RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 TRAV20A0A0B4J274 112 aa8.66□□□□□ -1.02
TRAPPC4-201ENST00000359005 UBE2L5PA0A1B0GUS4 154 aa8.66□□□□□ -1.02
TRAPPC4-201ENST00000359005 B4DSR2 109 aa8.66□□□□□ -1.02
TRAPPC4-201ENST00000359005 SLC25A17O43808 307 aa8.66□□□□□ -1.02
TRAPPC4-201ENST00000359005 CRLF1O75462 422 aa8.66□□□□□ -1.02
TRAPPC4-201ENST00000359005 IFNA1P01562 189 aa8.66□□□□□ -1.02
TRAPPC4-201ENST00000359005 H2AFB1P0C5Y9 115 aa8.66□□□□□ -1.02
TRAPPC4-201ENST00000359005 FGF7P21781 194 aa8.66□□□□□ -1.02
TRAPPC4-201ENST00000359005 GPX4P36969 197 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC4-201ENST00000359005 TAGLN2P37802 199 aaKnown RBP8.66□□□□□ -1.02
TRAPPC4-201ENST00000359005 HABP2Q14520 560 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC4-201ENST00000359005 PEA15Q15121 130 aa8.66□□□□□ -1.02
TRAPPC4-201ENST00000359005 PSG5Q15238 335 aa8.66□□□□□ -1.02
TRAPPC4-201ENST00000359005 TMEM41BQ5BJD5 291 aa8.66□□□□□ -1.02
TRAPPC4-201ENST00000359005 CENPVQ7Z7K6 275 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC4-201ENST00000359005 PPP1R27Q86WC6 154 aa8.66□□□□□ -1.02
TRAPPC4-201ENST00000359005 FAM213BQ8TBF2 198 aa8.66□□□□□ -1.02
TRAPPC4-201ENST00000359005 BSCL2Q96G97 398 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC4-201ENST00000359005 CXorf58Q96LI9 332 aa8.66□□□□□ -1.02
TRAPPC4-201ENST00000359005 NDUFA4L2Q9NRX3 87 aa8.66□□□□□ -1.02
TRAPPC4-201ENST00000359005 ZNRD1Q9P1U0 126 aa8.66□□□□□ -1.02
TRAPPC4-201ENST00000359005 METTL1Q9UBP6 276 aaKnown RBP8.66□□□□□ -1.02
TRAPPC4-201ENST00000359005 DOCK11Q5JSL3 2073 aa8.66□□□□□ -1.02
TRAPPC4-201ENST00000359005 TRAV3A0A0B4J244 114 aa8.65□□□□□ -1.02
TRAPPC4-201ENST00000359005 A0A1W2PPI3 338 aa8.65□□□□□ -1.02
TRAPPC4-201ENST00000359005 SMCO3A2RU48 225 aa8.65□□□□□ -1.02
TRAPPC4-201ENST00000359005 ANKRD34BA5PLL1 514 aa8.65□□□□□ -1.02
TRAPPC4-201ENST00000359005 SRRM4A7MD48 611 aaKnown RBP8.65□□□□□ -1.02
TRAPPC4-201ENST00000359005 C15orf62A8K5M9 175 aa8.65□□□□□ -1.02
TRAPPC4-201ENST00000359005 TIMM23O14925 209 aa8.65□□□□□ -1.02
TRAPPC4-201ENST00000359005 NBR2O15453 112 aa8.65□□□□□ -1.02
TRAPPC4-201ENST00000359005 CD5LO43866 347 aa8.65□□□□□ -1.02
TRAPPC4-201ENST00000359005 VENTXO95231 258 aa8.65□□□□□ -1.02
TRAPPC4-201ENST00000359005 ZP3P21754 424 aa8.65□□□□□ -1.02
TRAPPC4-201ENST00000359005 ZFP36P26651 326 aaKnown RBP8.65□□□□□ -1.02
TRAPPC4-201ENST00000359005 RPL27AP46776 148 aaKnown RBP8.65□□□□□ -1.02
TRAPPC4-201ENST00000359005 BPIFB3P59826 476 aa8.65□□□□□ -1.02
TRAPPC4-201ENST00000359005 PAX2Q02962 417 aa8.65□□□□□ -1.02
TRAPPC4-201ENST00000359005 HES1Q14469 280 aa8.65□□□□□ -1.02
TRAPPC4-201ENST00000359005 PRSS8Q16651 343 aa8.65□□□□□ -1.02
TRAPPC4-201ENST00000359005 TMEM249Q2WGJ8 235 aa8.65□□□□□ -1.02
TRAPPC4-201ENST00000359005 ACOT6Q3I5F7 207 aaPredicted RBP8.65□□□□□ -1.02
TRAPPC4-201ENST00000359005 TEPPQ6URK8 271 aa8.65□□□□□ -1.02
TRAPPC4-201ENST00000359005 BTNL8Q6UX41 500 aa8.65□□□□□ -1.02
TRAPPC4-201ENST00000359005 PCNPQ8WW12 178 aaKnown RBP8.65□□□□□ -1.02
TRAPPC4-201ENST00000359005 SLC35E1Q96K37 410 aa8.65□□□□□ -1.02
TRAPPC4-201ENST00000359005 HRH4Q9H3N8 390 aa8.65□□□□□ -1.02
TRAPPC4-201ENST00000359005 ZNF430Q9H8G1 570 aaPredicted RBP8.65□□□□□ -1.02
TRAPPC4-201ENST00000359005 YAE1D1Q9NRH1 226 aa8.65□□□□□ -1.02
TRAPPC4-201ENST00000359005 SIGLEC9Q9Y336 463 aa8.65□□□□□ -1.02
TRAPPC4-201ENST00000359005 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.65□□□□□ -1.034e-7■■■■□ 19.9
TRAPPC4-201ENST00000359005 IGHV4-61A0A0C4DH41 118 aa8.64□□□□□ -1.03
TRAPPC4-201ENST00000359005 PMS2P5A8MQ11 134 aa8.64□□□□□ -1.03
TRAPPC4-201ENST00000359005 RRHO14718 337 aa8.64□□□□□ -1.03
TRAPPC4-201ENST00000359005 SCGB2A1O75556 95 aa8.64□□□□□ -1.03
TRAPPC4-201ENST00000359005 CNIH1O95406 144 aa8.64□□□□□ -1.03
TRAPPC4-201ENST00000359005 MT-CO2P00403 227 aa8.64□□□□□ -1.03
TRAPPC4-201ENST00000359005 CA2P00918 260 aa8.64□□□□□ -1.03
TRAPPC4-201ENST00000359005 IGLV2-23P01705 113 aa8.64□□□□□ -1.03
TRAPPC4-201ENST00000359005 PPT1P50897 306 aa8.64□□□□□ -1.03
TRAPPC4-201ENST00000359005 AKR1C1Q04828 323 aa8.64□□□□□ -1.03
TRAPPC4-201ENST00000359005 PAX8Q06710 450 aa8.64□□□□□ -1.03
TRAPPC4-201ENST00000359005 MMDQ15546 238 aa8.64□□□□□ -1.03
TRAPPC4-201ENST00000359005 TNXAQ16473 311 aa8.64□□□□□ -1.03
TRAPPC4-201ENST00000359005 SPINK9Q5DT21 86 aa8.64□□□□□ -1.03
TRAPPC4-201ENST00000359005 TEX29Q8N6K0 151 aa8.64□□□□□ -1.03
TRAPPC4-201ENST00000359005 NPBQ8NG41 125 aa8.64□□□□□ -1.03
TRAPPC4-201ENST00000359005 LYPD6BQ8NI32 183 aa8.64□□□□□ -1.03
TRAPPC4-201ENST00000359005 NARS2Q96I59 477 aaKnown RBP8.64□□□□□ -1.03
TRAPPC4-201ENST00000359005 C19orf24Q9BVV8 132 aa8.64□□□□□ -1.03
TRAPPC4-201ENST00000359005 ACTR3CQ9C0K3 210 aaPredicted RBP8.64□□□□□ -1.03
TRAPPC4-201ENST00000359005 WDR83OSQ9Y284 106 aa8.64□□□□□ -1.03
TRAPPC4-201ENST00000359005 HILPDAQ9Y5L2 63 aa8.64□□□□□ -1.03
TRAPPC4-201ENST00000359005 TRAV1-1A0A0B4J248 108 aa8.63□□□□□ -1.03
TRAPPC4-201ENST00000359005 RNASEK-C17orf49H0YIS7 233 aa8.63□□□□□ -1.03
TRAPPC4-201ENST00000359005 J3QLI3 93 aa8.63□□□□□ -1.03
TRAPPC4-201ENST00000359005 NPFFO15130 113 aa8.63□□□□□ -1.03
TRAPPC4-201ENST00000359005 MSMBP08118 114 aa8.63□□□□□ -1.03
TRAPPC4-201ENST00000359005 IGHV4-31P0DP07 118 aa8.63□□□□□ -1.03
TRAPPC4-201ENST00000359005 OPRK1P41145 380 aa8.63□□□□□ -1.03
TRAPPC4-201ENST00000359005 LOXL1Q08397 574 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC4-201ENST00000359005 ARL16Q0P5N6 197 aa8.63□□□□□ -1.03
TRAPPC4-201ENST00000359005 DIAPH2-AS1Q14236 149 aa8.63□□□□□ -1.03
TRAPPC4-201ENST00000359005 SSX2Q16385 188 aa8.63□□□□□ -1.03
TRAPPC4-201ENST00000359005 ZNF114Q8NC26 417 aa8.63□□□□□ -1.03
TRAPPC4-201ENST00000359005 NANPQ8TBE9 248 aa8.63□□□□□ -1.03
TRAPPC4-201ENST00000359005 NPCDR1Q9BY65 106 aa8.63□□□□□ -1.03
TRAPPC4-201ENST00000359005 SH3BGRL3Q9H299 93 aa8.63□□□□□ -1.03
TRAPPC4-201ENST00000359005 TREM1Q9NP99 234 aa8.63□□□□□ -1.03
TRAPPC4-201ENST00000359005 SLC39A9Q9NUM3 307 aa8.63□□□□□ -1.03
TRAPPC4-201ENST00000359005 IGHV3-72A0A0B4J1Y9 119 aa8.62□□□□□ -1.03
TRAPPC4-201ENST00000359005 A0A1B0GW64 132 aa8.62□□□□□ -1.03
TRAPPC4-201ENST00000359005 A0A1W2PPV4 95 aa8.62□□□□□ -1.03
TRAPPC4-201ENST00000359005 NDUFA3O95167 84 aa8.62□□□□□ -1.03
TRAPPC4-201ENST00000359005 IGKV1D-33P01593 117 aa8.62□□□□□ -1.03
TRAPPC4-201ENST00000359005 IGKV1-33P01594 117 aa8.62□□□□□ -1.03
TRAPPC4-201ENST00000359005 FABP1P07148 127 aa8.62□□□□□ -1.03
TRAPPC4-201ENST00000359005 CRYGBP07316 175 aa8.62□□□□□ -1.03
TRAPPC4-201ENST00000359005 OR13C7P0DN81 318 aa8.62□□□□□ -1.03
TRAPPC4-201ENST00000359005 TMEM11P17152 192 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms