RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 IGHV2-5P01817 119 aa17.48■□□□□ 0.39
CNEP1R1-202ENST00000427478 CRYGBP07316 175 aa17.48■□□□□ 0.39
CNEP1R1-202ENST00000427478 PRTN3P24158 256 aa17.48■□□□□ 0.39
CNEP1R1-202ENST00000427478 RAB31Q13636 194 aa17.48■□□□□ 0.39
CNEP1R1-202ENST00000427478 PRSS8Q16651 343 aa17.48■□□□□ 0.39
CNEP1R1-202ENST00000427478 HCP5Q6MZN7 132 aa17.48■□□□□ 0.39
CNEP1R1-202ENST00000427478 RBMS3Q6XE24 437 aaKnown RBP17.48■□□□□ 0.39
CNEP1R1-202ENST00000427478 STPG3Q8N7X2 389 aa17.48■□□□□ 0.39
CNEP1R1-202ENST00000427478 GATAD1Q8WUU5 269 aa17.48■□□□□ 0.39
CNEP1R1-202ENST00000427478 CFAP46Q8IYW2 2715 aa17.48■□□□□ 0.39
CNEP1R1-202ENST00000427478 TIMM23O14925 209 aa17.48■□□□□ 0.39
CNEP1R1-202ENST00000427478 PMS2P11Q13670 270 aa17.48■□□□□ 0.39
CNEP1R1-202ENST00000427478 TNXAQ16473 311 aa17.48■□□□□ 0.39
CNEP1R1-202ENST00000427478 MMD2Q8IY49 270 aa17.48■□□□□ 0.39
CNEP1R1-202ENST00000427478 METTL1Q9UBP6 276 aaKnown RBP17.48■□□□□ 0.39
CNEP1R1-202ENST00000427478 SIGLEC9Q9Y336 463 aa17.48■□□□□ 0.39
CNEP1R1-202ENST00000427478 HILPDAQ9Y5L2 63 aa17.48■□□□□ 0.39
CNEP1R1-202ENST00000427478 PRB1P04280 392 aa17.47■□□□□ 0.39
CNEP1R1-202ENST00000427478 REG1AP05451 166 aa17.47■□□□□ 0.39
CNEP1R1-202ENST00000427478 CD69Q07108 199 aa17.47■□□□□ 0.39
CNEP1R1-202ENST00000427478 GAMTQ14353 236 aa17.47■□□□□ 0.39
CNEP1R1-202ENST00000427478 IGFBPL1Q8WX77 278 aa17.47■□□□□ 0.39
CNEP1R1-202ENST00000427478 BPESC1Q9GZL8 116 aa17.47■□□□□ 0.39
CNEP1R1-202ENST00000427478 DPM3Q9P2X0 92 aa17.47■□□□□ 0.39
CNEP1R1-202ENST00000427478 TACC2O95359 2948 aa17.47■□□□□ 0.39
CNEP1R1-202ENST00000427478 OVOL3O00110 214 aa17.47■□□□□ 0.39
CNEP1R1-202ENST00000427478 ACTL6BO94805 426 aa17.47■□□□□ 0.39
CNEP1R1-202ENST00000427478 RNF224P0DH78 156 aa17.47■□□□□ 0.39
CNEP1R1-202ENST00000427478 PAX6P26367 422 aa17.47■□□□□ 0.39
CNEP1R1-202ENST00000427478 LCN2P80188 198 aa17.47■□□□□ 0.39
CNEP1R1-202ENST00000427478 FAM90A2PQ658T7 463 aa17.47■□□□□ 0.39
CNEP1R1-202ENST00000427478 VMO1Q7Z5L0 202 aa17.47■□□□□ 0.39
CNEP1R1-202ENST00000427478 TMEM144Q7Z5S9 345 aa17.47■□□□□ 0.39
CNEP1R1-202ENST00000427478 LHFPL4Q7Z7J7 247 aa17.47■□□□□ 0.39
CNEP1R1-202ENST00000427478 P2RX4Q99571 388 aa17.47■□□□□ 0.39
CNEP1R1-202ENST00000427478 SMCO4Q9NRQ5 59 aa17.47■□□□□ 0.39
CNEP1R1-202ENST00000427478 PLXNB1O43157 2135 aa17.46■□□□□ 0.39
CNEP1R1-202ENST00000427478 IGKV1OR2-108A0A075B7D4 117 aa17.46■□□□□ 0.39
CNEP1R1-202ENST00000427478 ODF3BA8MYP8 253 aa17.46■□□□□ 0.39
CNEP1R1-202ENST00000427478 PSMB3P49720 205 aa17.46■□□□□ 0.39
CNEP1R1-202ENST00000427478 MEF2BQ02080 365 aaPredicted RBP17.46■□□□□ 0.39
CNEP1R1-202ENST00000427478 RHEBQ15382 184 aa17.46■□□□□ 0.39
CNEP1R1-202ENST00000427478 SLC16A13Q7RTY0 426 aa17.46■□□□□ 0.39
CNEP1R1-202ENST00000427478 SLC35E3Q7Z769 313 aa17.46■□□□□ 0.39
CNEP1R1-202ENST00000427478 RPL27AP46776 148 aaKnown RBP17.45■□□□□ 0.38
CNEP1R1-202ENST00000427478 RPL29P47914 159 aaKnown RBP17.45■□□□□ 0.38
CNEP1R1-202ENST00000427478 CD81P60033 236 aa17.45■□□□□ 0.38
CNEP1R1-202ENST00000427478 GNB1P62873 340 aa17.45■□□□□ 0.38
CNEP1R1-202ENST00000427478 NIPSNAP3BQ9BS92 247 aa17.45■□□□□ 0.38
CNEP1R1-202ENST00000427478 MANBALQ9NQG1 85 aa17.45■□□□□ 0.38
CNEP1R1-202ENST00000427478 CEACAM3P40198 252 aa17.45■□□□□ 0.38
CNEP1R1-202ENST00000427478 KIR3DL3Q8N743 410 aa17.45■□□□□ 0.38
CNEP1R1-202ENST00000427478 FBXL15Q9H469 300 aa17.45■□□□□ 0.38
CNEP1R1-202ENST00000427478 VENTXO95231 258 aa17.44■□□□□ 0.38
CNEP1R1-202ENST00000427478 SUB1P53999 127 aaKnown RBP eCLIP17.44■□□□□ 0.38
CNEP1R1-202ENST00000427478 PRR20EP86478 221 aa17.44■□□□□ 0.38
CNEP1R1-202ENST00000427478 PRR20CP86479 221 aa17.44■□□□□ 0.38
CNEP1R1-202ENST00000427478 PRR20DP86480 221 aa17.44■□□□□ 0.38
CNEP1R1-202ENST00000427478 PRR20BP86481 221 aa17.44■□□□□ 0.38
CNEP1R1-202ENST00000427478 PRR20AP86496 221 aa17.44■□□□□ 0.38
CNEP1R1-202ENST00000427478 PPP1R27Q86WC6 154 aa17.44■□□□□ 0.38
CNEP1R1-202ENST00000427478 NAV3Q8IVL0 2385 aa17.44■□□□□ 0.38
CNEP1R1-202ENST00000427478 LOC105371267A0A1B0GV96 52 aa17.44■□□□□ 0.38
CNEP1R1-202ENST00000427478 IGLC7A0M8Q6 106 aa17.44■□□□□ 0.38
CNEP1R1-202ENST00000427478 IGHV4-39P01824 125 aa17.44■□□□□ 0.38
CNEP1R1-202ENST00000427478 APELAP0DMC3 54 aa17.44■□□□□ 0.38
CNEP1R1-202ENST00000427478 OR2T6Q8NHC8 308 aa17.44■□□□□ 0.38
CNEP1R1-202ENST00000427478 ABHD5Q8WTS1 349 aa17.44■□□□□ 0.38
CNEP1R1-202ENST00000427478 ACY3Q96HD9 319 aa17.44■□□□□ 0.38
CNEP1R1-202ENST00000427478 SLC35E1Q96K37 410 aa17.44■□□□□ 0.38
CNEP1R1-202ENST00000427478 SLC45A2Q9UMX9 530 aa17.44■□□□□ 0.38
CNEP1R1-202ENST00000427478 CACNA1BQ00975 2339 aa17.43■□□□□ 0.38
CNEP1R1-202ENST00000427478 PAGE4O60829 102 aa17.43■□□□□ 0.38
CNEP1R1-202ENST00000427478 OR10J1P30954 320 aa17.43■□□□□ 0.38
CNEP1R1-202ENST00000427478 COMPP49747 757 aaPredicted RBP17.43■□□□□ 0.38
CNEP1R1-202ENST00000427478 C1orf122Q6ZSJ8 110 aa17.43■□□□□ 0.38
CNEP1R1-202ENST00000427478 RNASEH2CQ8TDP1 164 aaKnown RBP17.43■□□□□ 0.38
CNEP1R1-202ENST00000427478 CFHR4Q92496 578 aa17.43■□□□□ 0.38
CNEP1R1-202ENST00000427478 TVP23CQ96ET8 276 aa17.43■□□□□ 0.38
CNEP1R1-202ENST00000427478 BBC3Q96PG8 261 aaPredicted RBP17.43■□□□□ 0.38
CNEP1R1-202ENST00000427478 LINC00869P0C866 280 aa17.42■□□□□ 0.38
CNEP1R1-202ENST00000427478 ARL14EPLP0DKL9 152 aa17.42■□□□□ 0.38
CNEP1R1-202ENST00000427478 HOXB4P17483 251 aaPredicted RBP17.42■□□□□ 0.38
CNEP1R1-202ENST00000427478 GPX4P36969 197 aaPredicted RBP17.42■□□□□ 0.38
CNEP1R1-202ENST00000427478 PLGLAQ15195 96 aa17.42■□□□□ 0.38
CNEP1R1-202ENST00000427478 CACNG8Q8WXS5 425 aa17.42■□□□□ 0.38
CNEP1R1-202ENST00000427478 FNDC4Q9H6D8 234 aaPredicted RBP17.42■□□□□ 0.38
CNEP1R1-202ENST00000427478 USP24Q9UPU5 2620 aa17.42■□□□□ 0.38
CNEP1R1-202ENST00000427478 AREGP15514 252 aa17.42■□□□□ 0.38
CNEP1R1-202ENST00000427478 MAS1LP35410 378 aa17.42■□□□□ 0.38
CNEP1R1-202ENST00000427478 TAGLN2P37802 199 aaKnown RBP17.42■□□□□ 0.38
CNEP1R1-202ENST00000427478 SPATA31B1PQ5VZV4 182 aa17.42■□□□□ 0.38
CNEP1R1-202ENST00000427478 SEPSECSQ9HD40 501 aaKnown RBP17.42■□□□□ 0.38
CNEP1R1-202ENST00000427478 IGHV3-48P01763 117 aa17.41■□□□□ 0.38
CNEP1R1-202ENST00000427478 STAG3L2P0CL84 134 aa17.41■□□□□ 0.38
CNEP1R1-202ENST00000427478 STAG3L3P0CL85 134 aa17.41■□□□□ 0.38
CNEP1R1-202ENST00000427478 GATA2P23769 480 aaPredicted RBP17.41■□□□□ 0.38
CNEP1R1-202ENST00000427478 CD24P25063 80 aa17.41■□□□□ 0.38
CNEP1R1-202ENST00000427478 PAX2Q02962 417 aa17.41■□□□□ 0.38
CNEP1R1-202ENST00000427478 MMDQ15546 238 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms