□□□□ -0.71
CPNE1-225ENST00000483495 M0R036 132 aa10.6□□□□□ -0.71
CPNE1-225ENST00000483495 ACTL6BO94805 426 aa10.6□□□□□ -0.71
CPNE1-225ENST00000483495 STAG3L2P0CL84 134 aa10.6□□□□□ -0.71
CPNE1-225ENST00000483495 STAG3L3P0CL85 134 aa10.6□□□□□ -0.71
CPNE1-225ENST00000483495 HOXB4P17483 251 aaPredicted RBP10.6□□□□□ -0.71
CPNE1-225ENST00000483495 PAX6P26367 422 aa10.6□□□□□ -0.71
CPNE1-225ENST00000483495 CD81P60033 236 aa10.6□□□□□ -0.71
CPNE1-225ENST00000483495 TNXAQ16473 311 aa10.6□□□□□ -0.71
CPNE1-225ENST00000483495 MLANAQ16655 118 aa10.6□□□□□ -0.71
CPNE1-225ENST00000483495 MINOS1Q5TGZ0 78 aa10.6□□□□□ -0.71
CPNE1-225ENST00000483495 LHFPL4Q7Z7J7 247 aa10.6□□□□□ -0.71
CPNE1-225ENST00000483495 RPS10P5Q9NQ39 176 aa10.6□□□□□ -0.71
CPNE1-225ENST00000483495 PUS1Q9Y606 427 aaKnown RBP eCLIP10.6□□□□□ -0.71
CPNE1-225ENST00000483495 MINOS1-NBL1R4GNA1 71 aa10.6□□□□□ -0.71
CPNE1-225ENST00000483495 SNRNP70P08621 437 aaKnown RBP10.59□□□□□ -0.71
CPNE1-225ENST00000483495 PDLIM4P50479 330 aa10.59□□□□□ -0.71
CPNE1-225ENST00000483495 LCN2P80188 198 aa10.59□□□□□ -0.71
CPNE1-225ENST00000483495 SSBP2P81877 361 aaPredicted RBP10.59□□□□□ -0.71
CPNE1-225ENST00000483495 NPBQ8NG41 125 aa10.59□□□□□ -0.71
CPNE1-225ENST00000483495 SLC35E1Q96K37 410 aa10.59□□□□□ -0.71
CPNE1-225ENST00000483495 NIPSNAP3BQ9BS92 247 aa10.59□□□□□ -0.71
CPNE1-225ENST00000483495 FNDC4Q9H6D8 234 aaPredicted RBP10.59□□□□□ -0.71
CPNE1-225ENST00000483495 TUBA4BQ9H853 241 aa10.59□□□□□ -0.71
CPNE1-225ENST00000483495 POLR3KQ9Y2Y1 108 aaPredicted RBP10.59□□□□□ -0.71
CPNE1-225ENST00000483495 HILPDAQ9Y5L2 63 aa10.59□□□□□ -0.71
CPNE1-225ENST00000483495 TEX22C9J3V5 150 aa10.59□□□□□ -0.71
CPNE1-225ENST00000483495 TMEM250H0YL14 139 aa10.59□□□□□ -0.71
CPNE1-225ENST00000483495 NDUFA3O95167 84 aa10.59□□□□□ -0.71
CPNE1-225ENST00000483495 CCDC144NLQ6NUI1 221 aa10.59□□□□□ -0.71
CPNE1-225ENST00000483495 SRSF8Q9BRL6 282 aaKnown RBP10.59□□□□□ -0.71
CPNE1-225ENST00000483495 C20orf24Q9BUV8 137 aa10.59□□□□□ -0.71
CPNE1-225ENST00000483495 FBXL15Q9H469 300 aa10.59□□□□□ -0.71
CPNE1-225ENST00000483495 DOPEY1Q5JWR5 2465 aa10.59□□□□□ -0.71
CPNE1-225ENST00000483495 MOSP00540 346 aa10.58□□□□□ -0.72
CPNE1-225ENST00000483495 PRB1P04280 392 aa10.58□□□□□ -0.72
CPNE1-225ENST00000483495 OR10J1P30954 320 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms