RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 BORCS7Q96B45 105 aa11.81□□□□□ -0.52
COL9A2-207ENST00000482722 GSX1Q9H4S2 264 aaPredicted RBP11.81□□□□□ -0.52
COL9A2-207ENST00000482722 KLF13Q9Y2Y9 288 aaPredicted RBP11.81□□□□□ -0.52
COL9A2-207ENST00000482722 PLCE1Q9P212 2302 aa11.81□□□□□ -0.52
COL9A2-207ENST00000482722 TRGV10A0A0A0MS01 117 aa11.81□□□□□ -0.52
COL9A2-207ENST00000482722 FOXH1O75593 365 aa11.81□□□□□ -0.52
COL9A2-207ENST00000482722 AGFG2O95081 481 aa11.81□□□□□ -0.52
COL9A2-207ENST00000482722 HAND1O96004 215 aa11.81□□□□□ -0.52
COL9A2-207ENST00000482722 HBZP02008 142 aa11.81□□□□□ -0.52
COL9A2-207ENST00000482722 GABRA2P47869 451 aa11.81□□□□□ -0.52
COL9A2-207ENST00000482722 CATR1Q13166 79 aa11.81□□□□□ -0.52
COL9A2-207ENST00000482722 MRPL54Q6P161 138 aaKnown RBP11.81□□□□□ -0.52
COL9A2-207ENST00000482722 PIP4P1Q86T03 277 aa11.81□□□□□ -0.52
COL9A2-207ENST00000482722 DOLPP1Q86YN1 238 aa11.81□□□□□ -0.52
COL9A2-207ENST00000482722 FER1L6-AS2Q96M78 137 aa11.81□□□□□ -0.52
COL9A2-207ENST00000482722 MS4A5Q9H3V2 200 aa11.81□□□□□ -0.52
COL9A2-207ENST00000482722 TRGV5A0A0B4J1U4 118 aa11.8□□□□□ -0.52
COL9A2-207ENST00000482722 IGLC7A0M8Q6 106 aa11.8□□□□□ -0.52
COL9A2-207ENST00000482722 DEFB109BQ30KR1 87 aa11.8□□□□□ -0.52
COL9A2-207ENST00000482722 MDS2Q8NDY4 140 aa11.8□□□□□ -0.52
COL9A2-207ENST00000482722 NINJ1Q92982 152 aa11.8□□□□□ -0.52
COL9A2-207ENST00000482722 SEPSECSQ9HD40 501 aaKnown RBP11.8□□□□□ -0.52
COL9A2-207ENST00000482722 IGHV1-69-2A0A0G2JMI3 117 aa11.8□□□□□ -0.52
COL9A2-207ENST00000482722 CBY3A6NI87 242 aa11.8□□□□□ -0.52
COL9A2-207ENST00000482722 REG1AP05451 166 aa11.8□□□□□ -0.52
COL9A2-207ENST00000482722 OR9G9P0C7N8 305 aa11.8□□□□□ -0.52
COL9A2-207ENST00000482722 MPV17P39210 176 aa11.8□□□□□ -0.52
COL9A2-207ENST00000482722 VAMP3Q15836 100 aa11.8□□□□□ -0.52
COL9A2-207ENST00000482722 CENPWQ5EE01 88 aa11.8□□□□□ -0.52
COL9A2-207ENST00000482722 CNEP1R1Q8N9A8 125 aa11.8□□□□□ -0.52
COL9A2-207ENST00000482722 OR4F17Q8NGA8 305 aa11.8□□□□□ -0.52
COL9A2-207ENST00000482722 C11orf52Q96A22 123 aa11.8□□□□□ -0.52
COL9A2-207ENST00000482722 DCTN5Q9BTE1 182 aa11.8□□□□□ -0.52
COL9A2-207ENST00000482722 PSG11Q9UQ72 335 aa11.8□□□□□ -0.52
COL9A2-207ENST00000482722 PTPRBP23467 1997 aa11.79□□□□□ -0.52
COL9A2-207ENST00000482722 MPDU1O75352 247 aa11.79□□□□□ -0.52
COL9A2-207ENST00000482722 CD46P15529 392 aa11.79□□□□□ -0.52
COL9A2-207ENST00000482722 MRPL49Q13405 166 aaKnown RBP11.79□□□□□ -0.52
COL9A2-207ENST00000482722 Q6ZR03 302 aa11.79□□□□□ -0.52
COL9A2-207ENST00000482722 C19orf35Q6ZS72 473 aa11.79□□□□□ -0.52
COL9A2-207ENST00000482722 ZBTB34Q8NCN2 500 aa11.79□□□□□ -0.52
COL9A2-207ENST00000482722 ZNF439Q8NDP4 499 aa11.79□□□□□ -0.52
COL9A2-207ENST00000482722 GP6Q9HCN6 339 aa11.79□□□□□ -0.52
COL9A2-207ENST00000482722 TP73-AS1Q9UF72 201 aa11.79□□□□□ -0.52
COL9A2-207ENST00000482722 CDC42EP3Q9UKI2 254 aa11.79□□□□□ -0.52
COL9A2-207ENST00000482722 LY96Q9Y6Y9 160 aa11.79□□□□□ -0.52
COL9A2-207ENST00000482722 PKDREJQ9NTG1 2253 aa11.79□□□□□ -0.52
COL9A2-207ENST00000482722 TM4SF5O14894 197 aa11.79□□□□□ -0.52
COL9A2-207ENST00000482722 PRAMEF6Q5VXH4 476 aa11.79□□□□□ -0.52
COL9A2-207ENST00000482722 ABHD12Q8N2K0 398 aa11.79□□□□□ -0.52
COL9A2-207ENST00000482722 HCFC1P51610 2035 aa11.78□□□□□ -0.52
COL9A2-207ENST00000482722 A0A1W2PN81 502 aa11.78□□□□□ -0.52
COL9A2-207ENST00000482722 PPBPP02775 128 aa11.78□□□□□ -0.52
COL9A2-207ENST00000482722 RELBQ01201 579 aa11.78□□□□□ -0.52
COL9A2-207ENST00000482722 PQLC2Q6ZP29 291 aa11.78□□□□□ -0.52
COL9A2-207ENST00000482722 OR5B3Q8NH48 314 aa11.78□□□□□ -0.52
COL9A2-207ENST00000482722 LRBAP50851 2863 aa11.78□□□□□ -0.52
COL9A2-207ENST00000482722 IGLL1P15814 213 aa11.78□□□□□ -0.52
COL9A2-207ENST00000482722 GNG4P50150 75 aa11.78□□□□□ -0.52
COL9A2-207ENST00000482722 ERVK11-1P61568 191 aa11.78□□□□□ -0.52
COL9A2-207ENST00000482722 Q56UQ5 140 aa11.78□□□□□ -0.52
COL9A2-207ENST00000482722 Q8IYB0 196 aa11.78□□□□□ -0.52
COL9A2-207ENST00000482722 HEYLQ9NQ87 328 aaPredicted RBP11.78□□□□□ -0.52
COL9A2-207ENST00000482722 TACC2O95359 2948 aa11.78□□□□□ -0.52
COL9A2-207ENST00000482722 TRAV30A0A087WSZ9 112 aa11.77□□□□□ -0.52
COL9A2-207ENST00000482722 TRAV9-2A0A087WT02 112 aa11.77□□□□□ -0.52
COL9A2-207ENST00000482722 CGAP01215 116 aa11.77□□□□□ -0.52
COL9A2-207ENST00000482722 AMY1AP04745 511 aa11.77□□□□□ -0.52
COL9A2-207ENST00000482722 IGHV1-2P23083 117 aa11.77□□□□□ -0.52
COL9A2-207ENST00000482722 FABP6P51161 128 aa11.77□□□□□ -0.52
COL9A2-207ENST00000482722 EFNB3Q15768 340 aa11.77□□□□□ -0.52
COL9A2-207ENST00000482722 PMCHL1Q16048 86 aa11.77□□□□□ -0.52
COL9A2-207ENST00000482722 ASPHD1Q5U4P2 390 aa11.77□□□□□ -0.52
COL9A2-207ENST00000482722 MUC15Q8N387 334 aa11.77□□□□□ -0.52
COL9A2-207ENST00000482722 C1orf159Q96HA4 380 aa11.77□□□□□ -0.52
COL9A2-207ENST00000482722 VPS25Q9BRG1 176 aa11.77□□□□□ -0.52
COL9A2-207ENST00000482722 HES4Q9HCC6 221 aa11.77□□□□□ -0.52
COL9A2-207ENST00000482722 TMEM30CPA0ZSE6 113 aa11.77□□□□□ -0.53
COL9A2-207ENST00000482722 FCGR3BO75015 233 aa11.77□□□□□ -0.53
COL9A2-207ENST00000482722 RPL19P84098 196 aaKnown RBP11.77□□□□□ -0.53
COL9A2-207ENST00000482722 EDDM3AQ14507 147 aa11.77□□□□□ -0.53
COL9A2-207ENST00000482722 PNKDQ8N490 385 aa11.77□□□□□ -0.53
COL9A2-207ENST00000482722 OR4P4Q8NGL7 312 aa11.77□□□□□ -0.53
COL9A2-207ENST00000482722 KLF14Q8TD94 323 aaPredicted RBP11.77□□□□□ -0.53
COL9A2-207ENST00000482722 METRNQ9UJH8 293 aa11.77□□□□□ -0.53
COL9A2-207ENST00000482722 COL6A6A6NMZ7 2263 aa11.77□□□□□ -0.53
COL9A2-207ENST00000482722 HELTA6NFD8 242 aa11.77□□□□□ -0.53
COL9A2-207ENST00000482722 CRYBB3P26998 211 aa11.77□□□□□ -0.53
COL9A2-207ENST00000482722 BPIFB3P59826 476 aa11.77□□□□□ -0.53
COL9A2-207ENST00000482722 RHOBP62745 196 aa11.77□□□□□ -0.53
COL9A2-207ENST00000482722 ZNF146Q15072 292 aa11.77□□□□□ -0.53
COL9A2-207ENST00000482722 LDLRAD2Q5SZI1 272 aa11.77□□□□□ -0.53
COL9A2-207ENST00000482722 EBLN2Q6P2I7 272 aa11.77□□□□□ -0.53
COL9A2-207ENST00000482722 PRSS33Q8NF86 280 aa11.77□□□□□ -0.53
COL9A2-207ENST00000482722 C18orf32Q8TCD1 76 aa11.77□□□□□ -0.53
COL9A2-207ENST00000482722 TAAR6Q96RI8 345 aa11.77□□□□□ -0.53
COL9A2-207ENST00000482722 TRIB1Q96RU8 372 aa11.77□□□□□ -0.53
COL9A2-207ENST00000482722 TRAV3A0A0B4J244 114 aa11.76□□□□□ -0.53
COL9A2-207ENST00000482722 ACTL6BO94805 426 aa11.76□□□□□ -0.53
COL9A2-207ENST00000482722 HLA-DQA1P01909 254 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms