RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 PALMDQ9NP74 551 aa8□□□□□ -1.13
MCF2L-216ENST00000439475 ENY2Q9NPA8 101 aa8□□□□□ -1.13
MCF2L-216ENST00000439475 TMEM14BQ9NUH8 114 aa8□□□□□ -1.13
MCF2L-216ENST00000439475 SLC2A8Q9NY64 477 aa8□□□□□ -1.13
MCF2L-216ENST00000439475 LSM4Q9Y4Z0 139 aaKnown RBP8□□□□□ -1.13
MCF2L-216ENST00000439475 F11RQ9Y624 299 aaKnown RBP8□□□□□ -1.13
MCF2L-216ENST00000439475 NOTCH1P46531 2555 aa7.99□□□□□ -1.13
MCF2L-216ENST00000439475 ZNF320A2RRD8 509 aa7.99□□□□□ -1.13
MCF2L-216ENST00000439475 PPP5D1E7EU14 171 aa7.99□□□□□ -1.13
MCF2L-216ENST00000439475 LGALS9O00182 355 aa7.99□□□□□ -1.13
MCF2L-216ENST00000439475 IFNA17P01571 189 aa7.99□□□□□ -1.13
MCF2L-216ENST00000439475 CSN3P07498 182 aa7.99□□□□□ -1.13
MCF2L-216ENST00000439475 NHLRC4P0CG21 123 aaPredicted RBP7.99□□□□□ -1.13
MCF2L-216ENST00000439475 ANXA3P12429 323 aa7.99□□□□□ -1.13
MCF2L-216ENST00000439475 SNCAP37840 140 aa7.99□□□□□ -1.13
MCF2L-216ENST00000439475 INPP1P49441 399 aa7.99□□□□□ -1.13
MCF2L-216ENST00000439475 SUB1P53999 127 aaKnown RBP eCLIP7.99□□□□□ -1.13
MCF2L-216ENST00000439475 PRCDQ00LT1 54 aa7.99□□□□□ -1.13
MCF2L-216ENST00000439475 WT1-ASQ06250 92 aa7.99□□□□□ -1.13
MCF2L-216ENST00000439475 LCN12Q6JVE5 192 aa7.99□□□□□ -1.13
MCF2L-216ENST00000439475 C19orf35Q6ZS72 473 aa7.99□□□□□ -1.13
MCF2L-216ENST00000439475 FAM219AQ8IW50 185 aa7.99□□□□□ -1.13
MCF2L-216ENST00000439475 Q8N402 240 aa7.99□□□□□ -1.13
MCF2L-216ENST00000439475 OR2C3Q8N628 320 aa7.99□□□□□ -1.13
MCF2L-216ENST00000439475 OR1P1Q8NH06 330 aa7.99□□□□□ -1.13
MCF2L-216ENST00000439475 ATP6V0BQ99437 205 aa7.99□□□□□ -1.13
MCF2L-216ENST00000439475 RTBDNQ9BSG5 229 aaPredicted RBP7.99□□□□□ -1.13
MCF2L-216ENST00000439475 RBM38Q9H0Z9 239 aaKnown RBP7.99□□□□□ -1.13
MCF2L-216ENST00000439475 CACFD1Q9UGQ2 172 aa7.99□□□□□ -1.13
MCF2L-216ENST00000439475 S4R3C0 116 aa7.99□□□□□ -1.13
MCF2L-216ENST00000439475 VWFP04275 2813 aa7.99□□□□□ -1.13
MCF2L-216ENST00000439475 CDS2O95674 445 aa7.98□□□□□ -1.13
MCF2L-216ENST00000439475 OR5AC1P0C628 307 aa7.98□□□□□ -1.13
MCF2L-216ENST00000439475 SPSB3Q6PJ21 355 aa7.98□□□□□ -1.13
MCF2L-216ENST00000439475 SLC35G3Q8N808 338 aa7.98□□□□□ -1.13
MCF2L-216ENST00000439475 ZNF502Q8TBZ5 544 aa7.98□□□□□ -1.13
MCF2L-216ENST00000439475 RBPMSQ93062 196 aaKnown RBP7.98□□□□□ -1.13
MCF2L-216ENST00000439475 CCDC140Q96MF4 163 aa7.98□□□□□ -1.13
MCF2L-216ENST00000439475 TMEM222Q9H0R3 208 aa7.98□□□□□ -1.13
MCF2L-216ENST00000439475 C5orf66Q9H5L9 145 aa7.98□□□□□ -1.13
MCF2L-216ENST00000439475 C21orf62Q9NYP8 219 aa7.98□□□□□ -1.13
MCF2L-216ENST00000439475 TECRQ9NZ01 308 aaKnown RBP7.98□□□□□ -1.13
MCF2L-216ENST00000439475 MFSD2BA6NFX1 497 aa7.97□□□□□ -1.13
MCF2L-216ENST00000439475 CRYM-AS1A6NIL9 109 aa7.97□□□□□ -1.13
MCF2L-216ENST00000439475 DBX1A6NMT0 343 aa7.97□□□□□ -1.13
MCF2L-216ENST00000439475 CORTO00230 105 aa7.97□□□□□ -1.13
MCF2L-216ENST00000439475 IGKV1-5P01602 117 aa7.97□□□□□ -1.13
MCF2L-216ENST00000439475 HLA-AP01891 365 aaKnown RBP7.97□□□□□ -1.13
MCF2L-216ENST00000439475 GPR183P32249 361 aa7.97□□□□□ -1.13
MCF2L-216ENST00000439475 ETV6P41212 452 aa7.97□□□□□ -1.13
MCF2L-216ENST00000439475 MFAP4P55083 255 aa7.97□□□□□ -1.13
MCF2L-216ENST00000439475 ELLP55199 621 aaPredicted RBP7.97□□□□□ -1.13
MCF2L-216ENST00000439475 Q56UQ5 140 aa7.97□□□□□ -1.13
MCF2L-216ENST00000439475 IL34Q6ZMJ4 242 aa7.97□□□□□ -1.13
MCF2L-216ENST00000439475 CCDC190Q86UF4 302 aa7.97□□□□□ -1.13
MCF2L-216ENST00000439475 GTSCR1Q86UQ5 136 aa7.97□□□□□ -1.13
MCF2L-216ENST00000439475 SCARB1Q8WTV0 552 aa7.97□□□□□ -1.13
MCF2L-216ENST00000439475 GLYATL2Q8WU03 294 aa7.97□□□□□ -1.13
MCF2L-216ENST00000439475 MARC2Q969Z3 335 aa7.97□□□□□ -1.13
MCF2L-216ENST00000439475 MISP3Q96FF7 219 aa7.97□□□□□ -1.13
MCF2L-216ENST00000439475 BSCL2Q96G97 398 aaPredicted RBP7.97□□□□□ -1.13
MCF2L-216ENST00000439475 TXN2Q99757 166 aa7.97□□□□□ -1.13
MCF2L-216ENST00000439475 SLC25A21Q9BQT8 299 aaPredicted RBP7.97□□□□□ -1.13
MCF2L-216ENST00000439475 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.97□□□□□ -1.13
MCF2L-216ENST00000439475 UFC1Q9Y3C8 167 aa7.97□□□□□ -1.13
MCF2L-216ENST00000439475 DMRT1Q9Y5R6 373 aa7.97□□□□□ -1.13
MCF2L-216ENST00000439475 C2orf70A6NJV1 201 aa7.96□□□□□ -1.14
MCF2L-216ENST00000439475 INS-IGF2F8WCM5 200 aa7.96□□□□□ -1.14
MCF2L-216ENST00000439475 NUPL2O15504 423 aaKnown RBP7.96□□□□□ -1.14
MCF2L-216ENST00000439475 ST8SIA3O43173 380 aa7.96□□□□□ -1.14
MCF2L-216ENST00000439475 TGOLN2O43493 480 aa7.96□□□□□ -1.14
MCF2L-216ENST00000439475 FOLR2P14207 255 aa7.96□□□□□ -1.14
MCF2L-216ENST00000439475 AKR1C4P17516 323 aa7.96□□□□□ -1.14
MCF2L-216ENST00000439475 CBLN1P23435 193 aa7.96□□□□□ -1.14
MCF2L-216ENST00000439475 TMEM268Q5VZI3 342 aa7.96□□□□□ -1.14
MCF2L-216ENST00000439475 ZNF57Q68EA5 555 aaPredicted RBP7.96□□□□□ -1.14
MCF2L-216ENST00000439475 HAPLN4Q86UW8 402 aa7.96□□□□□ -1.14
MCF2L-216ENST00000439475 SELENOHQ8IZQ5 122 aaKnown RBP7.96□□□□□ -1.14
MCF2L-216ENST00000439475 UBAC2Q8NBM4 344 aa7.96□□□□□ -1.14
MCF2L-216ENST00000439475 ZNF114Q8NC26 417 aa7.96□□□□□ -1.14
MCF2L-216ENST00000439475 OR52E5Q8NH55 327 aa7.96□□□□□ -1.14
MCF2L-216ENST00000439475 IL22RA2Q969J5 263 aa7.96□□□□□ -1.14
MCF2L-216ENST00000439475 GALNT14Q96FL9 552 aa7.96□□□□□ -1.14
MCF2L-216ENST00000439475 MRPL27Q9P0M9 148 aaKnown RBP7.96□□□□□ -1.14
MCF2L-216ENST00000439475 IGHV3-21A0A0B4J1V1 117 aa7.95□□□□□ -1.14
MCF2L-216ENST00000439475 A0A0B4J293 547 aa7.95□□□□□ -1.14
MCF2L-216ENST00000439475 OR2T8A6NH00 312 aa7.95□□□□□ -1.14
MCF2L-216ENST00000439475 SCGB2A1O75556 95 aa7.95□□□□□ -1.14
MCF2L-216ENST00000439475 P0C879 139 aa7.95□□□□□ -1.14
MCF2L-216ENST00000439475 NPBWR1P48145 328 aa7.95□□□□□ -1.14
MCF2L-216ENST00000439475 HOXA1P49639 335 aaPredicted RBP7.95□□□□□ -1.14
MCF2L-216ENST00000439475 SPCS3P61009 180 aa7.95□□□□□ -1.14
MCF2L-216ENST00000439475 SRPXP78539 464 aa7.95□□□□□ -1.14
MCF2L-216ENST00000439475 RELQ04864 619 aaPredicted RBP7.95□□□□□ -1.14
MCF2L-216ENST00000439475 KLF9Q13886 244 aaPredicted RBP7.95□□□□□ -1.14
MCF2L-216ENST00000439475 IZUMO4Q1ZYL8 232 aa7.95□□□□□ -1.14
MCF2L-216ENST00000439475 DEFB114Q30KQ6 69 aa7.95□□□□□ -1.14
MCF2L-216ENST00000439475 TRIQKQ629K1 86 aa7.95□□□□□ -1.14
MCF2L-216ENST00000439475 NOXA1Q86UR1 476 aa7.95□□□□□ -1.14
MCF2L-216ENST00000439475 LGI3Q8N145 548 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms