RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 KIR3DL3Q8N743 410 aa20.14■□□□□ 0.81
CTSA-203ENST00000372459 OR10W1Q8NGF6 305 aa20.14■□□□□ 0.81
CTSA-203ENST00000372459 ACTR3CQ9C0K3 210 aaPredicted RBP20.14■□□□□ 0.81
CTSA-203ENST00000372459 CFAP46Q8IYW2 2715 aa20.14■□□□□ 0.81
CTSA-203ENST00000372459 CTXND1A0A1B0GTU2 59 aa20.14■□□□□ 0.81
CTSA-203ENST00000372459 OPRK1P41145 380 aa20.14■□□□□ 0.81
CTSA-203ENST00000372459 FGF8P55075 233 aaPredicted RBP20.14■□□□□ 0.81
CTSA-203ENST00000372459 S100A12P80511 92 aa20.14■□□□□ 0.81
CTSA-203ENST00000372459 GNG13Q9P2W3 67 aa20.14■□□□□ 0.81
CTSA-203ENST00000372459 METTL1Q9UBP6 276 aaKnown RBP20.14■□□□□ 0.81
CTSA-203ENST00000372459 OR2C1O95371 312 aa20.13■□□□□ 0.81
CTSA-203ENST00000372459 RNASE2P10153 161 aaKnown RBP20.13■□□□□ 0.81
CTSA-203ENST00000372459 TPTE2P1Q5T6R2 138 aa20.13■□□□□ 0.81
CTSA-203ENST00000372459 MGST2Q99735 147 aa20.13■□□□□ 0.81
CTSA-203ENST00000372459 DPM3Q9P2X0 92 aa20.13■□□□□ 0.81
CTSA-203ENST00000372459 LSM4Q9Y4Z0 139 aaKnown RBP20.13■□□□□ 0.81
CTSA-203ENST00000372459 LOC102723971A0A1B0GUV8 181 aa20.12■□□□□ 0.81
CTSA-203ENST00000372459 PRB1P04280 392 aa20.12■□□□□ 0.81
CTSA-203ENST00000372459 TEPPQ6URK8 271 aa20.12■□□□□ 0.81
CTSA-203ENST00000372459 SLC25A22Q9H936 323 aa20.12■□□□□ 0.81
CTSA-203ENST00000372459 KCNIP2Q9NS61 270 aa20.12■□□□□ 0.81
CTSA-203ENST00000372459 A0A1W2PPI3 338 aa20.12■□□□□ 0.81
CTSA-203ENST00000372459 E7EUB6 86 aa20.12■□□□□ 0.81
CTSA-203ENST00000372459 CYB5BO43169 146 aa20.12■□□□□ 0.81
CTSA-203ENST00000372459 SMIM6P0DI80 62 aa20.12■□□□□ 0.81
CTSA-203ENST00000372459 ZFP36P26651 326 aaKnown RBP20.12■□□□□ 0.81
CTSA-203ENST00000372459 CEACAM3P40198 252 aa20.12■□□□□ 0.81
CTSA-203ENST00000372459 CYB561D1Q8N8Q1 229 aa20.12■□□□□ 0.81
CTSA-203ENST00000372459 GGTLC1Q9BX51 225 aa20.12■□□□□ 0.81
CTSA-203ENST00000372459 TPSG1Q9NRR2 321 aa20.12■□□□□ 0.81
CTSA-203ENST00000372459 MMD2Q8IY49 270 aa20.11■□□□□ 0.81
CTSA-203ENST00000372459 RNF5Q99942 180 aa20.11■□□□□ 0.81
CTSA-203ENST00000372459 BPESC1Q9GZL8 116 aa20.11■□□□□ 0.81
CTSA-203ENST00000372459 USP24Q9UPU5 2620 aa20.11■□□□□ 0.81
CTSA-203ENST00000372459 CGB1A6NKQ9 187 aa20.1■□□□□ 0.81
CTSA-203ENST00000372459 ODF3BA8MYP8 253 aa20.1■□□□□ 0.81
CTSA-203ENST00000372459 KLRD1Q13241 179 aa20.1■□□□□ 0.81
CTSA-203ENST00000372459 RAB31Q13636 194 aa20.1■□□□□ 0.81
CTSA-203ENST00000372459 PSG5Q15238 335 aa20.1■□□□□ 0.81
CTSA-203ENST00000372459 MRGPRG-AS1Q2M3A8 158 aa20.1■□□□□ 0.81
CTSA-203ENST00000372459 C10orf55Q5SWW7 151 aa20.1■□□□□ 0.81
CTSA-203ENST00000372459 HCP5Q6MZN7 132 aa20.1■□□□□ 0.81
CTSA-203ENST00000372459 SLC35E3Q7Z769 313 aa20.1■□□□□ 0.81
CTSA-203ENST00000372459 BBC3Q96PG8 261 aaPredicted RBP20.1■□□□□ 0.81
CTSA-203ENST00000372459 NIPSNAP3BQ9BS92 247 aa20.1■□□□□ 0.81
CTSA-203ENST00000372459 ARHGAP32A7KAX9 2087 aa20.1■□□□□ 0.81
CTSA-203ENST00000372459 ZFP92A6NM28 416 aa20.1■□□□□ 0.81
CTSA-203ENST00000372459 IFNA1P01562 189 aa20.1■□□□□ 0.81
CTSA-203ENST00000372459 CRYGBP07316 175 aa20.1■□□□□ 0.81
CTSA-203ENST00000372459 BCL2P10415 239 aa20.1■□□□□ 0.81
CTSA-203ENST00000372459 TVP23CQ96ET8 276 aa20.1■□□□□ 0.81
CTSA-203ENST00000372459 C1orf159Q96HA4 380 aa20.1■□□□□ 0.81
CTSA-203ENST00000372459 PMS2P11Q13670 270 aa20.09■□□□□ 0.81
CTSA-203ENST00000372459 PRSS8Q16651 343 aa20.09■□□□□ 0.81
CTSA-203ENST00000372459 LDLRAD2Q5SZI1 272 aa20.09■□□□□ 0.81
CTSA-203ENST00000372459 VMO1Q7Z5L0 202 aa20.09■□□□□ 0.81
CTSA-203ENST00000372459 IGFBPL1Q8WX77 278 aa20.09■□□□□ 0.81
CTSA-203ENST00000372459 TCEAL7Q9BRU2 100 aa20.09■□□□□ 0.81
CTSA-203ENST00000372459 SIGLEC9Q9Y336 463 aa20.09■□□□□ 0.81
CTSA-203ENST00000372459 PXMP4Q9Y6I8 212 aa20.09■□□□□ 0.81
CTSA-203ENST00000372459 ACTL6BO94805 426 aa20.08■□□□□ 0.81
CTSA-203ENST00000372459 CNTFRP26992 372 aa20.08■□□□□ 0.81
CTSA-203ENST00000372459 TAGLN2P37802 199 aaKnown RBP20.08■□□□□ 0.81
CTSA-203ENST00000372459 CDC34P49427 236 aaPredicted RBP20.08■□□□□ 0.81
CTSA-203ENST00000372459 RAB24Q969Q5 203 aa20.08■□□□□ 0.81
CTSA-203ENST00000372459 SPOCK3Q9BQ16 436 aa20.08■□□□□ 0.81
CTSA-203ENST00000372459 CXorf65A6NEN9 183 aa20.08■□□□□ 0.8
CTSA-203ENST00000372459 IGHV4-39P01824 125 aa20.08■□□□□ 0.8
CTSA-203ENST00000372459 RNF224P0DH78 156 aa20.08■□□□□ 0.8
CTSA-203ENST00000372459 PDLIM4P50479 330 aa20.08■□□□□ 0.8
CTSA-203ENST00000372459 SUB1P53999 127 aaKnown RBP eCLIP20.08■□□□□ 0.8
CTSA-203ENST00000372459 LCN2P80188 198 aa20.08■□□□□ 0.8
CTSA-203ENST00000372459 WT1-ASQ06250 92 aa20.08■□□□□ 0.8
CTSA-203ENST00000372459 MRPL41Q8IXM3 137 aaKnown RBP20.08■□□□□ 0.8
CTSA-203ENST00000372459 CCL19Q99731 98 aa20.08■□□□□ 0.8
CTSA-203ENST00000372459 SEC14L6B5MCN3 397 aa20.07■□□□□ 0.8
CTSA-203ENST00000372459 TIMM23O14925 209 aa20.07■□□□□ 0.8
CTSA-203ENST00000372459 MIC13Q5XKP0 118 aa20.07■□□□□ 0.8
CTSA-203ENST00000372459 TMEM144Q7Z5S9 345 aa20.07■□□□□ 0.8
CTSA-203ENST00000372459 HILPDAQ9Y5L2 63 aa20.07■□□□□ 0.8
CTSA-203ENST00000372459 HMGB3O15347 200 aaKnown RBP20.06■□□□□ 0.8
CTSA-203ENST00000372459 FABP9Q0Z7S8 132 aa20.06■□□□□ 0.8
CTSA-203ENST00000372459 RBMS3Q6XE24 437 aaKnown RBP20.06■□□□□ 0.8
CTSA-203ENST00000372459 IGHV2-70DA0A0C4DH43 119 aa20.06■□□□□ 0.8
CTSA-203ENST00000372459 YIF1AO95070 293 aa20.06■□□□□ 0.8
CTSA-203ENST00000372459 CEBPGP53567 150 aa20.06■□□□□ 0.8
CTSA-203ENST00000372459 B2MP61769 119 aa20.06■□□□□ 0.8
CTSA-203ENST00000372459 LMO4P61968 165 aa20.06■□□□□ 0.8
CTSA-203ENST00000372459 PAX2Q02962 417 aa20.06■□□□□ 0.8
CTSA-203ENST00000372459 CD69Q07108 199 aa20.06■□□□□ 0.8
CTSA-203ENST00000372459 TNXAQ16473 311 aa20.06■□□□□ 0.8
CTSA-203ENST00000372459 VAX2Q9UIW0 290 aa20.06■□□□□ 0.8
CTSA-203ENST00000372459 A0A1W2PPV4 95 aa20.05■□□□□ 0.8
CTSA-203ENST00000372459 B4DEV8 164 aa20.05■□□□□ 0.8
CTSA-203ENST00000372459 AP4M1O00189 453 aa20.05■□□□□ 0.8
CTSA-203ENST00000372459 VENTXO95231 258 aa20.05■□□□□ 0.8
CTSA-203ENST00000372459 RPL27AP46776 148 aaKnown RBP20.05■□□□□ 0.8
CTSA-203ENST00000372459 RPL29P47914 159 aaKnown RBP20.05■□□□□ 0.8
CTSA-203ENST00000372459 CTAG1AP78358 180 aa20.05■□□□□ 0.8
CTSA-203ENST00000372459 GCSAMLQ5JQS6 135 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms