RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 HBE1P02100 147 aa9.17□□□□□ -0.94
SMARCAL1-203ENST00000392128 LGALS4P56470 323 aa9.17□□□□□ -0.94
SMARCAL1-203ENST00000392128 WT1-ASQ06250 92 aa9.17□□□□□ -0.94
SMARCAL1-203ENST00000392128 ARSJQ5FYB0 599 aaPredicted RBP9.17□□□□□ -0.94
SMARCAL1-203ENST00000392128 ACSM6Q6P461 480 aa9.17□□□□□ -0.94
SMARCAL1-203ENST00000392128 PERPQ96FX8 193 aa9.17□□□□□ -0.94
SMARCAL1-203ENST00000392128 SCRT1Q9BWW7 348 aa9.17□□□□□ -0.94
SMARCAL1-203ENST00000392128 TREM1Q9NP99 234 aa9.17□□□□□ -0.94
SMARCAL1-203ENST00000392128 FAM96BQ9Y3D0 163 aa9.17□□□□□ -0.94
SMARCAL1-203ENST00000392128 LSM4Q9Y4Z0 139 aaKnown RBP9.17□□□□□ -0.94
SMARCAL1-203ENST00000392128 TRAV20A0A0B4J274 112 aa9.17□□□□□ -0.94
SMARCAL1-203ENST00000392128 A0A1W2PRD5 423 aa9.17□□□□□ -0.94
SMARCAL1-203ENST00000392128 A0A1W2PRF3 423 aa9.17□□□□□ -0.94
SMARCAL1-203ENST00000392128 A0A1W2PRM7 423 aa9.17□□□□□ -0.94
SMARCAL1-203ENST00000392128 ACTL6BO94805 426 aa9.17□□□□□ -0.94
SMARCAL1-203ENST00000392128 MOSP00540 346 aa9.17□□□□□ -0.94
SMARCAL1-203ENST00000392128 COMPP49747 757 aaPredicted RBP9.17□□□□□ -0.94
SMARCAL1-203ENST00000392128 ELLP55199 621 aaPredicted RBP9.17□□□□□ -0.94
SMARCAL1-203ENST00000392128 RAB2AP61019 212 aa9.17□□□□□ -0.94
SMARCAL1-203ENST00000392128 PAX8Q06710 450 aa9.17□□□□□ -0.94
SMARCAL1-203ENST00000392128 SSX2Q16385 188 aa9.17□□□□□ -0.94
SMARCAL1-203ENST00000392128 MRPL41Q8IXM3 137 aaKnown RBP9.17□□□□□ -0.94
SMARCAL1-203ENST00000392128 SFT2D1Q8WV19 159 aa9.17□□□□□ -0.94
SMARCAL1-203ENST00000392128 MBD3L1Q8WWY6 194 aa9.17□□□□□ -0.94
SMARCAL1-203ENST00000392128 NRGNQ92686 78 aa9.17□□□□□ -0.94
SMARCAL1-203ENST00000392128 C12orf57Q99622 126 aa9.17□□□□□ -0.94
SMARCAL1-203ENST00000392128 TMEM231Q9H6L2 316 aa9.17□□□□□ -0.94
SMARCAL1-203ENST00000392128 CBY1Q9Y3M2 126 aa9.17□□□□□ -0.94
SMARCAL1-203ENST00000392128 KMT2BQ9UMN6 2715 aaPredicted RBP9.17□□□□□ -0.94
SMARCAL1-203ENST00000392128 A6NJY4 79 aa9.16□□□□□ -0.94
SMARCAL1-203ENST00000392128 IGKV1D-33P01593 117 aa9.16□□□□□ -0.94
SMARCAL1-203ENST00000392128 IGKV1-33P01594 117 aa9.16□□□□□ -0.94
SMARCAL1-203ENST00000392128 RPL27AP46776 148 aaKnown RBP9.16□□□□□ -0.94
SMARCAL1-203ENST00000392128 ZNF726P1Q15940 193 aa9.16□□□□□ -0.94
SMARCAL1-203ENST00000392128 TNXAQ16473 311 aa9.16□□□□□ -0.94
SMARCAL1-203ENST00000392128 GUK1Q16774 197 aa9.16□□□□□ -0.94
SMARCAL1-203ENST00000392128 DYNAPQ8N1N2 210 aa9.16□□□□□ -0.94
SMARCAL1-203ENST00000392128 NPBQ8NG41 125 aa9.16□□□□□ -0.94
SMARCAL1-203ENST00000392128 RCC1LQ96I51 464 aaKnown RBP9.16□□□□□ -0.94
SMARCAL1-203ENST00000392128 PBDC1Q9BVG4 233 aa9.16□□□□□ -0.94
SMARCAL1-203ENST00000392128 FBXL15Q9H469 300 aa9.16□□□□□ -0.94
SMARCAL1-203ENST00000392128 LPAR2Q9HBW0 351 aa9.16□□□□□ -0.94
SMARCAL1-203ENST00000392128 KIAA1456Q9P272 454 aa9.16□□□□□ -0.94
SMARCAL1-203ENST00000392128 ABCA2Q9BZC7 2435 aa9.16□□□□□ -0.94
SMARCAL1-203ENST00000392128 MAP1AP78559 2803 aaPredicted RBP9.16□□□□□ -0.94
SMARCAL1-203ENST00000392128 LINC00587B1AMM8 73 aa9.16□□□□□ -0.94
SMARCAL1-203ENST00000392128 TSPAN4O14817 238 aa9.16□□□□□ -0.94
SMARCAL1-203ENST00000392128 NBR2O15453 112 aa9.16□□□□□ -0.94
SMARCAL1-203ENST00000392128 NDUFA3O95167 84 aa9.16□□□□□ -0.94
SMARCAL1-203ENST00000392128 OPRK1P41145 380 aa9.16□□□□□ -0.94
SMARCAL1-203ENST00000392128 SUB1P53999 127 aaKnown RBP eCLIP9.16□□□□□ -0.94
SMARCAL1-203ENST00000392128 HNF4GQ14541 408 aa9.16□□□□□ -0.94
SMARCAL1-203ENST00000392128 PEA15Q15121 130 aa9.16□□□□□ -0.94
SMARCAL1-203ENST00000392128 FFAR4Q5NUL3 377 aa9.16□□□□□ -0.94
SMARCAL1-203ENST00000392128 C10orf91Q5T1B1 145 aa9.16□□□□□ -0.94
SMARCAL1-203ENST00000392128 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.16□□□□□ -0.94
SMARCAL1-203ENST00000392128 OR2T10Q8NGZ9 312 aa9.16□□□□□ -0.94
SMARCAL1-203ENST00000392128 MALSU1Q96EH3 234 aa9.16□□□□□ -0.94
SMARCAL1-203ENST00000392128 C1orf159Q96HA4 380 aa9.16□□□□□ -0.94
SMARCAL1-203ENST00000392128 MGST2Q99735 147 aa9.16□□□□□ -0.94
SMARCAL1-203ENST00000392128 FAM208BQ5VWN6 2430 aa9.16□□□□□ -0.94
SMARCAL1-203ENST00000392128 LRRK2Q5S007 2527 aa9.15□□□□□ -0.94
SMARCAL1-203ENST00000392128 IGLC7A0M8Q6 106 aa9.15□□□□□ -0.94
SMARCAL1-203ENST00000392128 OR13C7P0DN81 318 aa9.15□□□□□ -0.94
SMARCAL1-203ENST00000392128 CCL20P78556 96 aa9.15□□□□□ -0.94
SMARCAL1-203ENST00000392128 EBI3Q14213 229 aa9.15□□□□□ -0.94
SMARCAL1-203ENST00000392128 MMDQ15546 238 aa9.15□□□□□ -0.94
SMARCAL1-203ENST00000392128 TEPPQ6URK8 271 aa9.15□□□□□ -0.94
SMARCAL1-203ENST00000392128 RPP25LQ8N5L8 163 aaKnown RBP9.15□□□□□ -0.94
SMARCAL1-203ENST00000392128 ZNF114Q8NC26 417 aa9.15□□□□□ -0.94
SMARCAL1-203ENST00000392128 EAF1Q96JC9 268 aaPredicted RBP9.15□□□□□ -0.94
SMARCAL1-203ENST00000392128 GGTLC1Q9BX51 225 aa9.15□□□□□ -0.94
SMARCAL1-203ENST00000392128 SMDT1Q9H4I9 107 aa9.15□□□□□ -0.94
SMARCAL1-203ENST00000392128 KCNIP2Q9NS61 270 aa9.15□□□□□ -0.94
SMARCAL1-203ENST00000392128 PLXNB1O43157 2135 aa9.15□□□□□ -0.94
SMARCAL1-203ENST00000392128 VPS13CQ709C8 3753 aa9.15□□□□□ -0.94
SMARCAL1-203ENST00000392128 MED13LQ71F56 2210 aa9.15□□□□□ -0.94
SMARCAL1-203ENST00000392128 A0A1B0GV50 99 aa9.15□□□□□ -0.94
SMARCAL1-203ENST00000392128 SNRNP70P08621 437 aaKnown RBP9.15□□□□□ -0.94
SMARCAL1-203ENST00000392128 ADCYAP1P18509 176 aa9.15□□□□□ -0.94
SMARCAL1-203ENST00000392128 GPX4P36969 197 aaPredicted RBP9.15□□□□□ -0.94
SMARCAL1-203ENST00000392128 CD69Q07108 199 aa9.15□□□□□ -0.94
SMARCAL1-203ENST00000392128 ZNF787Q6DD87 383 aa9.15□□□□□ -0.94
SMARCAL1-203ENST00000392128 SSX7Q7RTT5 188 aa9.15□□□□□ -0.94
SMARCAL1-203ENST00000392128 RNASEH2CQ8TDP1 164 aaKnown RBP9.15□□□□□ -0.94
SMARCAL1-203ENST00000392128 CACNG8Q8WXS5 425 aa9.15□□□□□ -0.94
SMARCAL1-203ENST00000392128 AJUBAQ96IF1 538 aa9.15□□□□□ -0.94
SMARCAL1-203ENST00000392128 P2RX4Q99571 388 aa9.15□□□□□ -0.94
SMARCAL1-203ENST00000392128 SEC11CQ9BY50 192 aa9.15□□□□□ -0.94
SMARCAL1-203ENST00000392128 EIF5A2Q9GZV4 153 aaKnown RBP9.15□□□□□ -0.94
SMARCAL1-203ENST00000392128 APOC3P02656 99 aa9.14□□□□□ -0.95
SMARCAL1-203ENST00000392128 SLC25A16P16260 332 aa9.14□□□□□ -0.95
SMARCAL1-203ENST00000392128 SSBP2P81877 361 aaPredicted RBP9.14□□□□□ -0.95
SMARCAL1-203ENST00000392128 FLI1Q01543 452 aaPredicted RBP9.14□□□□□ -0.95
SMARCAL1-203ENST00000392128 PLGLAQ15195 96 aa9.14□□□□□ -0.95
SMARCAL1-203ENST00000392128 ACOT6Q3I5F7 207 aaPredicted RBP9.14□□□□□ -0.95
SMARCAL1-203ENST00000392128 PVRIGQ6DKI7 326 aa9.14□□□□□ -0.95
SMARCAL1-203ENST00000392128 TMEM144Q7Z5S9 345 aa9.14□□□□□ -0.95
SMARCAL1-203ENST00000392128 Q8N6K4 173 aa9.14□□□□□ -0.95
SMARCAL1-203ENST00000392128 OR10G4Q8NGN3 311 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms