RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 IL6RP08887 468 aaPredicted RBP12.07□□□□□ -0.48
MKS1-202ENST00000393119 TAS2R30P59541 319 aa12.07□□□□□ -0.48
MKS1-202ENST00000393119 SPCS3P61009 180 aa12.07□□□□□ -0.48
MKS1-202ENST00000393119 CLDND2Q8NHS1 167 aa12.07□□□□□ -0.48
MKS1-202ENST00000393119 FAM216AQ8WUB2 273 aa12.07□□□□□ -0.48
MKS1-202ENST00000393119 RAB39BQ96DA2 213 aa12.07□□□□□ -0.48
MKS1-202ENST00000393119 CCL19Q99731 98 aa12.07□□□□□ -0.48
MKS1-202ENST00000393119 RARRES2Q99969 163 aa12.07□□□□□ -0.48
MKS1-202ENST00000393119 TEX50A0A1B0GTY4 177 aa12.07□□□□□ -0.48
MKS1-202ENST00000393119 UPK2O00526 184 aa12.07□□□□□ -0.48
MKS1-202ENST00000393119 SLC25A17O43808 307 aa12.07□□□□□ -0.48
MKS1-202ENST00000393119 HRASP01112 189 aa12.07□□□□□ -0.48
MKS1-202ENST00000393119 MLANAQ16655 118 aa12.07□□□□□ -0.48
MKS1-202ENST00000393119 LBHQ53QV2 105 aaPredicted RBP12.07□□□□□ -0.48
MKS1-202ENST00000393119 C19orf35Q6ZS72 473 aa12.07□□□□□ -0.48
MKS1-202ENST00000393119 HIPK2Q9H2X6 1198 aa12.07□□□□□ -0.48
MKS1-202ENST00000393119 PUS1Q9Y606 427 aaKnown RBP eCLIP12.07□□□□□ -0.48
MKS1-202ENST00000393119 H3BQ15 152 aa12.06□□□□□ -0.48
MKS1-202ENST00000393119 APOA2P02652 100 aa12.06□□□□□ -0.48
MKS1-202ENST00000393119 AARDQ4LEZ3 155 aa12.06□□□□□ -0.48
MKS1-202ENST00000393119 GFI1BQ5VTD9 330 aa12.06□□□□□ -0.48
MKS1-202ENST00000393119 ZNF343Q6P1L6 599 aa12.06□□□□□ -0.48
MKS1-202ENST00000393119 SSX7Q7RTT5 188 aa12.06□□□□□ -0.48
MKS1-202ENST00000393119 DYNAPQ8N1N2 210 aa12.06□□□□□ -0.48
MKS1-202ENST00000393119 GPR61Q9BZJ8 451 aa12.06□□□□□ -0.48
MKS1-202ENST00000393119 IGHV1-3A0A0C4DH29 117 aa12.06□□□□□ -0.48
MKS1-202ENST00000393119 ZNF727A8MUV8 499 aa12.06□□□□□ -0.48
MKS1-202ENST00000393119 SRP19P09132 144 aaKnown RBP12.06□□□□□ -0.48
MKS1-202ENST00000393119 ELLP55199 621 aaPredicted RBP12.06□□□□□ -0.48
MKS1-202ENST00000393119 LMO4P61968 165 aa12.06□□□□□ -0.48
MKS1-202ENST00000393119 HAGHQ16775 308 aa12.06□□□□□ -0.48
MKS1-202ENST00000393119 MRGPRG-AS1Q2M3A8 158 aa12.06□□□□□ -0.48
MKS1-202ENST00000393119 PCGF1Q9BSM1 259 aa12.06□□□□□ -0.48
MKS1-202ENST00000393119 INSIG2Q9Y5U4 225 aa12.06□□□□□ -0.48
MKS1-202ENST00000393119 IFNA5P01569 189 aa12.05□□□□□ -0.48
MKS1-202ENST00000393119 ZNF137PP52743 207 aa12.05□□□□□ -0.48
MKS1-202ENST00000393119 HSPE1P61604 102 aaKnown RBP12.05□□□□□ -0.48
MKS1-202ENST00000393119 LRRC75BQ2VPJ9 315 aa12.05□□□□□ -0.48
MKS1-202ENST00000393119 VMO1Q7Z5L0 202 aa12.05□□□□□ -0.48
MKS1-202ENST00000393119 OR5R1Q8NH85 324 aa12.05□□□□□ -0.48
MKS1-202ENST00000393119 TNFRSF14Q92956 283 aa12.05□□□□□ -0.48
MKS1-202ENST00000393119 PERPQ96FX8 193 aa12.05□□□□□ -0.48
MKS1-202ENST00000393119 RCC1LQ96I51 464 aaKnown RBP12.05□□□□□ -0.48
MKS1-202ENST00000393119 NEU1Q99519 415 aa12.05□□□□□ -0.48
MKS1-202ENST00000393119 WDR61Q9GZS3 305 aaKnown RBP12.05□□□□□ -0.48
MKS1-202ENST00000393119 FOXA2Q9Y261 457 aaPredicted RBP12.05□□□□□ -0.48
MKS1-202ENST00000393119 CGB1A6NKQ9 187 aa12.05□□□□□ -0.48
MKS1-202ENST00000393119 KBTBD11O94819 623 aa12.05□□□□□ -0.48
MKS1-202ENST00000393119 CA2P00918 260 aa12.05□□□□□ -0.48
MKS1-202ENST00000393119 PRRX1P54821 245 aa12.05□□□□□ -0.48
MKS1-202ENST00000393119 TMEM177Q53S58 311 aa12.05□□□□□ -0.48
MKS1-202ENST00000393119 ABCA12Q86UK0 2595 aa12.05□□□□□ -0.48
MKS1-202ENST00000393119 ZNF429Q86V71 674 aa12.05□□□□□ -0.48
MKS1-202ENST00000393119 C8orf31Q8N9H6 132 aa12.05□□□□□ -0.48
MKS1-202ENST00000393119 OR10P1Q8NGE3 313 aa12.05□□□□□ -0.48
MKS1-202ENST00000393119 UNKLQ9H9P5 680 aaKnown RBP12.05□□□□□ -0.48
MKS1-202ENST00000393119 WASHC3Q9Y3C0 194 aa12.05□□□□□ -0.48
MKS1-202ENST00000393119 USP9YO00507 2555 aaPredicted RBP12.04□□□□□ -0.48
MKS1-202ENST00000393119 RBFOX3A6NFN3 312 aa12.04□□□□□ -0.48
MKS1-202ENST00000393119 PPP1R2P9O14990 202 aa12.04□□□□□ -0.48
MKS1-202ENST00000393119 HMGB3O15347 200 aaKnown RBP12.04□□□□□ -0.48
MKS1-202ENST00000393119 IGKV1D-33P01593 117 aa12.04□□□□□ -0.48
MKS1-202ENST00000393119 IGKV1-33P01594 117 aa12.04□□□□□ -0.48
MKS1-202ENST00000393119 LGALS4P56470 323 aa12.04□□□□□ -0.48
MKS1-202ENST00000393119 KRTAP10-9P60411 292 aa12.04□□□□□ -0.48
MKS1-202ENST00000393119 HBG1P69891 147 aa12.04□□□□□ -0.48
MKS1-202ENST00000393119 HBG2P69892 147 aa12.04□□□□□ -0.48
MKS1-202ENST00000393119 POU2AF1Q16633 256 aa12.04□□□□□ -0.48
MKS1-202ENST00000393119 ABHD5Q8WTS1 349 aa12.04□□□□□ -0.48
MKS1-202ENST00000393119 ZNF430Q9H8G1 570 aaPredicted RBP12.04□□□□□ -0.48
MKS1-202ENST00000393119 KIAA1456Q9P272 454 aa12.04□□□□□ -0.48
MKS1-202ENST00000393119 SMCO3A2RU48 225 aa12.04□□□□□ -0.48
MKS1-202ENST00000393119 LY6LH3BQJ8 138 aa12.04□□□□□ -0.48
MKS1-202ENST00000393119 DFFBO76075 338 aa12.04□□□□□ -0.48
MKS1-202ENST00000393119 IGHV3-48P01763 117 aa12.04□□□□□ -0.48
MKS1-202ENST00000393119 REG1AP05451 166 aa12.04□□□□□ -0.48
MKS1-202ENST00000393119 ZNF674Q2M3X9 581 aa12.04□□□□□ -0.48
MKS1-202ENST00000393119 OR4C13Q8NGP0 309 aa12.04□□□□□ -0.48
MKS1-202ENST00000393119 SCGB1C1Q8TD33 95 aa12.04□□□□□ -0.48
MKS1-202ENST00000393119 TAF15Q92804 592 aaKnown RBP eCLIP12.04□□□□□ -0.48
MKS1-202ENST00000393119 RPEQ96AT9 228 aa12.04□□□□□ -0.48
MKS1-202ENST00000393119 RPRMQ9NS64 109 aa12.04□□□□□ -0.48
MKS1-202ENST00000393119 TGIF2-C20orf24A0A0A6YYL0 155 aa12.03□□□□□ -0.48
MKS1-202ENST00000393119 IGHV4-61A0A0C4DH41 118 aa12.03□□□□□ -0.48
MKS1-202ENST00000393119 BTBD17A6NE02 478 aa12.03□□□□□ -0.48
MKS1-202ENST00000393119 FAM90A9PA6NNJ1 464 aa12.03□□□□□ -0.48
MKS1-202ENST00000393119 TIMM23O14925 209 aa12.03□□□□□ -0.48
MKS1-202ENST00000393119 DLK1P80370 383 aa12.03□□□□□ -0.48
MKS1-202ENST00000393119 PAX2Q02962 417 aa12.03□□□□□ -0.48
MKS1-202ENST00000393119 TLE4Q04727 773 aa12.03□□□□□ -0.48
MKS1-202ENST00000393119 ZNF726P1Q15940 193 aa12.03□□□□□ -0.48
MKS1-202ENST00000393119 HIST2H2BCQ6DN03 193 aa12.03□□□□□ -0.48
MKS1-202ENST00000393119 OSR1Q8TAX0 266 aaPredicted RBP12.03□□□□□ -0.48
MKS1-202ENST00000393119 C1orf159Q96HA4 380 aa12.03□□□□□ -0.48
MKS1-202ENST00000393119 ZNF469Q96JG9 3925 aaPredicted RBP12.03□□□□□ -0.48
MKS1-202ENST00000393119 PTPN13Q12923 2485 aa12.03□□□□□ -0.48
MKS1-202ENST00000393119 ABCA2Q9BZC7 2435 aa12.03□□□□□ -0.48
MKS1-202ENST00000393119 IGHV3OR16-10A0A075B7F0 116 aa12.03□□□□□ -0.48
MKS1-202ENST00000393119 A0A1W2PPI3 338 aa12.03□□□□□ -0.48
MKS1-202ENST00000393119 FCN1O00602 326 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms