RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 RPP30P78346 268 aaKnown RBP11.97□□□□□ -0.49
CAPN3-207ENST00000397200 PMS2P11Q13670 270 aa11.97□□□□□ -0.49
CAPN3-207ENST00000397200 RTL8BQ17RB0 113 aa11.97□□□□□ -0.49
CAPN3-207ENST00000397200 SPINK9Q5DT21 86 aa11.97□□□□□ -0.49
CAPN3-207ENST00000397200 TPTE2P1Q5T6R2 138 aa11.97□□□□□ -0.49
CAPN3-207ENST00000397200 TGIF2LXQ8IUE1 241 aa11.97□□□□□ -0.49
CAPN3-207ENST00000397200 ST6GALNAC6Q969X2 333 aa11.97□□□□□ -0.49
CAPN3-207ENST00000397200 RCC1LQ96I51 464 aaKnown RBP11.97□□□□□ -0.49
CAPN3-207ENST00000397200 GGACTQ9BVM4 153 aa11.97□□□□□ -0.49
CAPN3-207ENST00000397200 VSIRQ9H7M9 311 aa11.97□□□□□ -0.49
CAPN3-207ENST00000397200 SLC35D1Q9NTN3 355 aa11.97□□□□□ -0.49
CAPN3-207ENST00000397200 TMEM160Q9NX00 188 aa11.97□□□□□ -0.49
CAPN3-207ENST00000397200 REG1BP48304 166 aa11.97□□□□□ -0.49
CAPN3-207ENST00000397200 DIAPH2-AS1Q14236 149 aa11.97□□□□□ -0.49
CAPN3-207ENST00000397200 ICAM4Q14773 271 aa11.97□□□□□ -0.49
CAPN3-207ENST00000397200 LDLRAD2Q5SZI1 272 aa11.97□□□□□ -0.49
CAPN3-207ENST00000397200 OR5AN1Q8NGI8 311 aa11.97□□□□□ -0.49
CAPN3-207ENST00000397200 SFT2D1Q8WV19 159 aa11.97□□□□□ -0.49
CAPN3-207ENST00000397200 MALSU1Q96EH3 234 aa11.97□□□□□ -0.49
CAPN3-207ENST00000397200 WDR83OSQ9Y284 106 aa11.97□□□□□ -0.49
CAPN3-207ENST00000397200 ZNF257Q9Y2Q1 563 aa11.97□□□□□ -0.49
CAPN3-207ENST00000397200 HILPDAQ9Y5L2 63 aa11.97□□□□□ -0.49
CAPN3-207ENST00000397200 LOC105371267A0A1B0GV96 52 aa11.96□□□□□ -0.5
CAPN3-207ENST00000397200 HSPB1P04792 205 aaKnown RBP11.96□□□□□ -0.5
CAPN3-207ENST00000397200 SRP14P37108 136 aaKnown RBP11.96□□□□□ -0.5
CAPN3-207ENST00000397200 HSPE1P61604 102 aaKnown RBP11.96□□□□□ -0.5
CAPN3-207ENST00000397200 SSX2Q16385 188 aa11.96□□□□□ -0.5
CAPN3-207ENST00000397200 CCDC144NLQ6NUI1 221 aa11.96□□□□□ -0.5
CAPN3-207ENST00000397200 ACSM6Q6P461 480 aa11.96□□□□□ -0.5
CAPN3-207ENST00000397200 IL17RELQ6ZVW7 336 aa11.96□□□□□ -0.5
CAPN3-207ENST00000397200 SSX7Q7RTT5 188 aa11.96□□□□□ -0.5
CAPN3-207ENST00000397200 OSR1Q8TAX0 266 aaPredicted RBP11.96□□□□□ -0.5
CAPN3-207ENST00000397200 TMEM170AQ8WVE7 144 aa11.96□□□□□ -0.5
CAPN3-207ENST00000397200 C17orf50Q8WW18 174 aa11.96□□□□□ -0.5
CAPN3-207ENST00000397200 CLCC1Q96S66 551 aa11.96□□□□□ -0.5
CAPN3-207ENST00000397200 AIFM2Q9BRQ8 373 aa11.96□□□□□ -0.5
CAPN3-207ENST00000397200 NPCDR1Q9BY65 106 aa11.96□□□□□ -0.5
CAPN3-207ENST00000397200 BET1LQ9NYM9 111 aa11.96□□□□□ -0.5
CAPN3-207ENST00000397200 SVEP1Q4LDE5 3571 aa11.96□□□□□ -0.5
CAPN3-207ENST00000397200 HIVEP1P15822 2718 aa11.96□□□□□ -0.5
CAPN3-207ENST00000397200 A0A0U1RQK1 487 aa11.95□□□□□ -0.5
CAPN3-207ENST00000397200 LOC102723971A0A1B0GUV8 181 aa11.95□□□□□ -0.5
CAPN3-207ENST00000397200 A0A1B0GV50 99 aa11.95□□□□□ -0.5
CAPN3-207ENST00000397200 OOSP1A8MZH6 123 aa11.95□□□□□ -0.5
CAPN3-207ENST00000397200 H0YJW9 148 aa11.95□□□□□ -0.5
CAPN3-207ENST00000397200 UPK2O00526 184 aa11.95□□□□□ -0.5
CAPN3-207ENST00000397200 SOX15O60248 233 aa11.95□□□□□ -0.5
CAPN3-207ENST00000397200 MBP02144 154 aa11.95□□□□□ -0.5
CAPN3-207ENST00000397200 SRP19P09132 144 aaKnown RBP11.95□□□□□ -0.5
CAPN3-207ENST00000397200 FGF7P21781 194 aa11.95□□□□□ -0.5
CAPN3-207ENST00000397200 TMEM177Q53S58 311 aa11.95□□□□□ -0.5
CAPN3-207ENST00000397200 KHDC3LQ587J8 217 aa11.95□□□□□ -0.5
CAPN3-207ENST00000397200 OR10G4Q8NGN3 311 aa11.95□□□□□ -0.5
CAPN3-207ENST00000397200 RARRES2Q99969 163 aa11.95□□□□□ -0.5
CAPN3-207ENST00000397200 MRPL20Q9BYC9 149 aaKnown RBP11.95□□□□□ -0.5
CAPN3-207ENST00000397200 GSX1Q9H4S2 264 aaPredicted RBP11.95□□□□□ -0.5
CAPN3-207ENST00000397200 PRNDQ9UKY0 176 aa11.95□□□□□ -0.5
CAPN3-207ENST00000397200 IGHV1-3A0A0C4DH29 117 aa11.94□□□□□ -0.5
CAPN3-207ENST00000397200 TSPAN4O14817 238 aa11.94□□□□□ -0.5
CAPN3-207ENST00000397200 NUPL2O15504 423 aaKnown RBP11.94□□□□□ -0.5
CAPN3-207ENST00000397200 MPDU1O75352 247 aa11.94□□□□□ -0.5
CAPN3-207ENST00000397200 IGKV1D-33P01593 117 aa11.94□□□□□ -0.5
CAPN3-207ENST00000397200 IGKV1-33P01594 117 aa11.94□□□□□ -0.5
CAPN3-207ENST00000397200 APOA2P02652 100 aa11.94□□□□□ -0.5
CAPN3-207ENST00000397200 IGKV1-16P04430 117 aa11.94□□□□□ -0.5
CAPN3-207ENST00000397200 DLK1P80370 383 aa11.94□□□□□ -0.5
CAPN3-207ENST00000397200 DYNAPQ8N1N2 210 aa11.94□□□□□ -0.5
CAPN3-207ENST00000397200 AJUBAQ96IF1 538 aa11.94□□□□□ -0.5
CAPN3-207ENST00000397200 NABP2Q9BQ15 211 aa11.94□□□□□ -0.5
CAPN3-207ENST00000397200 HEYLQ9NQ87 328 aaPredicted RBP11.94□□□□□ -0.5
CAPN3-207ENST00000397200 SRRM4A7MD48 611 aaKnown RBP11.93□□□□□ -0.5
CAPN3-207ENST00000397200 RRHO14718 337 aa11.93□□□□□ -0.5
CAPN3-207ENST00000397200 FBP1P09467 338 aa11.93□□□□□ -0.5
CAPN3-207ENST00000397200 PAX6P26367 422 aa11.93□□□□□ -0.5
CAPN3-207ENST00000397200 C9orf139Q6ZV77 190 aa11.93□□□□□ -0.5
CAPN3-207ENST00000397200 Q71RC1 249 aaPredicted RBP11.93□□□□□ -0.5
CAPN3-207ENST00000397200 MOB3BQ86TA1 216 aa11.93□□□□□ -0.5
CAPN3-207ENST00000397200 PDPNQ86YL7 162 aa11.93□□□□□ -0.5
CAPN3-207ENST00000397200 RPP25LQ8N5L8 163 aaKnown RBP11.93□□□□□ -0.5
CAPN3-207ENST00000397200 A0A1W2PPI3 338 aa11.93□□□□□ -0.5
CAPN3-207ENST00000397200 FNDC10F2Z333 226 aa11.93□□□□□ -0.5
CAPN3-207ENST00000397200 NDUFS6O75380 124 aaKnown RBP11.93□□□□□ -0.5
CAPN3-207ENST00000397200 CD1BP29016 333 aa11.93□□□□□ -0.5
CAPN3-207ENST00000397200 HOXA1P49639 335 aaPredicted RBP11.93□□□□□ -0.5
CAPN3-207ENST00000397200 ELLP55199 621 aaPredicted RBP11.93□□□□□ -0.5
CAPN3-207ENST00000397200 PRCDQ00LT1 54 aa11.93□□□□□ -0.5
CAPN3-207ENST00000397200 TMEM88Q6PEY1 159 aa11.93□□□□□ -0.5
CAPN3-207ENST00000397200 ETV3LQ6ZN32 361 aa11.93□□□□□ -0.5
CAPN3-207ENST00000397200 CBLN2Q8IUK8 224 aa11.93□□□□□ -0.5
CAPN3-207ENST00000397200 C22orf15Q8WYQ4 148 aa11.93□□□□□ -0.5
CAPN3-207ENST00000397200 OR51B2Q9Y5P1 312 aa11.93□□□□□ -0.5
CAPN3-207ENST00000397200 SOX21Q9Y651 276 aaPredicted RBP11.93□□□□□ -0.5
CAPN3-207ENST00000397200 CTXND1A0A1B0GTU2 59 aa11.92□□□□□ -0.5
CAPN3-207ENST00000397200 MAP1LC3B2A6NCE7 125 aa11.92□□□□□ -0.5
CAPN3-207ENST00000397200 C17orf112F2Z3M2 114 aa11.92□□□□□ -0.5
CAPN3-207ENST00000397200 INS-IGF2F8WCM5 200 aa11.92□□□□□ -0.5
CAPN3-207ENST00000397200 TIMM23O14925 209 aa11.92□□□□□ -0.5
CAPN3-207ENST00000397200 KBTBD11O94819 623 aa11.92□□□□□ -0.5
CAPN3-207ENST00000397200 IFNA10P01566 189 aa11.92□□□□□ -0.5
CAPN3-207ENST00000397200 SAA1P0DJI8 122 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms