RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 F2RP25116 425 aa9.98□□□□□ -0.81
CLCN6-205ENST00000376492 SUPT4H1P63272 117 aaKnown RBP9.98□□□□□ -0.81
CLCN6-205ENST00000376492 PPP1R1AQ13522 171 aa9.98□□□□□ -0.81
CLCN6-205ENST00000376492 IL34Q6ZMJ4 242 aa9.98□□□□□ -0.81
CLCN6-205ENST00000376492 MMD2Q8IY49 270 aa9.98□□□□□ -0.81
CLCN6-205ENST00000376492 VKORC1L1Q8N0U8 176 aa9.98□□□□□ -0.81
CLCN6-205ENST00000376492 C12orf45Q8N5I9 185 aaPredicted RBP9.98□□□□□ -0.81
CLCN6-205ENST00000376492 TMEM56Q96MV1 263 aa9.98□□□□□ -0.81
CLCN6-205ENST00000376492 OR2A7Q96R45 310 aa9.98□□□□□ -0.81
CLCN6-205ENST00000376492 MED28Q9H204 178 aa9.98□□□□□ -0.81
CLCN6-205ENST00000376492 TUBA4BQ9H853 241 aa9.98□□□□□ -0.81
CLCN6-205ENST00000376492 TMEM56-RWDD3S4R434 201 aa9.98□□□□□ -0.81
CLCN6-205ENST00000376492 TEX13DA0A0J9YY54 714 aaPredicted RBP9.97□□□□□ -0.81
CLCN6-205ENST00000376492 C3orf85A0A1B0GTC6 90 aa9.97□□□□□ -0.81
CLCN6-205ENST00000376492 A0A1B0GVG6 124 aa9.97□□□□□ -0.81
CLCN6-205ENST00000376492 MSGN1A6NI15 193 aa9.97□□□□□ -0.81
CLCN6-205ENST00000376492 H3BUA1 57 aa9.97□□□□□ -0.81
CLCN6-205ENST00000376492 ATG12O94817 140 aa9.97□□□□□ -0.81
CLCN6-205ENST00000376492 CDS2O95674 445 aa9.97□□□□□ -0.81
CLCN6-205ENST00000376492 HPRT1P00492 218 aa9.97□□□□□ -0.81
CLCN6-205ENST00000376492 TRGV3P03979 118 aa9.97□□□□□ -0.81
CLCN6-205ENST00000376492 SULT1A3P0DMM9 295 aa9.97□□□□□ -0.81
CLCN6-205ENST00000376492 SULT1A4P0DMN0 295 aa9.97□□□□□ -0.81
CLCN6-205ENST00000376492 UCP1P25874 307 aa9.97□□□□□ -0.81
CLCN6-205ENST00000376492 POU2AF1Q16633 256 aa9.97□□□□□ -0.81
CLCN6-205ENST00000376492 ADAD2Q8NCV1 583 aaKnown RBP9.97□□□□□ -0.81
CLCN6-205ENST00000376492 OR51H1Q8NH63 302 aa9.97□□□□□ -0.81
CLCN6-205ENST00000376492 TMEM167AQ8TBQ9 72 aa9.97□□□□□ -0.81
CLCN6-205ENST00000376492 TMEM222Q9H0R3 208 aa9.97□□□□□ -0.81
CLCN6-205ENST00000376492 HIPK2Q9H2X6 1198 aa9.97□□□□□ -0.81
CLCN6-205ENST00000376492 SLA2Q9H6Q3 261 aa9.97□□□□□ -0.81
CLCN6-205ENST00000376492 PLEKHA2Q9HB19 425 aa9.97□□□□□ -0.81
CLCN6-205ENST00000376492 ANKRD34BA5PLL1 514 aa9.96□□□□□ -0.82
CLCN6-205ENST00000376492 IZUMO1RA6ND01 250 aa9.96□□□□□ -0.82
CLCN6-205ENST00000376492 SSNA1O43805 119 aa9.96□□□□□ -0.82
CLCN6-205ENST00000376492 ACTL6BO94805 426 aa9.96□□□□□ -0.82
CLCN6-205ENST00000376492 KBTBD11O94819 623 aa9.96□□□□□ -0.82
CLCN6-205ENST00000376492 IL6RP08887 468 aaPredicted RBP9.96□□□□□ -0.82
CLCN6-205ENST00000376492 MAS1LP35410 378 aa9.96□□□□□ -0.82
CLCN6-205ENST00000376492 SYNJ2BPP57105 145 aa9.96□□□□□ -0.82
CLCN6-205ENST00000376492 CYCSP99999 105 aaKnown RBP9.96□□□□□ -0.82
CLCN6-205ENST00000376492 DEFA5Q01523 94 aa9.96□□□□□ -0.82
CLCN6-205ENST00000376492 TNXAQ16473 311 aa9.96□□□□□ -0.82
CLCN6-205ENST00000376492 TBC1D26Q86UD7 250 aa9.96□□□□□ -0.82
CLCN6-205ENST00000376492 GTSCR1Q86UQ5 136 aa9.96□□□□□ -0.82
CLCN6-205ENST00000376492 LGI3Q8N145 548 aa9.96□□□□□ -0.82
CLCN6-205ENST00000376492 OR5T1Q8NG75 326 aa9.96□□□□□ -0.82
CLCN6-205ENST00000376492 OR9G4Q8NGQ1 327 aa9.96□□□□□ -0.82
CLCN6-205ENST00000376492 OR4A5Q8NH83 315 aa9.96□□□□□ -0.82
CLCN6-205ENST00000376492 SRSF12Q8WXF0 261 aaKnown RBP9.96□□□□□ -0.82
CLCN6-205ENST00000376492 PLEKHA3Q9HB20 300 aa9.96□□□□□ -0.82
CLCN6-205ENST00000376492 BET1LQ9NYM9 111 aa9.96□□□□□ -0.82
CLCN6-205ENST00000376492 CACFD1Q9UGQ2 172 aa9.96□□□□□ -0.82
CLCN6-205ENST00000376492 TMED3Q9Y3Q3 217 aa9.96□□□□□ -0.82
CLCN6-205ENST00000376492 PCLOQ9Y6V0 5065 aa9.95□□□□□ -0.82
CLCN6-205ENST00000376492 PFDN1O60925 122 aa9.95□□□□□ -0.82
CLCN6-205ENST00000376492 FGF2P09038 288 aa9.95□□□□□ -0.82
CLCN6-205ENST00000376492 SLC25A6P12236 298 aa9.95□□□□□ -0.82
CLCN6-205ENST00000376492 NQO2P16083 231 aa9.95□□□□□ -0.82
CLCN6-205ENST00000376492 ZP3P21754 424 aa9.95□□□□□ -0.82
CLCN6-205ENST00000376492 VAMP1P23763 118 aa9.95□□□□□ -0.82
CLCN6-205ENST00000376492 KLF5Q13887 457 aaPredicted RBP9.95□□□□□ -0.82
CLCN6-205ENST00000376492 TMEM187Q14656 261 aa9.95□□□□□ -0.82
CLCN6-205ENST00000376492 IL17DQ8TAD2 202 aa9.95□□□□□ -0.82
CLCN6-205ENST00000376492 GLYATL2Q8WU03 294 aa9.95□□□□□ -0.82
CLCN6-205ENST00000376492 SPIN2AQ99865 258 aa9.95□□□□□ -0.82
CLCN6-205ENST00000376492 SPIN2BQ9BPZ2 258 aa9.95□□□□□ -0.82
CLCN6-205ENST00000376492 RANGRFQ9HD47 186 aaPredicted RBP9.95□□□□□ -0.82
CLCN6-205ENST00000376492 ZNF355PQ9NSJ1 428 aa9.95□□□□□ -0.82
CLCN6-205ENST00000376492 COMMD9Q9P000 198 aa9.95□□□□□ -0.82
CLCN6-205ENST00000376492 RPL8P62917 257 aaKnown RBP9.94□□□□□ -0.82
CLCN6-205ENST00000376492 ZNF585BQ52M93 769 aa9.94□□□□□ -0.82
CLCN6-205ENST00000376492 PHLDA2Q53GA4 152 aa9.94□□□□□ -0.82
CLCN6-205ENST00000376492 OR4A47Q6IF82 309 aa9.94□□□□□ -0.82
CLCN6-205ENST00000376492 LINC00322Q6ZN03 302 aaPredicted RBP9.94□□□□□ -0.82
CLCN6-205ENST00000376492 SSX9Q7RTT3 188 aa9.94□□□□□ -0.82
CLCN6-205ENST00000376492 AKAP14Q86UN6 197 aa9.94□□□□□ -0.82
CLCN6-205ENST00000376492 FAM219AQ8IW50 185 aa9.94□□□□□ -0.82
CLCN6-205ENST00000376492 TCTE3Q8IZS6 198 aa9.94□□□□□ -0.82
CLCN6-205ENST00000376492 TTC9CQ8N5M4 171 aa9.94□□□□□ -0.82
CLCN6-205ENST00000376492 LSM10Q969L4 123 aaKnown RBP9.94□□□□□ -0.82
CLCN6-205ENST00000376492 NEURL2Q9BR09 285 aa9.94□□□□□ -0.82
CLCN6-205ENST00000376492 SEC22CQ9BRL7 303 aa9.94□□□□□ -0.82
CLCN6-205ENST00000376492 A0A0G2JLM5 398 aa9.93□□□□□ -0.82
CLCN6-205ENST00000376492 C13orf42A0A1B0GVH6 325 aa9.93□□□□□ -0.82
CLCN6-205ENST00000376492 E7EUB6 86 aa9.93□□□□□ -0.82
CLCN6-205ENST00000376492 UPK2O00526 184 aa9.93□□□□□ -0.82
CLCN6-205ENST00000376492 S1PR2O95136 353 aa9.93□□□□□ -0.82
CLCN6-205ENST00000376492 IFNA21P01568 189 aa9.93□□□□□ -0.82
CLCN6-205ENST00000376492 TRBV12-3P01733 135 aa9.93□□□□□ -0.82
CLCN6-205ENST00000376492 SERPINE2P07093 398 aa9.93□□□□□ -0.82
CLCN6-205ENST00000376492 CSN3P07498 182 aa9.93□□□□□ -0.82
CLCN6-205ENST00000376492 GIPP09681 153 aaPredicted RBP9.93□□□□□ -0.82
CLCN6-205ENST00000376492 OR5AC1P0C628 307 aa9.93□□□□□ -0.82
CLCN6-205ENST00000376492 OR9G9P0C7N8 305 aa9.93□□□□□ -0.82
CLCN6-205ENST00000376492 PI3P19957 117 aa9.93□□□□□ -0.82
CLCN6-205ENST00000376492 LPAR6P43657 344 aa9.93□□□□□ -0.82
CLCN6-205ENST00000376492 RAP2BP61225 183 aa9.93□□□□□ -0.82
CLCN6-205ENST00000376492 C10orf55Q5SWW7 151 aa9.93□□□□□ -0.82
CLCN6-205ENST00000376492 LCN12Q6JVE5 192 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms