RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 S4R3C0 116 aa9.95□□□□□ -0.82
HDAC1-203ENST00000463172 TGOLN2O43493 480 aa9.94□□□□□ -0.82
HDAC1-203ENST00000463172 CTSDP07339 412 aaPredicted RBP9.94□□□□□ -0.82
HDAC1-203ENST00000463172 AKAIN1P0CW23 69 aa9.94□□□□□ -0.82
HDAC1-203ENST00000463172 CBLN1P23435 193 aa9.94□□□□□ -0.82
HDAC1-203ENST00000463172 ELLP55199 621 aaPredicted RBP9.94□□□□□ -0.82
HDAC1-203ENST00000463172 HSPE1P61604 102 aaKnown RBP9.94□□□□□ -0.82
HDAC1-203ENST00000463172 SURF2Q15527 256 aaPredicted RBP9.94□□□□□ -0.82
HDAC1-203ENST00000463172 GUCA2BQ16661 112 aa9.94□□□□□ -0.82
HDAC1-203ENST00000463172 DEFB114Q30KQ6 69 aa9.94□□□□□ -0.82
HDAC1-203ENST00000463172 ANKRD55Q3KP44 614 aa9.94□□□□□ -0.82
HDAC1-203ENST00000463172 CD300EQ496F6 205 aaPredicted RBP9.94□□□□□ -0.82
HDAC1-203ENST00000463172 ZNF57Q68EA5 555 aaPredicted RBP9.94□□□□□ -0.82
HDAC1-203ENST00000463172 SBSPONQ8IVN8 264 aa9.94□□□□□ -0.82
HDAC1-203ENST00000463172 Q8N1Y9 231 aa9.94□□□□□ -0.82
HDAC1-203ENST00000463172 DYNC2LI1Q8TCX1 351 aa9.94□□□□□ -0.82
HDAC1-203ENST00000463172 RRNAD1Q96FB5 475 aaKnown RBP9.94□□□□□ -0.82
HDAC1-203ENST00000463172 SCGB3A2Q96PL1 93 aa9.94□□□□□ -0.82
HDAC1-203ENST00000463172 PRRT1Q99946 306 aa9.94□□□□□ -0.82
HDAC1-203ENST00000463172 PLEKHA3Q9HB20 300 aa9.94□□□□□ -0.82
HDAC1-203ENST00000463172 C21orf62Q9NYP8 219 aa9.94□□□□□ -0.82
HDAC1-203ENST00000463172 DMRT1Q9Y5R6 373 aa9.94□□□□□ -0.82
HDAC1-203ENST00000463172 PI3P19957 117 aa9.93□□□□□ -0.82
HDAC1-203ENST00000463172 CD81P60033 236 aa9.93□□□□□ -0.82
HDAC1-203ENST00000463172 PRCDQ00LT1 54 aa9.93□□□□□ -0.82
HDAC1-203ENST00000463172 Q56UQ5 140 aa9.93□□□□□ -0.82
HDAC1-203ENST00000463172 SLC16A13Q7RTY0 426 aa9.93□□□□□ -0.82
HDAC1-203ENST00000463172 SLC35G3Q8N808 338 aa9.93□□□□□ -0.82
HDAC1-203ENST00000463172 OR13C8Q8NGS7 320 aa9.93□□□□□ -0.82
HDAC1-203ENST00000463172 ISOC1Q96CN7 298 aa9.93□□□□□ -0.82
HDAC1-203ENST00000463172 RCHY1Q96PM5 261 aa9.93□□□□□ -0.82
HDAC1-203ENST00000463172 ENY2Q9NPA8 101 aa9.93□□□□□ -0.82
HDAC1-203ENST00000463172 MRPL27Q9P0M9 148 aaKnown RBP9.93□□□□□ -0.82
HDAC1-203ENST00000463172 SCP2D1Q9UJQ7 156 aa9.93□□□□□ -0.82
HDAC1-203ENST00000463172 TEX13DA0A0J9YY54 714 aaPredicted RBP9.92□□□□□ -0.82
HDAC1-203ENST00000463172 CCDC160A6NGH7 325 aa9.92□□□□□ -0.82
HDAC1-203ENST00000463172 OR2T8A6NH00 312 aa9.92□□□□□ -0.82
HDAC1-203ENST00000463172 H3BMQ9 156 aa9.92□□□□□ -0.82
HDAC1-203ENST00000463172 IFNA17P01571 189 aa9.92□□□□□ -0.82
HDAC1-203ENST00000463172 SNCAP37840 140 aa9.92□□□□□ -0.82
HDAC1-203ENST00000463172 SUB1P53999 127 aaKnown RBP eCLIP9.92□□□□□ -0.82
HDAC1-203ENST00000463172 RELQ04864 619 aaPredicted RBP9.92□□□□□ -0.82
HDAC1-203ENST00000463172 RBPMS2Q6ZRY4 209 aaKnown RBP9.92□□□□□ -0.82
HDAC1-203ENST00000463172 FAM219AQ8IW50 185 aa9.92□□□□□ -0.82
HDAC1-203ENST00000463172 OR2C3Q8N628 320 aa9.92□□□□□ -0.82
HDAC1-203ENST00000463172 UBAC2Q8NBM4 344 aa9.92□□□□□ -0.82
HDAC1-203ENST00000463172 MCFD2Q8NI22 146 aa9.92□□□□□ -0.82
HDAC1-203ENST00000463172 MARCH1Q8TCQ1 289 aa9.92□□□□□ -0.82
HDAC1-203ENST00000463172 MISP3Q96FF7 219 aa9.92□□□□□ -0.82
HDAC1-203ENST00000463172 NEURL2Q9BR09 285 aa9.92□□□□□ -0.82
HDAC1-203ENST00000463172 ZC4H2Q9NQZ6 224 aa9.92□□□□□ -0.82
HDAC1-203ENST00000463172 C19orf73Q9NVV2 129 aa9.92□□□□□ -0.82
HDAC1-203ENST00000463172 TRAV25A0A0B4J276 109 aa9.91□□□□□ -0.82
HDAC1-203ENST00000463172 FABP12A6NFH5 140 aa9.91□□□□□ -0.82
HDAC1-203ENST00000463172 NDUFA4O00483 81 aa9.91□□□□□ -0.82
HDAC1-203ENST00000463172 NUPL2O15504 423 aaKnown RBP9.91□□□□□ -0.82
HDAC1-203ENST00000463172 GSTZ1O43708 216 aaPredicted RBP9.91□□□□□ -0.82
HDAC1-203ENST00000463172 SCGB2A1O75556 95 aa9.91□□□□□ -0.82
HDAC1-203ENST00000463172 IGKV1-39P01597 117 aa9.91□□□□□ -0.82
HDAC1-203ENST00000463172 IGKV1D-39P04432 117 aa9.91□□□□□ -0.82
HDAC1-203ENST00000463172 FAUP35544 74 aaKnown RBP9.91□□□□□ -0.82
HDAC1-203ENST00000463172 MFAP4P55083 255 aa9.91□□□□□ -0.82
HDAC1-203ENST00000463172 DHODHQ02127 395 aa9.91□□□□□ -0.82
HDAC1-203ENST00000463172 UXS1Q8NBZ7 420 aa9.91□□□□□ -0.82
HDAC1-203ENST00000463172 ZNF114Q8NC26 417 aa9.91□□□□□ -0.82
HDAC1-203ENST00000463172 OR4D10Q8NGI6 311 aa9.91□□□□□ -0.82
HDAC1-203ENST00000463172 SCARB1Q8WTV0 552 aa9.91□□□□□ -0.82
HDAC1-203ENST00000463172 TP53RKQ96S44 253 aa9.91□□□□□ -0.82
HDAC1-203ENST00000463172 TXN2Q99757 166 aa9.91□□□□□ -0.82
HDAC1-203ENST00000463172 SPATA25Q9BR10 227 aa9.91□□□□□ -0.82
HDAC1-203ENST00000463172 ZNF436Q9C0F3 470 aaPredicted RBP9.91□□□□□ -0.82
HDAC1-203ENST00000463172 DAZ1Q9NQZ3 744 aaKnown RBP9.91□□□□□ -0.82
HDAC1-203ENST00000463172 CACFD1Q9UGQ2 172 aa9.91□□□□□ -0.82
HDAC1-203ENST00000463172 KCNIP3Q9Y2W7 256 aa9.91□□□□□ -0.82
HDAC1-203ENST00000463172 PIGBOS1A0A0B4J2F0 54 aa9.9□□□□□ -0.82
HDAC1-203ENST00000463172 TMEM213A2RRL7 107 aa9.9□□□□□ -0.82
HDAC1-203ENST00000463172 IZUMO1RA6ND01 250 aa9.9□□□□□ -0.82
HDAC1-203ENST00000463172 C3orf84H3BNL1 204 aa9.9□□□□□ -0.82
HDAC1-203ENST00000463172 CORTO00230 105 aa9.9□□□□□ -0.82
HDAC1-203ENST00000463172 UCP1P25874 307 aa9.9□□□□□ -0.82
HDAC1-203ENST00000463172 S100A5P33763 92 aa9.9□□□□□ -0.82
HDAC1-203ENST00000463172 HOXA1P49639 335 aaPredicted RBP9.9□□□□□ -0.82
HDAC1-203ENST00000463172 AP3S2P59780 193 aa9.9□□□□□ -0.82
HDAC1-203ENST00000463172 LAMTOR1Q6IAA8 161 aa9.9□□□□□ -0.82
HDAC1-203ENST00000463172 OR4C16Q8NGL9 310 aa9.9□□□□□ -0.82
HDAC1-203ENST00000463172 TMEM190Q8WZ59 177 aa9.9□□□□□ -0.82
HDAC1-203ENST00000463172 THAP7Q9BT49 309 aaPredicted RBP9.9□□□□□ -0.82
HDAC1-203ENST00000463172 SLIRPQ9GZT3 109 aaKnown RBP9.9□□□□□ -0.82
HDAC1-203ENST00000463172 DBX1A6NMT0 343 aa9.89□□□□□ -0.83
HDAC1-203ENST00000463172 ZNF785A8K8V0 405 aa9.89□□□□□ -0.83
HDAC1-203ENST00000463172 K7EIM0 57 aa9.89□□□□□ -0.83
HDAC1-203ENST00000463172 GNG7O60262 68 aa9.89□□□□□ -0.83
HDAC1-203ENST00000463172 IGKV1-5P01602 117 aa9.89□□□□□ -0.83
HDAC1-203ENST00000463172 BMI1P35226 326 aa9.89□□□□□ -0.83
HDAC1-203ENST00000463172 NPBWR1P48145 328 aa9.89□□□□□ -0.83
HDAC1-203ENST00000463172 TM4SF20Q53R12 229 aa9.89□□□□□ -0.83
HDAC1-203ENST00000463172 BTNL8Q6UX41 500 aa9.89□□□□□ -0.83
HDAC1-203ENST00000463172 ADAMTSL5Q6ZMM2 481 aa9.89□□□□□ -0.83
HDAC1-203ENST00000463172 OR52B4Q8NGK2 314 aa9.89□□□□□ -0.83
HDAC1-203ENST00000463172 CACNG8Q8WXS5 425 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms